Syngnathoides biaculeatus (alligator pipefish): 133508448
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Entry
133508448 CDS
T09681
Symbol
slit3
Name
(RefSeq) slit homolog 3 protein isoform X1
KO
K06850
slit 3
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sbia00536
]
133508448 (slit3)
Glycosaminoglycan binding proteins [BR:
sbia00536
]
Heparan sulfate / Heparin
Axon guidance molecules
133508448 (slit3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
LRRNT
Laminin_G_1
LRR_9
hEGF
EGF_TEN
LRR_14
LRRCT
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
EGF_3
LRR_NXF1-5
LRR_EndoS
LRRCT_2
Motif
Other DBs
NCBI-GeneID:
133508448
NCBI-ProteinID:
XP_061690502
LinkDB
All DBs
Position
11:11367664..11674773
Genome browser
AA seq
1533 aa
AA seq
DB search
MAPGAQPSRLWALRLALVLVLSAVSGAYACPHKCSCSGSHVDCQGLGLKTVPKGIPRGAE
RLDLNRNNITRITKVDFSGIKNLRILHLEDNQISVVERGAFQDLRLLERLRLNRNRLMLL
PELLFQSNPKLGRLDLSENQIQAVPRKAFRGITNVKNLQLDSNHISCIEDGAFRALRDLE
ILTLNNNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHLSWLSDWLRARRGLAPFTQCMA
PAHMRGLNVPDVQKKDFLCGGPAHAEPRTCTPLVAVCPPSCTCNNNIVDCRRKSLTEIPA
NLPDGIVEIRLEQNLIKSVPPGAFSSYKKLKRIDLSKNQIFDIAADAFSGLRSLTSLVLY
GNKITELPKGLFDGLVSLQLLLLNANKINCLRVNTFQDLHNLNLLSLYDNKLQTISKGLF
TPLRSIKTLHLAQNPFMCDCHLKWLADFLFDNPIETSGARCSHPRRLANKRISQVKGKKF
RCTGQEDYRSRLSGECFQDLVCPEKCRCEGTVVDCSNLKLTRIPAHIPEHTTDLRLNDNE
IALLDGIGMFKKLPNLRKINLSNNKLRDIREGTFDGASGVLELLLTGNKLTGLQGRMFRG
LTGLKTLMLRSNQISCIDNTTFTGLSSVRLLSLYDNRISSIAPGAFATLHSLSTINLLSN
PYVCDCHLAWLGQWLKKTRVVSGNPRCQRPAFLKEIPIQDVANPDFTCDGGEDNGCLPTS
GCPDVCTCSDSVVRCSNRGLHSLPKGIPKDATELYLEGNMLTSVPKELAALKHLSLVDLS
NNSISTVAAYTFSNMTQLATLILSYNQIRCIPVHAFDGLKSLRLLTLHGNDLSTIPDGAF
NHLTALSHLALGANPLYCNCDLRWLSQWVKAGFKEPGIARCTGPPDMADRLLLTTPLNKF
QCKGPVDIGLVSKCAPCVADPCQNNGTCVSDASGSYHCTCPFGFKGQDCETAINACISFP
CMNGGTCHLQPGLEDHFSCVCPPGFEGQRCEANPDDCEDNDCENNATCVDGVNNYTCVCP
PNYAGDLCEEVLDPCLPGFDPCEHDSKCVHVGRSYRCECLPGYVGHFCEQDYDDCLENKC
QHGAECVDAVNGYTCVCKEGFSGLFCENPPPMILLQTSPCDQTDCQNGAQCLLVSGEPVC
RCMPGFYGNRCDKMATVHFLGREAYVELPGAKLRPNAHIVFQVATDKDNGILLYKEDHDP
LALELYQGHIRLIYDMASYPPTTVYSVESVNDGLFHTVELLIQNHSLSLVVDNGAPKSLG
KLARQPTVDHNTQLYIGGVPYQVMASGLRPGPERSPQAFNGCIHNVQINGEAQDLSYRAT
GGRPVEGKGDGVLVGCHSCSVCAQGTCREGGEMGVTCQCPHGRSGTLCERVTAPNPCQAS
RCVHGLCVPKGASYGCKCSEGYQGQFCERQQGPAACRGQRCGHGECRVSEAGEPVCSCLP
GYAGATCDTELTCEGELVREQLKRHQAMRTCTSTGKIPRVDCLRSCQAAAPAGVCCGVTK
TRRRKAVFRCTDGTSYSEEMETALECGCARCPL
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atggctccgggggcccaaccgagccggctttgggctctccgcttggccctggtcctggtt
ctgagcgccgtgtccggcgcgtacgcgtgcccgcacaagtgcagctgttccggatcccat
gtggactgtcagggtctcgggctcaagaccgtgccgaaggggatcccgcgcggggctgag
cgcctagacctgaacagaaacaacatcacgaggatcaccaaagtggacttctctggcatc
aagaacctccgaattcttcacctggaggacaaccaaatcagtgtcgtcgagagaggagcc
ttccaagaccttcgactgcttgagagactgcgcctaaacaggaacagactcatgctgctg
ccggaacttctcttccagtccaatcccaaactgggccgactggacctgagcgagaaccag
atccaggcggtgccgaggaaagccttcagaggaatcaccaacgtcaagaacctgcaactg
gacagcaaccacatcagctgcattgaagatggagctttccgagccctccgcgatctggag
attctcactctcaacaacaacaacatcaccctcatcccgctttccagcttcaaccacatg
cccaagttgcggacgcttcgcctgcactccaacaacctccactgcgactgccacctgtcc
tggctctccgattggctgcgggcgaggcgaggcctggcgcccttcacccaatgcatggcc
cccgcccacatgaggggcctgaatgtccccgacgtacagaagaaggattttctctgcggt
ggccccgcccacgccgagcccaggacgtgtacgcccctggtggccgtgtgcccgcccagc
tgcacctgcaacaacaacatcgtggactgtcgccgcaaaagcctgacggaaatccccgcc
aaccttccggacggcatcgtggagattcgtttggagcaaaacctgatcaaaagtgtcccg
ccaggagccttttcgtcctacaagaagctcaagaggatagacttgagtaagaaccagatt
ttcgacatcgccgccgacgccttcagtggcctccgctcgctcacctccctggtgctttat
ggcaacaagatcacggagctaccgaaaggactttttgacggcctggtgtctctgcagcta
ctcctcctgaatgccaacaagatcaattgtcttcgggtcaacaccttccaggacctgcac
aacctcaaccttctgtcgctgtacgacaacaagttacaaaccatcagcaagggacttttc
acaccactgcgctccatcaaaactcttcatctggcccagaatccctttatgtgcgactgt
cacctgaagtggctggccgacttcctgttcgacaaccccatcgagaccagcggggcgcgc
tgcagccaccccagaagactggctaacaagcgcatcagccaagtgaaaggcaagaagttc
cgctgcacaggtcaagaggactaccgcagccgtctgagcggcgaatgtttccaggacctg
gtttgtcccgagaaatgccgctgcgagggcaccgtagtcgactgcagcaacctgaaactc
acccgcattcccgcgcacatcccggaacacacgaccgacctgcggctgaacgacaacgag
atcgccttactggacggaatcgggatgttcaagaagctgccgaatttgaggaaaatcaac
ctgagcaacaacaagctccgggacatccgcgagggaactttcgacggggcgtccggggtt
ctggagcttctcctgaccggcaacaagctcacaggactgcagggacgaatgttccgaggc
ctcactggcttgaaaacgctaatgctgcggagcaaccagatcagctgcatcgacaacacg
acatttacgggcctgagctcggtgcgtctgctgtccctctacgacaaccggatctccagc
atcgctccgggagcctttgccaccctgcactccctctcgactattaacctcctgtcgaac
ccgtacgtgtgtgactgtcacctggcctggctcggtcagtggcttaagaagaccagggtc
gtgagtggaaaccctcgctgccagaggcccgccttcctcaaggagatcccgatccaagac
gtggccaaccccgacttcacgtgtgacggtggcgaggataacggctgtcttcctacatct
ggctgccctgacgtctgcacatgctcagacagcgtggtgcgatgcagcaaccgagggctg
cactcgctgcccaagggcattcccaaggacgccaccgaactttatctggagggtaatatg
ctgacttcggtgcccaaggagctggcggccctgaagcatctgtcgctggtcgacttgagc
aacaacagcatcagcacggtggcagcgtacactttcagcaacatgactcaactggccaca
ctcatcctgagttacaaccagattcgctgcatcccggtccacgccttcgacggtctcaag
tctctccgcctcctcactctccatggaaacgacctctcgacgatccccgatggagcgttc
aaccacctgaccgctttgtcccacctggctctgggtgccaaccccttgtactgcaactgc
gacctccgctggctctcccagtgggtgaaggctggcttcaaggagcccggcatcgctcgc
tgcaccggaccccctgacatggccgacaggctgctgctgaccacaccgctcaacaaattc
cagtgtaaaggtcccgtggatattgggctcgtgtcaaagtgcgccccctgcgtggcggat
ccctgccagaataacggcacgtgcgtgtccgacgcgtccgggtcctaccactgcacctgt
ccgtttggatttaagggtcaggactgtgagacggccattaacgcctgcattagctttccc
tgcatgaatggggggacgtgtcacctccagccgggcctcgaggaccacttcagctgcgtg
tgcccgccgggcttcgagggccaacgctgcgaggcgaacccggacgactgcgaggacaac
gactgcgagaacaacgccacctgcgtcgacggggtcaacaactacacttgcgtctgtccg
cccaactacgcaggtgacttgtgtgaggaagtcctggatccctgtctccccggttttgac
ccctgcgagcacgattccaagtgcgtccacgtcggtcgcagttataggtgcgagtgcttg
ccggggtacgtgggccatttctgcgagcaggactacgacgactgcctggagaacaagtgt
caacacggcgccgagtgcgtggacgcggtcaacggctacacgtgcgtctgcaaggagggc
ttcagcgggctgttctgcgagaatcccccgccgatgattttgctgcagaccagcccctgt
gaccagaccgactgccaaaacggcgcccagtgcctgctggtgtccggcgagcccgtctgc
cgctgcatgcccggtttctacggcaacagatgcgacaagatggccaccgtccatttcctg
ggacgcgaggcgtacgtggagctccccggcgcgaagctccgccccaacgctcacatcgtg
ttccaggtggccaccgacaaagacaatggtattttgttgtataaggaggatcacgacccg
ctggctctggaactgtaccaagggcacatccgactcatctacgacatggcgagctatcct
cccaccaccgtgtatagtgttgagtctgtcaacgacgggcttttccacaccgtcgagctt
ttgattcagaaccattcgctcagcctggtggtggacaacggcgcccccaagagcctgggg
aagctggcgcgccaacccaccgtagaccacaacacacagctttacataggaggcgtgccc
taccaggtgatggcctcggggttgcggccgggcccggaacgttcgcctcaggccttcaac
ggttgcatccacaatgttcagatcaacggggaggcgcaggacctgagttaccgagccaca
ggagggcgaccggtcgagggcaagggcgacggcgtcctggtgggctgtcactcgtgcagc
gtgtgcgctcagggaacgtgcagggagggcggcgagatgggcgtcacctgccagtgcccg
cacggacgcagcgggaccttgtgcgaacgggtcacggcgccgaacccctgccaggccagc
agatgtgtccacggcttatgcgttcccaagggggcgtcgtacggctgcaagtgcagcgag
ggttaccagggccagttctgcgagcgccagcaggggcccgcggcctgcagggggcagcgg
tgcgggcacggcgagtgcagagtgtccgaggccggggagcccgtctgcagctgtttgccc
ggctacgccggcgccacctgtgacaccgagttgacgtgcgaaggcgagctggtgcgggag
cagctgaagcgccaccaagccatgcgcacgtgcacgtccaccggcaagatcccgcgcgtg
gactgcctccgatcgtgccaggcggcggcgcccgccggcgtctgctgcggcgtcaccaag
acccgcaggaggaaggcggtgttccgctgcaccgacggcacgtcctactccgaagagatg
gagacggccctggagtgcggctgcgccaggtgcccgttgtaa
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