KEGG   Syngnathoides biaculeatus (alligator pipefish): 133508757
Entry
133508757         CDS       T09681                                 
Symbol
cul4b
Name
(RefSeq) cullin-4B isoform X1
  KO
K10609  cullin 4
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03420  Nucleotide excision repair
sbia04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    133508757 (cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    133508757 (cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sbia04121]
    133508757 (cul4b)
   03400 DNA repair and recombination proteins [BR:sbia03400]
    133508757 (cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sbia04147]
    133508757 (cul4b)
Ubiquitin system [BR:sbia04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     133508757 (cul4b)
DNA repair and recombination proteins [BR:sbia03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      133508757 (cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      133508757 (cul4b)
Exosome [BR:sbia04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   133508757 (cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 133508757
NCBI-ProteinID: XP_061691117
LinkDB
Position
11:complement(10574985..10586826)
AA seq 859 aa
MFPTGLSSPNPPPTQEARATATDVKNDSGNIISSKKRKINGSEREESSDTISPSPPKTLT
SSSSASSSPVHIQKKLRFEDSVDFIGLDAKMAEEAAAASCSNSKSKAVLLAAGVGGHHAN
GLSKSAAGSGTFSNSKPGAAKKLIIKNFKEKPKLPENYTQETWQKLKEAVEAIQNSTSIK
YNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKAQINQFREGVLDSVLFLKKIDKCWQ
DHCRQMIMIRGIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGILLLI
EMERSGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYL
HHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTSTLQKGLTHLLDENRIQDLS
LLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDVCF
MKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKMLDKIMIIF
RFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMEL
SKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYIPMEVHLPPEMVRLQEIFKTFYLG
KHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFTLEEIKLASGIE
DSELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHRLFRIKINQIQMKETVEE
QASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKFPVKPADLKKRIESLI
DRDYMERDKENPNQYNYVA
NT seq 2580 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttatcttcccctaaccccccgccaacccaggaggcaagagcaacg
gctactgatgtcaaaaacgacagcggcaacattatatcttcgaagaagaggaaaataaac
ggctccgagagggaagagagcagcgacaccatctccccttcgcctcccaagaccctcact
tcctcgtcgtccgcctcctcgtcgccggtgcacatccagaagaagttgcgcttcgaggac
tccgtggacttcatcgggctggatgccaaaatggccgaggaggctgccgccgcttcctgc
tccaacagcaaaagcaaagccgtgctcctggccgccggcgtcgggggccaccatgccaac
ggactcagcaagagcgcggcgggctccgggaccttcagcaacagcaagcccggcgccgcc
aagaagctcatcatcaagaatttcaaagaaaagcccaagttgccggagaattacacacag
gaaacgtggcagaagctgaaggaggcggtggaggccatccagaacagcacttccatcaaa
tacaacctggaggagctgtaccaggctgtcgagaacctgtgctcccacaaaatctctgcc
aagctgtacaaacagctgagggctgtgtgtgaagaccacatcaaggcccaaatcaatcag
ttcagagagggtgtcctggacagcgttcttttcctgaagaaaatagacaagtgctggcag
gatcactgcagacaaatgatcatgatcaggggtatatttttatttttggaccgcacctat
gttttacaaaactctatgctgccgtccatctgggacatgggcctggagctcttcaggttc
tacatcatcagcgacctgaaggtccagagcaaaaccatcgacggcattctgcttctcatc
gagatggagcgcagcggcgaggcgatcgaccgcagtctgctgaggagcctgctgagcatg
ctctcggacctgcagatttatcaagactccttcgagcagcgctttttggaggagacaaat
cgtctgtacgccgcagagggccaaaggctgatgcaggagcgagaggttcccgagtatttg
catcacgtcaacaaacgcttggaggaggaggcggaccgagtcattacatatctagaccag
agcacacaaaaacctcttattgccacagtggagaagcagctgctaggtgaacatctcacg
tccactctgcaaaaagggctgacgcacctgctggatgaaaacaggattcaagatctgtcc
ctcctctatcagctttttagtcgcgtgcgaggtggcgttcaggtcctcctgcaacactgg
atcgagtacatcaaggctttcggaagcacaatcgtgatcaacccggaaaaagacaaaacg
atggtgcaagagttgctggacttcaaagacaaggtggaccacatcatcgacgtgtgcttc
atgaaaaatgagaagtttgtgaacgccatgaaggaagcgtttgaaacattcatcaacaag
cggccaaataagcccgccgagctcatagccaaacacgtggattctaaactgcgagctgga
aacaaagaggctacagatgaggaattggaaaagatgctggacaaaatcatgattatattt
agattcatctatggaaaagatgtctttgaggctttttacaagaaggacctggccaaaagg
ttactggtgggaaaaagtgcttctgtggatgctgagaagtcaatgttgtccaaattaaaa
catgaatgtggagcggcgttcaccagcaaactggaggggatgttcaaagatatggagctt
tctaaagatatcatggtgcaattcaaacagtatatgcagtgccaaaacattcccggtaac
atcgaactgactgtgaacatcctcaccatgggctactggcccacctacatccccatggaa
gtgcacctgcctcccgagatggtgcggctgcaagagatcttcaagaccttctacctgggc
aagcacagcggcaggaagctgcagtggcagtccacgctcggccactgcgttttgaaagca
gaatttaaagagggaaagaaggagctgcaggtatcacttttccaaacactcgtgctgctg
atgttcaacgaaggggaggagttcaccctggaggagatcaaactggcctcaggaatagag
gatagcgagctgcgtcgcaccctgcagtcgctggcgtgcggcaaagcgcgagtcctcacc
aaaatcccgaaaagcaaagacgtggaggacggcgacaagttttcctgcaacgacgacttc
aaacacaggcttttccgcattaaaatcaaccagatccagatgaaagaaacggtggaggag
caggccagcaccacggagagggtcttccaggatcggcagtaccagatcgacgccgccatc
gtccgcatcatgaagatgaggaagacgctgagtcataaccttctcatgtccgaagtgtac
aaccagctcaagtttcccgtcaagcctgctgacctgaagaagaggatagagtctctcatt
gacagggactatatggagcgtgacaaggagaaccccaaccaatacaactatgtggcttag

DBGET integrated database retrieval system