Syngnathoides biaculeatus (alligator pipefish): 133509181
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Entry
133509181 CDS
T09681
Symbol
neil3
Name
(RefSeq) endonuclease 8-like 3
KO
K10569
endonuclease VIII-like 3 [EC:3.2.2.-
4.2.99.18
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133509181 (neil3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133509181 (neil3)
Enzymes [BR:
sbia01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
133509181 (neil3)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
133509181 (neil3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_GRF
H2TH
Fapy_DNA_glyco
Zn_ribbon_RanBP
zf-FPG_IleRS
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
133509181
NCBI-ProteinID:
XP_061691932
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All DBs
Position
11:15404282..15418643
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AA seq
525 aa
AA seq
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MVEGPGCTLNGEKIRSRVQKGQSVKELRGSLLTTKGIDQERSNVIQRLKGCQYTGVDTLG
KELFLYFGPKALRVHFGMNGSMRINSAEKKHGRGGSSVPVLEIHLTKDRLCFFESTVEMR
SSDDCERRVRALQPLDVCSPAFSPSRSAEAARRHGGRMLCDVLLDQAVMPGVGNIIKNEA
LFDAGLHPAAKVEQLSDEQLHHLVKMTRDFTLLFYKCRKSASALHTHYKVYKRPQCGRCS
GAVTVCRLGDNGRMTYFCERCQKRDGGDVHVSQLPVRNTLIGWVSSGVAANENVAKREEE
DWPCHLCTLLNPPAAKNCDACLTARAPLREEDSSPPSSTDLVRYPHTAFAKPREERKLNW
RSAFGTSTLRFSDLSEALEPSRGGAPSPSGQPCKKMRIDGGPSNKSAGRTTAAEKPGSSA
PSSPPSCKAHRRPSVLRVVHKDGDNKGRRFYACSLPREAKCDFFQWADLHFPSCHHGKRC
VMRTVLKLGPNNGRDFYTCGSRKGKQCDYFQWAQAGPAVSVLPGC
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaggtccgggatgtacattgaacggtgagaagatccgttcgagggtccagaaa
ggacaaagtgtgaaagagctacgaggcagcttgctcacaacgaaggggatcgaccaggag
agaagcaacgttatccaacgtttgaaagggtgtcagtacacgggcgtagacacgctgggg
aaggagctttttttgtattttggacctaaagcgttgagagtccactttggcatgaatggc
tctatgcgaatcaacagcgcagagaagaaacatggcagggggggcagctccgtcccagtg
ctcgaaatccacctgaccaaagacaggctgtgcttcttcgagagcacggtggaaatgagg
tcgagtgacgactgcgagcggcgtgtgcgagctctccagcccctggacgtgtgctcgccg
gcgttcagcccctcacgctcggccgaggcggcgaggcgccacggcggcaggatgctctgc
gacgtcctcctcgatcaggccgtcatgccgggagtgggcaacatcattaaaaacgaagcc
ctgttcgacgcgggcctacacccagccgcgaaggtggagcagctgtcggacgagcagctt
caccacttggtgaagatgacgcgggatttcacgcttctcttttataagtgtcgcaagtct
gcctctgcgctacacacgcactacaaagtctacaagcgtccccagtgcggccggtgttca
ggcgccgtcaccgtctgccgtctcggcgacaacggcaggatgacgtacttttgcgagcgc
tgtcagaagcgtgacggcggggacgtccatgtcagtcaacttcctgtcaggaacaccctg
attggctgggtaagcagcggcgtagctgcgaatgagaacgtggcaaagagggaggaagag
gactggccttgtcacctgtgcacgctcctcaatccgcccgctgccaaaaactgcgacgct
tgcctcactgccagagctcccctccgagaggaagactcctctccgccctcctccaccgat
ctggtgcgatatccccacaccgccttcgcgaagccccgagaggagcgtaaactcaactgg
cgctccgctttcgggacgtccactctgcgtttctccgacttgagcgaggcgctcgagccg
tcccgcgggggggcgccgtccccgtccggtcagccgtgcaagaaaatgagaattgatggc
ggtccctctaacaagtcggctgggcgcacaacagcagcggagaagcccggctcctcggcc
ccctcgtcccccccctcgtgcaaggcgcaccgccgcccgtccgttctgcgagtggtccac
aaggacggcgataataaaggacgacggttttacgcctgctcgctgccccgggaggcaaag
tgcgacttctttcagtgggccgacttgcactttccctcctgtcaccacggcaaacgatgc
gtgatgcggaccgtgctcaagctgggacccaacaacggccgcgacttctacacctgcggc
tcccgaaagggtaaacagtgcgattatttccagtgggcgcaggccggacctgccgtttct
gttctgccgggctgctag
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