Syngnathoides biaculeatus (alligator pipefish): 133508632
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Entry
133508632 CDS
T09681
Symbol
prom1a
Name
(RefSeq) prominin-1-A isoform X1
KO
K06532
prominin 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbia04147
]
133508632 (prom1a)
04090 CD molecules [BR:
sbia04090
]
133508632 (prom1a)
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
133508632 (prom1a)
CD molecules [BR:
sbia04090
]
Proteins
133508632 (prom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
DUF3587
Tweety
Motif
Other DBs
NCBI-GeneID:
133508632
NCBI-ProteinID:
XP_061690853
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All DBs
Position
11:complement(14596871..14657807)
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AA seq
890 aa
AA seq
DB search
MPSSGLTVGKSGTLVLLCMLLGCGELQEPEPRRLPPPPAKLDFGYVPAGVYETVAHYEPG
PIGILFHMVHTFLSLVQPNDFPQDLLIRLAKDKFGALQTEYQKPENVVLSLQAIYYEVGF
LVCAALGVLFAVLVPVVGLFFCLCRCCDNCGGEMHQRQRKNADCRRGLLGTLLFSASLVV
TIGVLCAYAANQNLSAQVKNIRRLVNSNMRDLHAFANDTPMQIDYLTSQYATAKNQVLYD
LENIGPLLGGRIRDVLDKEVHPALDGVLTTTRAMRETKEALENVSVSLQVLQDATGKLDL
NLSLVRASIRRSLDDPGCHDEESDATSAQLCRGIRRSLQQLHVSANFTRLPNVNAQLEKM
DDVMKTDLSAVVNKGYASLNDTPYLVMVQTRGVVDRVQNLVGDIGENVANLSKAFPLHTS
LSNFTIFISHVHAKIEDQYPEIDKVDFYRWTGCVALCCMLVLVLAFNYLGLLCGTLGYDK
HASPTTRGCISNTGGTMLMAGVGFSFLFSWVLMGLLTAIFLAGGNAEKLLCEPFHTKELF
KVVDAPYLVNSEWRNFIPGYLYNDSELELTAESFYSTCKQNKGIYSALRLDKVFNVSSFL
NATMFTKDLVALLSSVKIDLRGVILLEADGKQNLLDFAEAGLSETNYADYLEEVNKGVTV
VDLLSFANELEAQTDLMPRGPLQASLKGHVGTVRQIHSQQVVPMQQATSALNQSMRFLER
TASDLPNKVLAVLDAIKAAQYLISHNATQLINRESAKYTSNIVSYFLQYIEWVKASLALE
VAPCKPFSNVLDTVEIITCSFLVDSMNVFWMGLGCSTLFLIASIVLAVRLAKFYRRMDTE
DVYDDMESGNNGYHSEHPQGILNPPVTSIPTYDTVNRFPRASAPPRHIDW
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgagcggactcacggtgggcaagagcgggaccctcgttctgctctgcatgctg
ctgggctgcggggaactccaggagccggagccgcggaggctgccacccccgccggccaag
ttggacttcggctacgtgcccgccggagtctacgagaccgtggcccactacgaaccggga
cccatcggcattctgttccacatggtgcacactttcctgagcctggtgcagcccaacgac
ttcccacaagatcttctcatcaggctggccaaggacaagtttggagcccttcagactgaa
tatcagaagccggagaacgtagtgctgagcctgcaggcgatctactacgaggtgggcttc
ctggtgtgcgcggcgctgggcgtcctgttcgccgtcctggtgcccgtggtgggcctcttc
ttctgcctgtgccgctgctgcgacaactgcggcggcgagatgcaccagcgccagaggaag
aacgccgactgcagacgaggcctgctgggaacgctgctcttctccgcctcgctggtcgtc
acgatcggcgtgttgtgcgcgtacgccgccaatcagaacctgagcgcccaggtgaagaat
atccgacgcctggtcaacagcaacatgcgggacctgcacgcctttgccaacgacacgccc
atgcaaatcgattacctcacgtcccagtacgccaccgccaagaaccaagtcctctacgac
ctggaaaacatcgggccgctcttgggcggaaggatacgcgacgtgttggataaggaggtg
cacccggccttggatggcgtgctgacaacaacacgagccatgcgggaaaccaaagaggcc
ctggagaacgtgagcgtgtctctgcaagtgctgcaggacgccacgggcaagctggacctg
aacctgagcctggtcagggccagcatccggcgctccctcgacgacccgggctgccacgac
gaggagtcggacgccacctcggcccaactgtgccggggaatccgccggtcactgcagcag
ctgcacgtcagcgccaacttcacgcggcttcccaacgtgaacgctcagctggagaagatg
gacgacgtgatgaaaacggacctcagcgccgtcgtcaacaagggttacgcctccttgaac
gacactccttatttggtcatggttcagacccggggggttgttgacagggtgcagaatttg
gtgggcgacatcggcgagaacgtggccaacctgtccaaagcgttccccctgcacacgtcc
ctgtccaacttcaccatcttcatcagccacgttcacgccaagatcgaggaccagtacccc
gaaattgacaaggtggacttctacaggtggacgggctgcgtggctttgtgctgcatgctg
gttctggtgctggccttcaactacctgggcctgctgtgcggcacgctgggctacgacaag
cacgcctcgccaaccacgcgggggtgcatctccaacacggggggcaccatgctcatggcc
ggcgtgggcttcagcttcctcttctcctgggttctcatgggcctgctgaccgccatcttc
ctggcggggggcaacgcggagaagctgctctgcgagcccttccacaccaaagaactcttc
aaggtggtggacgcgccgtacctggtgaactccgagtggaggaacttcatccccgggtac
ttgtacaacgactcggagctggagctcacggcggagagcttctatagcacttgcaaacaa
aacaaaggcatctactcggcccttcgcctggataaagtcttcaacgtctcgtctttcctc
aatgccacaatgttcaccaaggacttggttgccctgctgagcagcgtgaaaatcgacctg
agaggggtcatcttgctggaagcggacggcaagcagaacctactggatttcgccgaggcg
ggactgtcggaaacgaactacgcggactacctggaagaggtcaacaaaggcgtcaccgtg
gtggacttgctttccttcgccaacgagctggaagcccagacggacctgatgcctcgcggc
cctttgcaagcatctctgaaaggacacgtgggcaccgtgcgacagatccacagccagcag
gtggtccccatgcagcaggccacgagcgccctgaaccagagtatgagattcctggaaaga
actgcttcagacctcccaaacaaagtcttagccgtgctggacgcaatcaaggcagcccag
tacctcatttcccataatgcaacgcaacttatcaaccgggaaagtgcaaaatacacatca
aatattgtgagctacttccttcaatacatagagtgggtcaaggcatccctggccttggag
gtggcgccgtgcaaacctttcagtaatgtgctggacactgtggaaatcatcacctgcagt
ttcctggtggactccatgaacgtgttctggatgggcctgggctgcagcacgctcttcctc
atcgcgagcatcgtgctcgccgtccggctggccaagttctaccgcaggatggacacggag
gacgtttacgacgatatggaaagtggtaataatggttatcatagcgagcacccgcaaggc
atcctaaaccctcccgtgaccagcatcccgacatacgataccgtgaaccgattcccgcgg
gcctctgctcctccgaggcacatcgactggtga
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