KEGG   Syngnathoides biaculeatus (alligator pipefish): 133508807
Entry
133508807         CDS       T09681                                 
Symbol
smu1a
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sbia03041]
    133508807 (smu1a)
Spliceosome [BR:sbia03041]
 Complex B
  Other components
   Complex B specific factors
    133508807 (smu1a)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_EML_2 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd LisH_TPL Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_TEP1_C WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_BBS7 Beta-prop_VPS8 WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_WDR75_2nd VPS8_N DUF7165 Beta-prop_NOL10_N TFIIIC_delta zf_topless LisH LisH_PAC1
Other DBs
NCBI-GeneID: 133508807
NCBI-ProteinID: XP_061691223
LinkDB
Position
11:13288613..13296023
AA seq 513 aa
MSLEIESADVIRLIMQYLKENNLHRSLAILQDETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLVDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLSRHIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNMMMMDDAVLCMSFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCLSFCKDSSQILSASFDQTIRIHGLKSGKSLKEFRGHASFVNEATFTPD
GHHIVSASSDGTVKVWNVKTTECSSTFKPLGSSAGTDITVNNVLLLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIATYAEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctctggagattgaatcggcagacgtgatccgactgatcatgcagtacctgaaggag
aacaacctgcacaggtcgctggccatcctccaggacgagaccaccgtgtcgctcaacacg
gtggacagcatcgagagcttcgtggccgacatcaacagcggccactgggacactgtcctc
caggccatccagtccctcaagctgcccgacaagaccctcgtggacctttacgagcaggtc
gtgctggagctcatcgagctgagagagttgggcgcggcgcgttccctcctcaggcaaacc
gacccgatgatcatgttgaagcagacgcagccggagcggtacatccacctggagaatctg
ctggcccgctcctactttgatccccgcgaggcgtacccagacggcagcagcaaggagaaa
cgtcgggcggccattgctcaggccttggcgggggaggtcagcgtggtgccgccgtcccgt
ctgatggctctgctgggccagtcgctcaagtggcagcagcatcagggtctcctccccccc
gggatgaccatcgacttgttcaggggcaaagcggccgtcaaagatgtcgaggaggagcgt
ttccccacgcagctcagcagacacatcaagtttggccagaaatcccacgtggaatgttcc
aggttctcccccgacggccagtatttggtgaccggctccgtggacggcttcatcgaggtg
tggaacttcaccacgggcaaaatccgaaaggatctgaagtaccaagctcaggataacatg
atgatgatggacgacgccgtgctgtgcatgagcttcagtcgagacaccgagatgttggcc
accggcgcccaagatggaaagatcaaggtgtggaagatccagagcggtcagtgtttgagg
aggtttgagcgcgcccacagcaagggggtcacctgcctgagtttttgcaaagacagcagc
cagatcctcagcgcctcctttgaccagaccatcaggatccacgggctgaagtctggcaag
tccctgaaggaattccgcggccacgcgtcgttcgtcaacgaggccacgttcactcccgac
ggccaccacatcgtcagcgcctcctccgacggcaccgtcaaggtttggaacgtgaagacc
accgagtgcagcagcactttcaagccgctgggctcgtcggccggcaccgacatcaccgtc
aacaacgtcctcctgctgcccaagaacccggaacactttgtggtgtgcaaccgctccaac
accgtggtcatcatgaacatgcagggacagatcgtgaggagcttcagttcgggtaagagg
gaaggcggcgactttgtgtgctgcacgctgtcgccgcgcggcgagtggatctactgcgtg
ggcgaagactttgtgctctactgcttcagcaccgtcacgggcaagctggagagaacgctg
acggtccacgagaaggacgtgatcggcatcgcccaccacccccaccagaacctcatcgcc
acctacgccgaggacggcctcctgaagctctggaagccctga

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