Syngnathoides biaculeatus (alligator pipefish): 133508971
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Entry
133508971 CDS
T09681
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04010
MAPK signaling pathway
sbia04020
Calcium signaling pathway
sbia04510
Focal adhesion
sbia04540
Gap junction
sbia04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133508971 (pdgfc)
04020 Calcium signaling pathway
133508971 (pdgfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133508971 (pdgfc)
04540 Gap junction
133508971 (pdgfc)
09142 Cell motility
04810 Regulation of actin cytoskeleton
133508971 (pdgfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sbia04052
]
133508971 (pdgfc)
Cytokines and neuropeptides [BR:
sbia04052
]
Cytokines
Growth factors (RTK binding)
133508971 (pdgfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
133508971
NCBI-ProteinID:
XP_061691546
LinkDB
All DBs
Position
11:15340417..15388726
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AA seq
348 aa
AA seq
DB search
MIPPSFLILLASLLQPGGSEAQSSHVSKFLPPGGKEQNGVQESHQEKVISVAGEGTIHSP
DFPRTYPRNIVLVWRLVAESNVRIQLTFDDRFGLEDPEDGICKYDFVELEDPSDGSTLGR
WCGWQAPPAVLHSKSSEVRVRFVSDEYFPSEPGFLIRYTTQPAVPAEAEPPTQQDLQELS
AAVSGLRTVEEVMQYLEPERWRLDMDDLYKPTWQVLGKSFIQNKKAAGGADLNALWEESQ
LYSCTPRNLSVSLREELKRTDVIFWPSCLLVRRCGGNCACCAHRCYDCRCQPVRVASKFH
EVLLLKHRSGGRGLQKSMTDVALEHHEECACACKDGDNADNSAPLGHV
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgatccctccatcattcctcatccttctcgcgtcgcttctgcaaccaggtggctcggag
gctcagtcaagtcatgtcagcaagtttctccccccaggcggcaaggagcaaaacggagtg
caggagtcccatcaggagaaggtgatctcggtggccggagaggggacgatccacagcccg
gatttccctcgcacttatcccaggaatattgtgttggtgtggagactggtggcggagagc
aacgtgaggatccagctcactttcgatgacaggttcggcctggaagacccggaggacgga
atatgcaagtatgactttgtggaactggaggatcccagcgacgggagcaccctgggccgc
tggtgcggatggcaggccccccccgcggtcctccactccaaaagcagcgaagtccgcgtc
cgtttcgtctcggacgagtacttcccgtccgagccgggcttcctcatccgctacactacg
cagcctgcggtacctgcggaagccgagcctccgacccagcaggacctccaggaactgtcg
gccgccgtgtcgggcctgaggacggtggaggaggtcatgcagtacctggagcccgagcgc
tggcggctggacatggacgacctgtacaaacccacgtggcaagtgctcggcaagtccttc
atccagaacaaaaaggccgcaggaggggccgacctcaacgcgctgtgggaggaatcccag
ttgtacagctgcacgccacgcaacctgtccgtgtccctgcgcgaggagctcaaacggacc
gacgtgattttctggcccagctgcctcctggtgaggcgctgcggcggcaactgcgcctgc
tgcgcccaccgctgctacgactgccggtgccagcccgtccgggtcgccagcaaattccac
gaggttctgctgctgaagcaccgcagcggaggccgaggtctgcagaagtccatgaccgac
gtggccttggagcaccacgaggagtgcgcgtgcgcgtgcaaggacggcgataacgccgac
aatagcgcgccgctcggacacgtttaa
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