Syngnathoides biaculeatus (alligator pipefish): 133509040
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Entry
133509040 CDS
T09681
Symbol
pdlim7
Name
(RefSeq) PDZ and LIM domain protein 7
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133509040 (pdlim7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
133509040 (pdlim7)
Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
133509040 (pdlim7)
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GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
PDZ_2
DUF4749
Motif
Other DBs
NCBI-GeneID:
133509040
NCBI-ProteinID:
XP_061691660
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All DBs
Position
11:23303656..23337062
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AA seq
557 aa
AA seq
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MQLISSFFLLNHITGRYYCRLIWINHGPHLDRPLSGVPPRARDSAAGHVTSDVSAANGTS
TAASSSRIRLEEVRRSGSFSLCRPVVVLLLVNTKEIFEAMNVYSVTLSGPAPWGFRLQGG
KDFSMPLTVSRLTPGGKATQAGVEVGDWVVCIDDLNAEDLTHVEAQNKIRAASDSLTLTL
NRQQPVQGIPQMVQSVFNMPCFIPNDRSKKRLIQDTEDWQPRTGTTQSRSFRILAQLTGT
DFMQDPDDESMKRAREKFLTEIQSPRYARLRDWHHDRSARALNIKSHLLSSVAPTPSPAK
AQTANKPDGSKTASAATCPSAPSSRPPWVTDPNFADRFHPDKTSTVVTQHQQPVQPTPME
NRSSILQAAQQPPEGSGRTPVCGACNKVIRGRYLVALGRSWHPEEFTCSQCKVVLEEGGF
FEERGSVFCTKCHDNRYAPNCAKCKKKITGEIMHALKMTYHVQCFKCAACKTPIRNQAFY
MEEGEPYCERDYEKMFGTKCHGCDFKIDAGDRFLEALGYSWHDTCFVCALCQINLEGKTF
YSKKDKPLCKGHAFAPV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgatcagttcattttttctacttaatcacattacaggtaggtattattgtagg
ttgatctggattaaccacgggccccacttagaccgacctctttctggtgttccaccccga
gcgcgagactcggcagcgggccatgtgacctctgacgtctcggcagccaacgggacttcc
accgcggcttcctcctcgcgtatccgcctcgaggaagtccgacgctcgggtagcttttca
ctgtgccgcccagtcgtcgtactgctgctggtaaacacaaaagagatatttgaggctatg
aatgtgtactccgtaaccctcagtggcccagcgccatggggcttcaggctgcagggtggc
aaagacttcagcatgcccctcaccgtgtcaaggttgactccgggtgggaaggcaactcag
gctggtgtcgaggtcggagactgggtggtctgtattgatgacctcaatgcagaggacttg
acccatgtggaggcccagaacaagatcagagcagcatcagactccctcacactcactctc
aacaggcaacaaccagttcagggtataccccagatggtacaatctgtctttaacatgcct
tgttttatccccaacgaccgcagcaagaagaggttgatccaggacacagaggactggcag
cctcgcactggtaccacccagtcccgctccttccgcatcctggcccagctcactggcact
gacttcatgcaggacccagatgatgaaagcatgaagagggccagggaaaagttcctcact
gagattcagagcccccgctatgcccgtctaagggattggcaccacgacaggtccgctcgc
gccctaaatatcaaatctcaccttctttccagtgttgcgccaactccgtcacctgccaag
gctcagactgccaataaaccagatggatctaagacagcatcagcggcaacgtgcccctcg
gcaccttcctcccgacctccgtgggtcaccgatcctaattttgctgaccgttttcacccg
gataagaccagcacggtggtgacacagcaccagcagccggtccagcccacgccgatggaa
aaccgcagctccatcctgcaggcggcgcagcagccgcccgaaggtagtgggaggaccccg
gtctgtggcgcctgcaacaaagtcatcagaggtcgctacctggtggctctgggacgctcg
tggcaccccgaggagttcacgtgttcacagtgcaaggtggtcctggaggaggggggcttc
ttcgaggagagaggttccgttttctgtaccaagtgccacgataaccgctacgccccgaac
tgtgcaaagtgcaaaaagaagatcacgggggaaatcatgcatgccttgaagatgacctac
cacgttcagtgtttcaagtgtgcggcttgcaagactcccatcaggaatcaggccttttac
atggaggagggagagccttactgcgagagagattacgagaagatgtttggcaccaaatgt
cacggctgcgactttaagattgacgccggggatcgtttcctggaggctcttggttacagc
tggcacgatacgtgcttcgtctgcgctctgtgccagatcaacctggagggcaagacgttc
tactccaagaaggacaagcccctctgcaaaggccacgccttcgcccctgtgtga
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