Syngnathoides biaculeatus (alligator pipefish): 133508505
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Entry
133508505 CDS
T09681
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133508505 (rnf20)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133508505 (rnf20)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
133508505 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
BRE1
zf-RING_2
zf-rbx1
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
133508505
NCBI-ProteinID:
XP_061690638
LinkDB
All DBs
Position
11:27176422..27188651
Genome browser
AA seq
1025 aa
AA seq
DB search
MSGQKRPADSSGPSSSSGVHPEKRRERDGEDAGPGVSAAAAGGSTAVETVIKLGGVSNSE
EQDIKALQAKNRKLGESLDQRQGIEDELRERIERLETRQATDDASLLILNRYWNQLDENI
KLFIRLYDQSPNGPEKSPTGEGRNLKPETPEPDGDSNQERAKDRGHQGETSSSFLATLAS
STSEEMEAELQERVQSSQMQATRVVEIYKCLKSTVDQLKADMDSRLAGSLCHVASKLNTL
LSSENERLQQLSEDLKQKHSHMTSESRSLGRAANKADQRVSELQVLSEELQWDMEKIRRR
ENRLNAHMSEILERVNSKGYKVCGEASSVCGTITINKRKFEEMNSELEENQELADNRLIE
LQKLQQDLQNVLQENNNMKTELLSRAEGMVKDTSEYRCLQSQFSVLYNESLILKAQLDET
RARLNTTRTARLRQLEHMENDEVTLQRKVRTEVFQLEDTLAQVRKEYEMLRIEFEQTLAA
NEQAGPINREMRHLISTLQTHNQQMKGEVVKYKLRLRETQAELNQVRCEKIRISKGSAVL
QSTEIDVKEELTSPTTAAVSGELAVKSETPDNDYSMPNSTGLSVKTEPGVETEVTVKEEE
KEEKKEKEEKKDIVKKEEKDRERERERERPTRSGTASSGMKEEREKLGSGNLTEESSGER
LSSAGGPKRKEMEQLKIVRVELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKAK
SESEELRQRLRELEERERREGKKMADEEALRKIRSVEEQIDILNKKLSIAKQEEDALLSE
MDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELSDQLLTL
KTQVDAQLQVVRKLEEKERLLQGTISTAERELTLRTQALDMNKRKAQESTLLSEEVRTQL
EQVQQRLVVVREEVVENSISREKESFNSRRAQEDISKLRRKIEKAKKPAEKISNGDEILN
EEISEYKARLTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFH
RIYIG
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcagaagcgtcctgcagactccagcggcccttcctcatcctctggtgtgcac
ccagagaagcggagggagcgagatggagaggacgcaggtcccggtgtcagtgctgcagct
gcgggtggcagcacagcggtggagactgtcatcaaactaggaggggtttctaactcggaa
gaacaagatatcaaagctcttcaggctaagaaccgtaaactgggagaatctttggaccaa
agacaggggattgaagatgaattgcgagagcggatcgagagacttgagacccgccaggcc
acggatgacgcaagtctgcttattctcaatagatactggaatcagcttgatgaaaatatt
aagctgttcattagactatatgaccagtcgccaaatggaccagaaaagtctccaacagga
gagggaaggaacctgaagccagaaacacctgaaccagatggggactcaaatcaggagagg
gccaaggacagaggccaccagggcgagacatccagctctttcctggccaccttggcaagc
agcacaagtgaggagatggaagccgagctccaggaaagggtccagtccagccaaatgcag
gccactcgtgttgtggagatctacaagtgtctaaagagcacagtggaccaactgaaggca
gacatggactctagacttgctgggagtttgtgtcacgtagcttccaagttaaacactttg
ctgagcagtgaaaatgagcgtcttcaacagctgtctgaggacctcaagcagaaacacagt
catatgaccagtgagtctcgatctctcggtcgtgcagcaaacaaggcagaccagcgtgtc
agcgagttgcaggttctaagtgaagaacttcagtgggatatggagaagatacggcgaaga
gaaaatcgcctcaatgcacacatgagtgagatactagagagggtgaacagcaaaggctat
aaagtgtgcggggaggccagtagtgtatgtggaactatcacaatcaacaagagaaagttt
gaggaaatgaacagtgaactggaagagaaccaagagcttgcagataatcgtctcattgag
ctccagaagctccagcaggacctgcagaatgtgctgcaggagaacaacaacatgaagact
gagctgcttagtcgagcagagggcatggtgaaggatacctctgagtatcgctgcctgcaa
tcgcagttttctgtgctctacaatgagtctttgatcctcaaggctcagttagacgagacg
cgtgcccgtctcaacacaaccaggacggcacgcctacgacagctggagcacatggagaac
gacgaggtgacactgcagaggaaggttcgcactgaagtatttcagttggaagataccctt
gctcaagtcaggaaggagtacgagatgttgcgcattgaatttgaacaaactcttgcagcc
aacgagcaggcaggtcctataaacagagagatgcgccatctgatcagcaccctacaaacc
cataaccagcagatgaaaggagaggttgtgaaatacaaactgagactgagagagacacaa
gctgagctcaaccaggttcgatgtgaaaagattcgcatttcaaaagggagcgccgtcttg
caaagcacagagatagacgtgaaggaggagctgacgtctcctacaacagcagctgtctca
ggggagttagcggtcaagtcagaaactccagacaatgactattctatgccgaacagcaca
ggcctttctgtgaaaaccgagccaggagtcgaaactgaggtaacagttaaggaggaggaa
aaagaggagaagaaagaaaaagaagaaaagaaagacattgttaagaaagaggagaaagac
cgggagagggaaagagagagagagaggccaactcgcagtggtactgccagcagcgggatg
aaggaagagagggagaaactgggaagtggcaacctaactgaggagtcatccggggagcgt
ctttcttcagctggcgggccaaagaggaaagagatggagcagctcaagattgtcagagtg
gaactcaagaaagctcaggagtcccagcgagagatgaagcttctcttagacatgtatcgc
tcagcgccaaaagagcagagggacaaagttcagctcatggcagcagagaagaaggccaag
tcagagtcggaagagctacggcagaggctgagggagctcgaggagcgagagagaagggag
ggcaaaaaaatggccgatgaggaggcccttcgaaagattcgatctgtggaagagcagatc
gacatcctcaacaaaaagttatctatagcaaaacaggaggaggacgcattgctgagcgag
atggacgtgacaggtcaggccttcgaggacatgcaggaacagaacattcgcctgatgcag
cagctgcgggaaaaggacgacgcgaactttaagctgatgagcgagcgcatcaagtccaac
cagatccacaagttattgaaagaggagaaggaagagctctcggatcaactcctcacttta
aaaacacaggtggatgcccagctgcaggtagtgaggaagcttgaggagaaggaacgcctc
cttcagggcaccatcagtactgctgaaagagagttgacactgaggacacaagcgctggac
atgaacaaacgcaaggctcaagagtcaacattgttgtcagaggaggtgcgaactcagctg
gagcaggttcagcagaggcttgtcgtggtccgagaggaggttgtcgaaaatagcatctcc
agagagaaggagtcgtttaattcccgacgagcacaggaggacatctctaaactgaggaga
aaaattgagaaagccaagaaaccagctgagaaaataagcaatggagacgaaatactaaat
gaagaaattagtgagtataaggctcggctaacgtgtccctgttgcaactcgcgagtgaag
gacgccgtcctgacaaagtgcttccacgtcttctgcttcgagtgcgtcaagacacgctac
gacacacgccagaggaaatgccccaagtgcaatgccgcgtttggagccaacgacttccat
cgcatttacatcggctaa
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integrated database retrieval system
