Syngnathoides biaculeatus (alligator pipefish): 133508794
Help
Entry
133508794 CDS
T09681
Symbol
si:ch73-233f7.1
Name
(RefSeq) protocadherin-10
KO
K16499
protocadherin delta 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbia04515
]
133508794 (si:ch73-233f7.1)
Cell adhesion molecules [BR:
sbia04515
]
Cadherins
Protocadherins
133508794 (si:ch73-233f7.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
133508794
NCBI-ProteinID:
XP_061691202
LinkDB
All DBs
Position
11:complement(10221810..10253027)
Genome browser
AA seq
1001 aa
AA seq
DB search
MDARRLPRCRWVPVTGLAICLLLCACGVDLVLAQIRYSIPEELEHGAFVGNIAEDLGLDV
AKLSARRFRIVSGAKKQYLEVNLENGILFVNEKIDREELCERSPSCFLHLQVVIENPLEL
YRVEVEILDVNDNSPSFPWSEFNVDITESAAPGSCFPLESAQDLDVGSNSLRSYQLGANE
HFLLNVQTRNDGSKFAELVLDNPLDRERQSKHEMVLSAFDGGSPERSGTAVITVTVLDAN
DNVPVFDRSVYRARLVENAPRGTPVLKLNATDEDEGSNGEVTYAFSGHAPLKVRELFTVD
PYTGEIRVKGVVDYEKANVYELYVQARDRGPSAVAVHSKVLVDIVDVNDNSPEVILTSVS
TPVQEDAPPGTVIAVISVMDRDSAENGNVDCQIPGNVPFQLHTSFKNYYTLVTSELLDRE
ALAEYNITLTARDLGSPSLSTRKTILVQVSDVNDNPPRFSQPSYSVYVTENNAPGASICT
VTAFDPDSNQNAYLSYSIVEGLIQGMPVSTYVSVNSDNGNIYALRSFDYEQLRNFQIVVR
AQDAGFPPLASNVTVNVFVLDQNDNAPIIVSPLPRNGSVATEVVPRSVDAGYLVGKVTAL
DADAGQNSRLSYQVTQATDPGLFSVALYTGEIRSLRRLVDKDASRHRLVILVKDNGQPPL
SATVSVVLTVVDGVPESLSDYGDLTLSPQPPSNLALYLIVSLSTVSLIFLVAIIVLAAVK
CYKDRETPSGYNLPPLARCCCGGFQPEPPPDVFKKSNLNLQISSTANKVPTNCVEVSGSG
GLTQPYCYKVCLSPESSKSDFMFLKPCSPGSAPRNNEAKGAEHPWSASVNNGANTPNELK
QPNTDWTLTKNQNSSIKSYNSINMDGTLMRKAMHADPENYVTSMAPGQYWTWGTRVRAAK
DYKMSPSPGGGVVPSRPWTPRCTPPPLRQPTNPPPPPPPPDYHHNVYIPGTPSGFCTLRP
AAQQRSDLDVRNSFSTFGKKRRLQMSPQGEAAVINNDLYND
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcgcaggctgcccagatgccgctgggtgccggtgaccgggctcgcgatctgt
ctgctcctgtgcgcctgcggagtggacctggtgctggcgcagatccgctactccatcccg
gaggagctggagcacggagctttcgtgggcaacatcgccgaggatctgggcttggatgtg
gccaaattgtccgcgcgtcgcttccgaatcgtgtccggagccaagaagcaatatctggaa
gtcaacttggagaacggcattttgttcgtgaacgaaaagatcgacagagaggagctctgt
gagcgcagcccgagctgttttttgcacctccaagttgtcatcgaaaaccctttagagctg
tacagagttgaggtggagattttagacgtcaacgacaactcgcccagcttcccgtggagc
gaattcaacgtcgacatcacggagtcggctgcgcccggctcctgctttccgctggagagc
gcgcaagacctggacgtgggcagcaattctctgcgctcttaccagctgggcgcaaacgag
cacttccttctcaacgttcagacgcgcaacgacgggagcaagttcgccgagctggtgctc
gacaacccactggaccgggagcggcagagtaagcacgagatggttctgagcgcatttgac
ggggggtcaccggaacgctccggaaccgccgtgatcaccgtcacggtgctggacgccaac
gacaacgtccccgtcttcgatcgctccgtgtaccgggccagactggtggagaacgcgccc
agggggacgccggtgctcaaactgaacgccaccgacgaagacgagggctccaacggggag
gtgacctacgccttcagcggacacgcgcctctgaaagtgcgcgagctgttcaccgtggac
ccgtacacgggggagatccgcgtcaagggcgtcgtggactacgagaaagcgaacgtgtac
gagctttacgtgcaggcgagggacaggggcccctcggccgtggccgtgcacagcaaagtg
ctggtggacatcgtggacgtgaacgacaacagccccgaagtcatcctcacgtccgtgtcc
acgccggtgcaggaggacgcgccgccgggcaccgtcatagccgttatcagtgtcatggac
cgggattcggcagagaacggcaacgtggactgccaaatccccggcaacgtccccttccag
ctgcacacctccttcaagaactactacacgctggtgacgagcgagctgctggaccgggaa
gcgctggccgagtacaacatcacgctgacggcgcgcgacttgggctcgccgtcgctgtcc
acgaggaaaaccatcctggtgcaagtgtctgacgtgaatgacaacccgccgcggttttcg
cagccgtcctacagcgtctacgtgaccgagaataacgccccgggcgcttccatttgcacc
gtgactgccttcgaccccgactccaaccagaacgcttatctgtcttattcgatcgtcgag
ggtctaatccagggcatgcccgtgtccacgtacgtgtccgtcaactcggacaacggcaac
atttacgccctgcgatccttcgattacgagcaacttcgcaactttcaaattgtggtgcga
gctcaggacgcgggtttccccccgctggccagcaacgtgaccgtcaacgtttttgttttg
gatcagaacgacaacgcgccgatcatcgtgtccccgctgcctagaaacggcagcgtggcc
acggaggtggtgccgcgctccgtggatgccggttacctagtcggcaaagtcacggcgctg
gacgccgacgcggggcagaactcgcggctgtcctaccaggtgacgcaggccactgatccc
gggctgttcagcgtggcgctctacacgggggaaatcaggagtttacgccgactcgtggac
aaagacgcgtccagacatagactggtgattctggtgaaggacaacgggcagccgccgctg
tccgccaccgtctcggtggtcctcacggtggtggacggcgtgcccgagtccttatccgac
tatggggacctgacgctcagcccccagcccccctccaacctcgccctctacctcatcgtg
tctctcagcaccgtatcgctcatcttcctcgtggctatcatcgtcctggccgcggtcaag
tgctacaaggaccgggagaccccgagtggctacaacctgccccccttggcgcgctgctgc
tgcggcggcttccagcccgagcctcccccggacgtcttcaaaaaatccaacctcaacctg
cagatttcctccacggccaacaaagtgcccaccaactgcgtggaggtcagcggcagcggc
ggcctgactcagccttattgctataaagtctgcttgagcccggagtcgtccaaaagcgac
ttcatgttcctgaagccgtgcagccccgggagcgcgccgcgcaacaacgaggccaagggc
gccgagcacccgtggagcgcgtctgtcaacaacggagccaacacccccaatgagctgaag
cagccaaacacagattggaccctcacaaagaaccagaattcgtctatcaaaagttacaat
tccatcaacatggatgggacgctaatgcgcaaggccatgcacgccgacccggaaaactac
gtcacgtccatggcgccgggacagtactggacgtgggggactcgcgtgagggccgcgaaa
gactataagatgtccccgtcacccggcggcggcgttgttccctcccggccgtggactcct
cggtgcacccctccgcccctgcggcaacctacgaaccccccgcccccgcccccgcccccc
gactaccaccacaacgtgtacatccccgggacgccgtcgggcttctgcaccctgaggccc
gcggcgcagcagcgcagcgacttggacgtgcgcaactctttctccaccttcggcaagaag
cggcggctccagatgtcgccccagggggaggccgccgtcatcaataacgacctgtacaac
gattga
DBGET
integrated database retrieval system
