Syngnathoides biaculeatus (alligator pipefish): 133509127
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Entry
133509127 CDS
T09681
Symbol
rab11fip5b
Name
(RefSeq) uncharacterized protein rab11fip5b
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133509127 (rab11fip5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133509127 (rab11fip5b)
Membrane trafficking [BR:
sbia04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
133509127 (rab11fip5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4254
Motif
Other DBs
NCBI-GeneID:
133509127
NCBI-ProteinID:
XP_061691848
LinkDB
All DBs
Position
11:complement(29667666..29700995)
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AA seq
1348 aa
AA seq
DB search
MMSLIDLDDDQRWVPTHVNVTVHRARGLRTKSKHGSRYLYAVVQVGKDKYTTGLVDKAEV
PVWSEECCFELLPGILEADGAAGGGRGAYPPGSADLVLTVMHRVLIGLDVFLGQTVIPLD
RMFLEGACLRDQWFKLDSKAGRKAKERGELQLTVQFTRNNMTASMFDLTAKDERRSAFGK
LKDRVTGRKRPDAESSSAIVPGRYAALSVTPGQPLDDECGGAIHDQDTAITEEKKSKVKD
FFKGKLRKSPDTRSCSSLASDSSASSMASDTLGPPPALGLLSDLPSSPVYTTVTRVDPHC
RDRDLTKTVLTSQHATKILTHKRAFSDEASKIMTSIPLTKPIMESVKGHQIMSPSKSSVC
INGSHVYDSEPSILKNAGVMPCKLVLQKCSPLSHSLQNLTKRSEDKDSFAEGRRWSFDKM
KNGGKEEEKDAQPVEVEGQPEATENSSSESSDKGWKLRKTLFSGGRSDSAPVKPYGIQAP
SISEGRLRGWFSSTDSKNKPRRKVSPKLESTTARSPPLPCPSVGSHCSSSSVSLPVEQNH
THPITPPSTPISPSNPFFEELQGSLPCAPSSSSFLYTSQHSGQDIPSPIQNAIPSIKRER
PKPVARRISLPEFPNCSRDCPMLVSVQDWEDSFDMFASNRLNSPKGNTSQMQQESTLEST
KRCTYLAENLHADYHVQEQQRYQKEPPPLPPRRPIKTSVNEIYSDGWLHRGQELAVHKEA
YLLSQTGVASLQHGREPEFKRPTSSVSSDSETSNSLNDNSQLYGIIPSLGFMSKETLKKY
EPLEDTTDFWGGMLFEQDLYGRIFKGNVSQTTLHIGNSTGIRNILNCETSVADHLKKSPN
SLLVSELKTVGTPPPVESRVSSIISQTPCINKNGTYLKNLRDLNMNVRNSDFEFIDSDGS
SQTKAVEDAKGLSSSSWIGPQLSQDSTAALNHTLATHADTLKNTNIPKSDSSLERITVSS
KMCKVSPVFQDFPLEINKSKIGETQEQPEAHQESSDDKTEMDCKDSNDNGSPQAVKELFP
RVVSARVRPKAIPRVDSSDNASRTDLGQQSSLMNEGPSSYQPTSSAPSPNLALDSNDDKV
SNCHCNLNDRPLVPSNDDSALLLGDCVTENPSEITFEVLHAKVAPHLRNPPKSEQGCTSP
TDTLGNIPLSPACCTSTPSSSTNMHGSGTSRSLIVAPYSTSSCTPDTTSTTDQLPFDALH
SLLTEKKWPACNLPHQESRPHLVKPLNQSEKKESRSVLEKLKSTISPGRTAQQVAAGPGK
IQEPADDRSALYEHLTNMELISLLLQQDMDMNKQQAASECQQAQLDKCEAELKKVKAQVR
DLEDYIDNLLLRIMEQTPTLLQVRSRHK
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgctcatcgatctggacgacgatcagcggtgggtgcccacgcacgtcaatgtc
accgtgcaccgggccagggggctgcggaccaagagcaaacacggcagccgctacctatac
gcggtggtccaggtgggcaaggacaagtacaccactggcctggtggacaaggccgaggtg
cccgtgtggtccgaagagtgctgcttcgagctcctcccgggcatcctggaggcagacggg
gcagctggaggcggccgcggagcctacccgcccgggagcgccgacctggtgctcaccgtc
atgcaccgagtcctgattgggctcgatgtgttccttggccagactgtcatcccgctggat
cgcatgtttttggagggcgcgtgcctgagagaccagtggttcaagctagattcgaaggcg
ggacggaaggccaaggagcgtggcgaattgcagctgacggtgcagttcacccgcaataac
atgaccgccagcatgttcgacctcaccgccaaggacgagcggcgctctgctttcgggaaa
ctcaaggatcgcgtcacagggagaaagcgccctgatgcggaatcttcctcagccattgtg
ccggggcgctatgctgctctttcggtgaccccgggtcagccgttggacgacgaatgtggg
ggcgccatccatgaccaagacacggcaataacagaggaaaagaagagcaaggtgaaagat
tttttcaaagggaagctgagaaagtcgcccgacaccaggtcatgctcatccctggcttcc
gatagcagcgcctcctccatggcgagtgacacacttggccctcctcctgctctcggcttg
ctctcagatctccccagctcacctgtctataccaccgtcacacgtgttgacccccactgt
cgagacagagatctaactaaaacagtgctcactagtcagcacgccacaaagattctgaca
cacaagcgagccttcagcgatgaagccagtaagatcatgacatcgatccctctaacaaag
cccatcatggagtccgtcaaaggccatcagatcatgagtccgtccaagtcttcagtgtgc
ataaatggcagccatgtgtatgactctgagccttcaatcctgaagaacgctggagtcatg
ccgtgcaagttggtcttgcagaaatgctccccactgtcccattccctacaaaacctcacc
aagcgaagcgaggacaaggattcctttgcagaagggcgacgttggtcctttgataagatg
aaaaatgggggaaaggaggaagagaaggatgctcaaccagttgaggtagaaggtcagcct
gaggctacagagaactctagttctgaatcttctgacaaagggtggaagcttagaaagacc
ttattctctggaggtaggagcgattctgctccagtaaagccatatgggatccaggctcct
tccatctctgaagggaggctcagaggctggttcagcagcacagactccaagaacaagcca
aggcggaaagtgtctcctaagctagaaagcaccacggctagatcccccccacttccttgc
ccctctgtaggcagtcactgttcctcctcctctgtttccctccccgttgaacagaatcac
actcatccaatcaccccgccatcaacccccatctccccgtctaatcccttctttgaggag
ctgcaggggtcccttccttgtgcacctagctcctcaagctttctgtacacttctcagcac
tccggccaggacatacccagtcccattcaaaacgctataccctccatcaagagggagcgt
cctaagcctgtcgctaggcggatatcgctcccggagtttcccaactgctcaagagattgt
ccaatgttggtgagtgtacaggactgggaagactcatttgacatgtttgcttcaaacaga
ctcaactcacccaaaggaaatacctctcagatgcaacaggaatctactctagagtccact
aagaggtgtacttatctggcagaaaacttacatgcagattatcatgtacaagagcaacaa
agataccaaaaggagcctccaccattacctccaaggagaccaataaaaacgtcagtgaat
gagatatactctgatggttggctccacagaggccaagagctggcagtccacaaagaagcc
tatctactgtctcaaactggagtggcctcactgcagcatggaagagagccagagtttaaa
agaccgacttcaagtgtatcatcagacagcgagacttcaaattccctcaatgacaactct
cagctttatggaatcatcccttccctgggatttatgtccaaagagacgctcaaaaagtat
gaacccttggaagacacaactgacttctgggggggcatgctatttgaacaagacttgtat
gggcgaattttcaagggaaatgttagccaaacaactttacatatagggaacagcacaggg
atcaggaatattctaaattgtgagacttccgttgctgaccatttgaagaagtcacctaat
tcactcttagtttcagaattaaagactgttgggacgccccctccagtagagtctagagta
tcttctatcataagtcaaactccatgcatcaacaaaaatgggacttacttgaaaaaccta
cgtgatctaaacatgaatgttaggaattcggattttgaatttatagattcagatggatct
tctcaaacaaaggcagttgaagatgccaaaggtctcagcagctcaagttggatcggtcca
cagttgtcacaagattccacagcagctcttaaccacacattagctacacatgctgacacc
ttaaaaaacaccaacatacccaaaagtgactcatctttggaaagaatcacagtatctagt
aaaatgtgcaaagtctctccagttttccaggactttccacttgagatcaacaagagtaaa
atcggtgaaacccaggagcaacctgaggcccatcaggagtccagtgatgataaaacagaa
atggactgtaaggactctaatgataatgggagccctcaagctgtgaaagaattgtttcca
cgggtggtcagtgcacgtgttagacccaaagcaattccaagagtggacagcagtgacaat
gcaagcagaactgatcttggtcaacaatcttcactcatgaatgaaggtccgtcatcatat
caacctactagctcagctccatctcccaatctggcattggatagcaatgatgataaagtc
tcgaactgtcattgcaatttaaacgataggcctctagtaccttcgaatgatgactcagca
cttctattaggggattgtgtgaccgaaaacccctctgagattacttttgaagttcttcat
gccaaagttgcccctcatttgagaaatcctccaaagtcagagcagggttgtacttcccca
actgatactcttggtaatatccctctttcccctgcttgttgcacctccacaccctcctca
agcacaaatatgcatggcagtggaaccagtaggtctctgattgtggcaccctactcaacc
tcctcctgcactccagacactacctccaccactgatcagctccccttcgatgcactgcac
tcacttttgactgagaagaaatggccagcttgcaacctgccccaccaggagagcagacca
cacctagtgaaacctttaaaccaatcagagaagaaggagagccgttcagttcttgagaaa
ctcaagtccaccataagcccaggacgcacagcccaacaggtggcagctggaccagggaaa
attcaggagcccgcagatgacaggtctgcactgtacgagcacctgacgaacatggagctc
atctccttgctgctgcagcaggacatggacatgaacaagcagcaggcggcgtccgagtgt
cagcaagcgcagctggacaaatgcgaggcagagctgaagaaggtgaaggcgcaggtccgc
gacttggaggactacatcgacaacctgctgctgcgcatcatggagcagacgcccacgctg
ctgcaggtgcgctccagacacaagtga
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