Syngnathoides biaculeatus (alligator pipefish): 133508410
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Entry
133508410 CDS
T09681
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia02010
ABC transporters
sbia04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133508410
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133508410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbia02000
]
133508410
Transporters [BR:
sbia02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
133508410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
NDK
Motif
Other DBs
NCBI-GeneID:
133508410
NCBI-ProteinID:
XP_061690396
LinkDB
All DBs
Position
11:31104237..31129826
Genome browser
AA seq
2305 aa
AA seq
DB search
MSRRTQLTLLLWKNFTYRRRQKLQLLVEIVWPLFIFVILIAVRLSYPPYEQHQCHFPNKA
MPSAGTLPWIQGILCNANNPCFRSPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
NLDGFKELARALGKLQSTRTGFKLKHFLRDEETLSSFLLRNASLPASVVDQLLEADVNLE
KVLLRGFGVRLRDACPRRPGGLAVRDFVEIADPLAAVMVQEVVCRAPPAWLDQAELHFLD
DVDFLKPILRDARSDPDAVQDVSMATNKLLDSLGSLAVELAGMKSWMDLRKEIVFLTRNA
TSSPSAMYQAVSRIVCGHPEGGGLQIKSLNWYEDSNYKALFGNHNSSEDDAAQHYDNSSS
PFCNSLVRNMDSNPMSRMIWEAVKPLLMGKILYTPDTPATQRVIHQVNRTFQELGVFRDL
EGMWKEMRPKVWNFLENSEQMNLIRSLLKNNATATYFHAQLADTDWTVADVSDFLSRHAD
RHRLTSGALTWRDVFNETDQAVTSISRFMECVNLDKLEPVSTEEHMINESMVLLEDRKFW
AGIVFPDVATNATELPPVMSYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYIWGGF
SYLQDVIEHALVRAMTDTKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMFSVS
IILKSVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISAGLLVLMLKKGNLLPYS
DSGVVFLFLASFAVVTIMQCFLLSTAFARANLAAACGGIIYFTLYLPYVLCVAWQDHIGF
GTKVFASLLSPVAFGFGCEYFALFEEQGVGIQWKNLVASPLEEDDFSLRTAIIIMYFDSF
LYGLLTWYIEAVFPGQYGIPRPWFFPFTKSYWFGDKENKSNKVPLKYKGNRSAVCTEEEP
AHLDPGVYIENLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPP
TSGTAYILGRDIRTELSAIRQSLGVCPQHNVLFSMLTVEEHIWFYAQLKGLSEEQVKGEM
EQILHDTGLPHKRKSKTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWD
LLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKK
DPEPSLSSYRNSSSTVSFTKKVPYPRATFHSRAARPTSLLVRLQDENGSVSSSDAGLGSE
QESDAATVETGKAASGCDAPLSPVDTSRVSALILRHIPAARMVEDLGHELTFVLPYSAAK
DGAFVELFREMDEKLSDLNISSYGVSDTTLEEIFLKVAEDNGVDTDVPSDGTLPVRRRRR
RAHAFGGSDPQSCLRPLTDEHDDDASDVDPESRETDRLKCVGGKGSEKVSGWNLRKQQFV
ALMWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPNLELQPWMYEDQVTF
ISDDAPGDATMQKLLSSLLDPPGLGTRCMLGHPVPDAPCTMGDDDWSAPEVPESVRRLFV
SGNWTMEDPSPACLCSCDGRKKMLPECPAGAGGMPPPEMKVSSTDTLQNLTGRNVSDYLV
KTYAQIIGKSLKNKVWVNEFRYGGFSLGARSTQVLPPAAEIDDAIRRIRKIFEVPKGAAA
DRFLDNLSAFINGLDTKNNVKIWFNNKGWHSMGSFMNVMSNAILRANLPPGKDAARFGIR
AFNHPLNLTKEQLSQVALVTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHMHFI
SGVHPLLYWSANFIWDMCNYVVPATLVIVIFVCFQQKAYVSSTNLPVLALLLLLYGWSIT
PLMYPASFVFSIPSTAYVVLTSVNILIGINGSISTFVMELFGDHEIGGINDILKNVLLIF
PHFCLGRGLIDMVKNQAMADALQRFGENRLRSPLEWDMVGKNLFAMALEGVVFFIITVLI
QYRFCVKPRPTSHMGKLGVLGEEDEDVARERQRIVHGLGHGHILELRQLTKVFKRKQKPA
VDRLCVGIPPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGEAFLAGKSILRELDQVHQNM
GYCPQFDAVNELLTGREHLELYAILRGVPGEEVCDVAEWGIRRLGLLKYADKATGSYSGG
NLRKLSTAMALIGAPPVVFLDEPTTGMDPKARRALWNCILGVVKEGRSVVLTSHSMEECE
ALCTRMAIMVNGRFKCLGSVQHLKNRFGDGYTIVLRVAGPDPDLVPVMKFIESELSGSAL
KEKHGNMLQYQLPSTRGSLTHIFSTLADNKQALNIQDYSVTQTTLDQVFVNFAKDQSDDY
HHSKDIPFSSSSTKRRPGRPDESAV
NT seq
6918 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcggacgcagctgactctgctgctatggaagaacttcacatacagacgtagg
caaaagctgcagctgctggtggagatcgtgtggccgctcttcatcttcgtcatcctcatc
gccgtgcgcctcagctacccgccgtacgagcagcaccaatgtcacttccccaacaaggcc
atgccctcggcgggcacgttgccatggatacagggcatcctgtgcaacgccaacaacccg
tgcttccgcagccccacgccgggcgagtcgcccggcgtcgtcgggaacttcaatgactcc
ataatctctcgcctgttctccgacgccaagaagattcttctgtacagtcagaacgacaaa
aatttggacggctttaaggagctcgcacgtgccctcgggaaactccagagcaccagaaca
ggcttcaagttaaagcacttcctgcgggatgaggagactttgtccagcttcctgttgagg
aacgcctccttgcctgcgtctgtggtggaccagctcctggaggccgacgtgaacttggag
aaggtcctcctgagaggtttcggggtccgtttgcgggacgcgtgtccccgcaggcccggg
ggcctggccgtgcgggacttcgtggagatcgcggaccccctggccgccgtgatggtgcag
gaagtggtgtgccgggcgccgccggcgtggctcgaccaggccgagcttcacttcctagac
gacgtggacttcctcaaacccatcctgagggacgcccgatcggaccctgacgccgtccag
gatgtttctatggcaaccaacaagctgctggacagtctgggatccctggccgtggagctg
gccggcatgaaaagctggatggacctgaggaaggagatcgtcttcctgacgcgcaacgcc
acgtcctcgcccagcgccatgtaccaagccgtgtcgcgcatcgtgtgtggccacccggag
ggcggcggtctgcagatcaaatccctcaactggtacgaggacagcaactacaaggcgctc
ttcgggaaccacaacagcagcgaggacgacgccgcgcagcactacgacaactcctcatct
cctttctgcaacagtctggtgaggaacatggattccaaccccatgtccaggatgatatgg
gaagcggtgaagccactattgatggggaaaatcctctacactcccgacactcctgccacc
cagagggttatccaccaggtcaaccggacgttccaggagttaggcgtgttcagggacttg
gaaggaatgtggaaggagatgcgacccaaagtttggaacttcctggagaacagcgaacag
atgaacctgatccggtccctgctgaaaaacaacgcgaccgccacctacttccacgcgcaa
ttggccgacaccgactggacagtggccgacgtctccgacttcctgtccaggcacgccgac
cggcatcgactgacgagcggagccctcacctggagagacgtcttcaatgagaccgatcag
gccgtcaccagcatctcccgtttcatggagtgcgtgaatctggacaaactggagcccgtc
tcgaccgaggagcacatgatcaacgagtcgatggtcctgctggaggacaggaagttctgg
gccgggatcgtcttcccggacgtcgccaccaatgccacagagctcccccccgtcatgagc
tacaaaatccgtatggacatcgacaacgtggagcggaccaataagatcaaagacgcgtac
tgggacccgggtcctcgcgctgacccttttgaggacatgcgctacatctggggagggttc
tcctacctgcaagacgtcatcgagcacgcccttgtccgagccatgaccgacaccaaagag
aagacgggagtctacatccagcagatgccgtacccgtgctacgtggacgacatcttcctg
cgggtcatgagccgctccatgccgctcttcatgaccctggcctggatgttctccgtgtcc
atcattctgaagagtgtggtgtacgagaaggaggcacgtctgaaggagaccatgaggatc
atgggattagacaacggcatcctgtggttcagctggttcatcagcagtctgattcctctg
ctcatcagtgctggactcctggtgttgatgctcaagaaaggaaacttgctgccatacagc
gacagcggcgtcgtcttcctcttcctggcgtcttttgccgtggtgaccatcatgcagtgc
tttctcctcagcacggcattcgctcgagccaatttggctgctgcctgtggaggaatcatc
tacttcacgctgtacttgccctacgtactctgcgtggcctggcaggaccacatcgggttt
ggcaccaaagtctttgccagcctcctgtcgcctgtggcttttgggttcggctgcgagtac
tttgctctcttcgaagagcagggcgttggcatccagtggaagaacctggtggcgagtccc
ctggaggaagacgacttcagcctccgcaccgccattatcatcatgtattttgactccttc
ctttacgggctcctcacctggtacatcgaagccgtctttccaggtcaatacggaattcct
cggccgtggttcttccccttcaccaagtcctactggtttggagacaaggagaataaatcc
aacaaagtgcctctgaaatacaaaggaaaccgcagtgcggtgtgcacggaagaggagccg
gctcatctcgaccccggcgtctacatcgagaatctggtgaaggtttaccggcacggaaag
aagctggcggtggacggactgacgctgggcttctacgagggacagatcacctccttcctg
ggacataacggcgcaggaaagaccaccaccatgtccatcctcaccggcctgttcccaccc
acctccggtacagcctacattctgggtcgagacatccgcacggagctgagcgccatcagg
cagagtctgggcgtctgccctcaacacaacgtcctcttcagcatgttgactgtggaagag
cacatctggttctacgctcaactcaaaggcctgtcggaggagcaggtgaagggggagatg
gagcagatcctccacgatactggcctgccacacaaacgcaagtccaagaccagcaccttg
tccggcggcatgcagaggaagctgtctgtcgctctcgccttcgtcgggggttcgaaggtg
gtcatcctggacgagcccacggccggagtcgatccctacgcccggaggggaatctgggat
ctgctgctgaagtatcggcagggacgcaccatcatcctgtccacgcaccacatggacgag
gccgacatcctgggcgaccggatcgccatcatctcgcacggcaagttgtgctgtgtcggg
tcctcgctcttcctcaaaaaccagctggggacgggctactacctgaccctggtcaagaag
gaccccgaaccctcgctcagctcctacaggaactcgtccagcaccgtgtcctttaccaag
aaggtcccgtacccccgggctacttttcattcacgagcggctcgacccacgagtcttctg
gttcgattgcaggacgagaacggttccgtcagcagcagtgacgccggactggggagcgag
caggaaagtgacgccgccaccgtcgaaaccgggaaggcggcgtcggggtgcgacgcgccc
ctctcgccggtggatacgtcccgggtgtcggctctgatcctgcgccacatccccgccgcc
cgcatggtggaggacctcggccacgagctgaccttcgtgctgccgtactctgcagccaag
gacggagcctttgtagagcttttcagggaaatggacgaaaagctgagcgacttgaacatc
tccagttacggcgtgtccgacaccaccttggaggagattttcctgaaagtggctgaagat
aacggcgtggacacagacgtgccctcggacggcacgcttcctgtgcgccgccgccgccga
cgggcccacgccttcggaggaagcgaccctcagagttgcctgagaccgttgactgacgag
cacgacgacgacgcgtccgacgtcgatcccgagagtcgtgaaacggaccgcttgaagtgt
gtcggcgggaaggggtcggagaaagtgagcggctggaatctgaggaaacagcaatttgtg
gcgctcatgtggaaacgatttctttacgcccgacgctcccgcaaaggtttctttgcccag
atcgtccttcccgccgtcttcgtctgcatcgcgctcgtcttcagcctaatcgtccctcct
ttcgggaaatatcccaatttggagctgcagccctggatgtacgaagaccaggtcaccttc
atcagtgacgacgcgccaggagacgccaccatgcagaaattgctgagttcgcttttggac
ccgccgggactggggacgcgttgcatgctgggacatcccgtccccgacgcgccgtgcaca
atgggcgacgacgactggagcgccccggaggtcccggagagtgtccggcgactgtttgtg
tccgggaactggactatggaggacccgtctcccgcctgcttgtgcagctgcgacggcagg
aagaagatgctgcccgagtgccccgccggagccggcggaatgcccccgcccgagatgaag
gtgagttccacagacacgctgcagaacctgaccgggagaaacgtctcggactacctggtc
aagacttacgctcaaatcatcggcaagagtttgaagaacaaagtttgggtcaacgagttc
aggtacggaggcttctcgttgggcgccaggagcacgcaggtcctgcccccggccgccgag
atcgacgacgccatccggcgcatccgcaaaatcttcgaagtcccgaagggagccgcggcc
gatcgatttctggacaatttgtcggctttcatcaacggtttggacaccaaaaacaacgtc
aagatctggttcaacaacaaaggctggcacagcatgggctccttcatgaacgtgatgagc
aacgccatcctgagggccaacctccctcccgggaaggacgccgcccgcttcggcatccgg
gccttcaatcacccgctcaacctgaccaaggagcaactgtcccaggtggcgctggtgacc
acctcggtggacgtgctggtgtccatctgcgtgatcttcgccatgtccttcgtcccggcc
agctttgtggttttcctcatccaggagcgcgtgagcaaagccaagcacatgcacttcatc
agcggcgtgcaccccctcctctactggagcgccaacttcatctgggacatgtgcaactac
gtcgtcccggcaacgctggtcatcgtcatcttcgtgtgtttccaacaaaaagcttacgtc
tcgtccacaaaccttcccgtgctcgctctgctactcctgctctacgggtggtcgatcacg
ccgctgatgtacccggcgtcgttcgtcttcagcatccccagcacggcctacgtggtcctc
accagcgtcaacatcctcatcggcatcaacgggagcatctccacctttgtcatggagctc
ttcggagaccacgagatcggcggcatcaacgacatcctgaagaacgtcctcctcatcttc
ccgcacttctgtttgggccgaggcctcatcgacatggtcaagaaccaggccatggccgac
gcgctgcagagatttggagagaacaggctgcgttctcctctggagtgggacatggtgggc
aagaatttgtttgccatggcgctggagggtgtcgtcttcttcatcatcaccgtcctcata
cagtacaggttctgcgtcaaacccaggccaacgagtcatatgggcaaactgggagttctg
ggagaggaagacgaggacgtcgcccgcgagaggcagcggatcgtacacggactcgggcac
ggacacattctggaactccgacaactcacaaaagtgttcaaaaggaaacagaaaccggca
gtcgatcgactttgcgtcggaattcctcccggagagtgttttggcctgctgggcgtgaac
ggcgcaggaaagaccaccaccttcaaaatgctgacaggcgacaccacggtgaccagcggg
gaggccttcctggctgggaagagcatcctgcgggagctggaccaggtccaccagaacatg
ggctactgtccgcagttcgacgccgtcaacgagctgcttacgggccgagaacatctcgag
ctctacgccatcctcagaggcgttcccggcgaggaagtgtgcgacgtggccgagtggggc
atcaggagattgggcctgctcaagtacgccgacaaagcgacaggaagttacagtggcggt
aatctgcgcaaactgtccaccgccatggcgcttatcggcgcgccgcccgtcgtcttcctg
gacgagccaaccacgggcatggaccccaaagcccgccgagcgctctggaactgcatcctc
ggggtcgtcaaggagggacgctccgtggtgctcacctcgcacagtatggaggagtgtgag
gccttgtgcacccgcatggccatcatggtgaacggcaggttcaaatgtctcggcagcgtc
caacatttgaagaacaggttcggcgacggatacaccatcgtgctgcgcgtggcggggccc
gaccccgatctggttcccgtcatgaagttcatcgagagcgagctgagcggcagcgcgctg
aaggagaaacacggaaacatgctgcagtaccagctgccgtccacgcggggctctctcacg
cacattttctccacgctagccgacaacaaacaggccctcaacatccaagactactcggtc
acgcagaccacactggaccaggttttcgtgaacttcgccaaggaccaaagtgacgactat
catcactccaaagacattcccttttcctcttcctcaacaaagcggcgcccgggaagaccc
gacgagagcgccgtgtga
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integrated database retrieval system
