Syngnathoides biaculeatus (alligator pipefish): 133508499
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Entry
133508499 CDS
T09681
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133508499 (sh3tc2)
Membrane trafficking [BR:
sbia04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
133508499 (sh3tc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_1
TPR_2
SH3_9
CFAP70_TPR_C
SH3_2
SH3_1
TPR_MalT
TPR_7
TPR_10
ChAPs
Motif
Other DBs
NCBI-GeneID:
133508499
NCBI-ProteinID:
XP_061690630
LinkDB
All DBs
Position
11:21924185..21943290
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AA seq
1442 aa
AA seq
DB search
MTEGEDEDGPQVESFQGRQEPENYWKKKEPFLRGSWMTQGEKCSSEIMLFFTGRRRSSED
PDRVLQEALRTRLRVVESNSKDVTQLFKDLSARLVSVHAEKDSFVLTFKTVEEIWKFSTY
LALGYVARCLENFLCDQTFWLEPKLLIDLEINVTVNEDHLATLYLELLLQEGSFFAKALY
TRSDEDDEDQLSFQKNDLLMVKDTGQEEMWEGTLLSTGRHGLVPVNATQPLPYPFYQWFL
RNYPGYAGCSPTEKEPFDHPLVTGSCVSVVDYSPNFHDELQLSQGDVVEIQGLLIQGLRV
FIGKHSSTGCTGFVNKAHVKPLDTISLDRHLVFLTEEERATLAQTGLFSSEPCDSNLLER
LFSSDISSVYRLDRLDESDFMYIRNRPKRDHKVPASTRQSVMSEKSGGTPPYHSSPRPSL
SHSSPRVSVYQSHNPLAQEGERLSFTLDDTFRDLSEFQEELPLFLEETSWEGDESEVSDP
TLALLNHDHFQEDFLPLYDLQYSFLWVTFNGKDEGELSGQLESVRECAKRMGMHWAHRRA
CFLLGRLCARKLKLSQARVYYEEALSVAVDNFSDTPLLIALLTNLTAVYLKQRMTDKLPL
TLEKASAMLLCLPNHTYTSSDEIELLKLLLRRSMVMGDKYLEARVCYLIASLFLLLRKPD
DALPFVERLQFLSSTLSGNNGLPVAPLDLNWLLSLLYHRKYMPHLVLASLSLDSRQDHTL
HDALQRIERFIRNSARLNPFWKEGTSLLPAQIVVYLLQTLAIAEKVSDLKMQRDLCLGLA
SVYQQYGALDKAVQCAQRAVETGGFINEEEGFEASVLLGWLLVLTGQAEKAQGVLQPLLI
SLEGTDSATQRGVIHNLLALCLRQQGCIPEAGWHLYSALMIGRESGNQRNQALALANLGC
LALDTGASTLAEHFLVRSLHLFLNIWESPTDEEPVQIFLWLGRSYKNRGKSHHIRSCFEM
GLLIALHARNLPSQLVVAKVLSRLYSEMLLYGQSIVYYEHCVSVARELKDKRLEGEYLEI
LSSLYLSLNTERSSRKSLDYTKQSLRISIDLGKREEESETWLQVGRIYYLIKEDELADMY
LQAAVKTALRMNDPRFSMSIYEEAGDVYFKGHRNRMASIPFYRDGGLPFSRSIKDVHSEF
RLLSKLTELLMDQGEQEEALQYASLAVEMANKTGMCMNERTAYHRLATVYYSLQDYELAE
NYYLKSLSLCPPVMQHQMEARYYTQVYCRLGNLTLHKLKDSLDALGYFHLALAAALEDRA
NPQALYVVYMKLAEIHSNHVPDVQLCQLYSDRAHSLKRVLSGAGDSAVNNNIGKDTSADC
DGDSFQKTCRMQIDTNSDNEIINEVDDGREDDCIPPPDISAFITSQSYCESILTDSFDTA
REHMSDSCSSTDTVQTSPKQINGNDWTSSNISFHSEKETVMDPHLEEKDATQIDSSADNF
PS
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaggagaggatgaggatggcccacaggtggagtcatttcaaggacgtcaggag
ccagaaaactactggaagaagaaagagccctttcttagaggaagttggatgacacagggt
gaaaaatgctcctcagaaataatgctctttttcactggacgccgacgctccagtgaggac
cctgaccgggttctccaggaggccttgcgcacccggctccgagtagtggagagcaacagc
aaagatgtcacccagttgtttaaggacctgtctgcacgtctggtgtctgtccatgcagag
aaggacagctttgtcctcacgtttaaaactgtcgaagaaatctggaagttttccacttat
ctagcattaggttatgtggcacgctgcttggaaaacttcctttgtgatcaaaccttctgg
ctggagccaaaactgctcattgacttggagattaatgtaacagtaaatgaggatcacctg
gccaccctctacctggagcttttactccaggaaggatctttctttgctaaggcgctgtac
acaagaagtgacgaggatgacgaagatcagctgtccttccaaaagaatgatcttctcatg
gtgaaggacacaggacaggaggaaatgtgggagggtacgctgctctccactggacgccat
ggcctcgttcctgtcaacgccactcagccgcttccctaccctttttaccagtggttcctg
aggaattacccgggttatgcaggatgctcgccaacagagaaggaaccatttgatcatcca
cttgtgacaggttcatgtgtgtcggtggtcgactacagtccaaacttccatgatgaactc
cagctcagtcaaggggatgttgtggagattcagggtctactaattcaaggcctccgggtc
ttcataggaaaacactcctccactggttgtaccggcttcgtcaacaaggcccacgtcaag
cctctggacaccatttccttagatagacatttggtctttctgaccgaggaggagcgagcc
acgctggctcagacgggcctgttcagctccgagccctgtgatagcaacctactggaaagg
ctcttctcatcagatatcagttctgtgtacaggctagacaggctggatgagtctgacttc
atgtacatcagaaatcggcccaaacgtgatcacaaggtccctgcaagcacacgtcagagt
gtcatgtcagaaaaaagcggtggaacgcccccataccactcctccccccgcccatcgcta
tcacactcgtccccccgcgtgtctgtttatcagtcccacaatcctctggcacaggaggga
gagcgcctgtccttcactctcgatgacacattcagggacctcagtgaattccaggaggag
ctccctctcttcttggaggaaaccagttgggagggggacgagtcagaagttagtgaccca
acgctggctctgctaaaccatgaccacttccaggaagatttcctgcccctgtatgacctt
caatattccttcctgtgggtgaccttcaatgggaaggatgagggtgagctctcagggcag
cttgagagcgtgagggagtgtgcaaagaggatgggcatgcactgggcacataggcgagca
tgctttcttctgggaagactctgtgccaggaagctgaagctatctcaggctcgcgtatat
tatgaagaagcgctgagtgttgctgtggacaatttcagtgacacgccactgttgatcgcg
ctcctaaccaacctcacagcagtttacctgaagcagcgtatgacagacaagctgcccctc
accctggaaaaagccagcgccatgctgctctgtcttcctaaccatacctacacatcatca
gatgaaattgagctgctgaagctgcttctgaggagatccatggtaatgggcgataagtat
ctggaagcccgagtgtgctaccttatcgccagcctcttcctgcttctaaggaaacccgat
gatgcgcttccctttgttgagcgcctccagttcctctcctcaaccctctcgggaaacaat
ggacttcctgtagcacctctggacctcaactggctcttgagcttgctctatcatcgtaaa
tacatgcctcacctggttctggcttctctaagcctcgattcaagacaagaccacacactc
catgacgctttgcagaggattgagagatttattaggaactcagctcgcctgaacccattc
tggaaggaaggaacctccctgctccccgcccagattgtggtttatctcctgcagacactg
gctatagctgagaaagtgagtgacttaaagatgcagagggacctttgtctcggcttggcc
tcagtttaccagcagtatggtgccctagataaggctgtacaatgtgctcaacgagcagtg
gagacaggaggttttatcaatgaggaagaaggctttgaggcctctgtgctgcttggctgg
ctgctggttttaacagggcaagctgagaaggcccagggtgtcctacagccacttcttata
tcgcttgagggaacagatagcgccactcaaagaggcgtcatccacaatcttttggcttta
tgtctaaggcagcagggctgcataccagaagcgggctggcatctttactcagctttgatg
ataggccgcgaaagtggaaaccagaggaaccaagccctggcactggccaacctaggctgc
ctggcactggatacaggggcgtcgacattggcagaacacttcttggtcagatccttgcac
ctttttcttaacatctgggagagccccacagatgaggagcctgtgcagatcttcctttgg
ttggggaggagctacaagaatagggggaagagtcaccacatcaggtcctgttttgaaatg
ggacttctgattgcactgcatgctagaaacctgcccagtcagttagtggtggccaaagtc
ctgagtcgactgtattccgagatgctgctctacggccaaagcattgtctattatgaacac
tgtgtgtcagtagccagagaactgaaggacaaaagacttgaaggggaataccttgaaatc
ctaagcagtctttacctttcactaaatactgaaagatcatctcgtaaatctctggattac
accaagcaaagtctgaggatttccattgatttgggcaagagagaagaagagtctgagacc
tggttgcaggtgggaaggatctattacctcatcaaggaggatgagttggctgacatgtac
ctgcaggcagctgtgaagacagcacttagaatgaacgacccccgtttttcgatgagcatc
tatgaagaagcgggggatgtctactttaaagggcaccggaacagaatggcatcaatacct
ttttacagggatggcggtttaccattttcccgaagtatcaaagatgtccattcagagttc
cgcttgttgagtaaactaacagagttgttgatggaccagggggagcaggaagaggctctg
caatatgcttcactcgcggtggaaatggcaaacaaaaccggtatgtgtatgaacgagagg
acagcgtaccatcgactggcgacagtttactacagccttcaggactacgagctggctgaa
aactactatctcaagtccctgtctctctgtccgcctgtcatgcaacaccaaatggaggct
cgctactacactcaggtctactgcaggctgggaaacctcactctgcacaaactcaaggat
tctttagacgcgttgggttatttccaccttgctctggcagctgccctggaggatcgagcg
aacccccaggctctgtacgtcgtgtatatgaaactggcggagatccacagcaaccacgtg
cctgacgtccagctatgccagttgtacagcgacagagcccatagcctgaagagagtacta
tcaggagcaggggactctgctgtgaacaacaatattggaaaagatactagtgcagactgt
gacggtgactcattccaaaaaacttgcaggatgcaaatagataccaacagcgacaatgaa
attattaatgaagttgatgacgggagagaggatgactgcattccacctccggacatctcg
gcatttatcaccagtcagtcttactgcgagagtattttgactgactcctttgacacagcc
agggagcacatgtcggactcttgcagctccacggacactgtgcaaacttccccgaaacag
ataaatgggaacgactggacctcaagtaatatcagtttccattctgagaaggaaacggtc
atggatcctcatcttgaggagaaagatgccactcagatagacagcagtgcagataacttt
ccatcctga
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