Syngnathoides biaculeatus (alligator pipefish): 133508870
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Entry
133508870 CDS
T09681
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133508870 (rlim)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133508870 (rlim)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133508870 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
133508870
NCBI-ProteinID:
XP_061691364
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All DBs
Position
11:25269364..25278891
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AA seq
643 aa
AA seq
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MEGSDSSEQSGSDQLESQRRRQLDRLDREEAFYQFVNNLSDDDYRLMRDNNLLGTPGEAT
EDELFSRLQNIKNDAEQQTNTPSTENVEDPAAIIEQPETSEDPANGDSLLEWLNTVRRTG
NTTRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQQPPESQAENGI
PEPPVLMETGVVEERVVEQMAVIVEPEPEPEPEREETVSNETHGDPSSSPVVVSVQPTLS
LSLRRGRRRARSRSSEPCRTRARAARSRSPLRSDQMEELPNPRFAHTSQGPSTDTSAPHV
PQVEGSSRTRQHVLSRQSAAEGDIQQPRIETEQTPETQSAVSHEGESGIEGGAAGRRPPT
IMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTY
VSTIRIPIRRISDASLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDSNRAASASVD
LAENTSNLDAPTLTEPVVDEPPVPTGESARTVEPAVDEGLATAPPAPGGRARPRAPVSLE
EPRSLPLLRLAHFFLLNDEDEDQPQGLTKEQIDNLAMRNFGESDALKTCSVCITEYAEGN
KLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSTNRESVV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacagttcagagcagagtggcagtgaccagctggagtcccagcgtcgg
aggcagctggatcgtcttgacagagaagaagccttctaccaatttgtcaacaatctgagt
gatgacgactatcgtcttatgagggacaacaaccttttgggcaccccgggagaggcaact
gaggatgagctgttcagtagacttcagaatatcaaaaatgatgcagagcagcagactaac
acaccaagtacagaaaatgtagaggatcctgctgcaattatagaacaacctgaaacctca
gaagatcctgctaatggtgatagtctcctagaatggctcaacacggtgaggcgcacaggc
aacacaaccagaactggtcatcggggaaaccagtcatggagggcagtaagtcagaccaac
ccaaacagtggggactttcgcttcagcctggaaatcagcgttaatcgcaacttagctgag
cagcaggcagctgctgaaggagaacagcagcctccagagtctcaagcagaaaatggaata
cctgaaccacccgttctcatggagacaggagtggtagaagaacgagtagttgagcaaatg
gctgtcatagtagagccagagccagagcctgaacctgaacgggaagagactgtttccaat
gagacacatggagacccctccagctcaccagttgttgtctcagttcaacctacactttct
ctgtctctacgtagaggacgtaggagagctcggagccgcagttctgaaccatgcagaacc
agggctcgtgcagcccggagccgttcccccctccgttcagatcagatggaagaactgcct
aatcctcggtttgctcatacatctcaaggacccagcactgataccagcgctccacatgtg
cctcaagtggagggtagttctcggactcgacagcatgtgctttccagacaaagtgctgca
gagggtgatattcagcagcccaggattgaaacggaacaaactccagagacccaaagcgct
gtttctcatgaaggggaaagtggaattgaaggtggtgcagctggacgaaggccacctact
ataatgcttgatcttcaggtgcgtcgggtgcgtccgggtgaatatcgccaaagggacagc
attgccagccgtacacgttcgcggtcacagaactcaaacaacacatttctttatgaaagt
gagcgtggtggatttcgcaggactttctcacgctctgagcgtgctggtgtccggacctat
gtcagtacaatccgtatccctatccgtagaatatcggatgcaagtttgggagaggcgacc
tcaatggctctccagtctatgattcgacagatcatgaccggcttcggtgagctcggctac
ctcatggattcggactcagattcttccgattccaaccgtgcagccagtgcatctgtggat
ttggctgaaaacaccagtaacctagatgcccccactcttactgaacctgttgttgatgaa
ccacctgtgcctacgggagagagtgcaaggacagttgagcctgctgtcgatgaaggactt
gccactgccccgccagcccctggtggcagggctagacccagagcccctgtcagccttgaa
gagccaaggtcattgcccctcctccgactggctcacttcttcctattaaatgatgaagac
gaggaccaaccccaagggctgaccaaagaacagattgacaaccttgccatgcgcaacttt
ggagaaagtgacgccttgaagacttgcagtgtttgtataacagagtatgcagaaggaaac
aagctccggaagcttccttgctcccatgagtatcatgtgcattgcattgatcgctggcta
tcagaaaactccacctgcccaatctgtcgcagggccgttctggtgtctaccaatagagag
agtgtcgtgtag
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