Syngnathoides biaculeatus (alligator pipefish): 133509370
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Entry
133509370 CDS
T09681
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03430
Mismatch repair
sbia03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
133509370 (mlh1)
03460 Fanconi anemia pathway
133509370 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133509370 (mlh1)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
133509370 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
133509370
NCBI-ProteinID:
XP_061692219
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Position
12:17756503..17767097
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AA seq
744 aa
AA seq
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MTFGISKYFLFVCPDLARFVQPQTTHVWPILPDVTQDGGQGNPGTVVAASSEILDAKSTN
IQVTVKDGGLKLLQIQDNGTGIRREDMEIVCERFTTSKLQTFEDLSAIATYGFRGEALAS
ISHIAHVTITTKTVDGKCAYRGSYSDGKLKGPLKPCAGNQGTQILAEDLFYNVSTRRKAL
KSPSDEYARIVEVVSRYAIHNSGKSFSVKKQGETVADVRTLPNASVVDNIRGIFGNAVSR
ELMEVCSEDHMLGFKMKGYISNANYSVKKCIMVLFINHRLVESSALKKAVETVYAAYLPK
NTHPFLYLSLEIAPQNVDVNVHPTKHEVHFLHEDGIIESVQKHIEGKLLGSNSSRTYFTQ
TLLPGLSACGAAEVKSSSGTSESAERVYAHQMVRTDCRAQKLDAFLQSKEKPLLEAGPAG
PSGADSEAKTAEPDDVDMVVALNQMETELSKTEERNEKVAEVQRKRPRKEQQPETEDGRD
QDPTAADTPKRRVIKLNSIKELRGEISDGAHKGLQEMLQNHTFVGCVNPQWTLIQHHTKL
YLLNTTTLSQELFYQILIYDFGNFGVLRLSTPAPIYELAMLALDSEESGWTEEDGPKEGL
AQYIVDFLKNKAEMLEDYFSMEIDQEGNLKGLPLLLDQYTPVMEGLPMFILRLATEVNWD
HEKECFRDFSRECSMFYSIRKQYILEAKPREEQDEVLNSWRWNVEHILCKAFRSLISPPN
HISEDGTVLQIANLPDLYKVFERC
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgacttttggaatatcaaaatacttcctctttgtttgcccagatttagcgcggttcgta
cagccccaaactacgcacgtgtggcccatattaccggatgtaacacaggacggcggacaa
gggaatcctgggactgtggtggcggcgtcatcggaaattctggatgcgaagtcaacgaac
atccaggtgacggttaaagacggcgggctgaagctgctccagattcaggacaacggcacc
ggcatccggagagaagacatggaaatagtttgtgagcgttttaccacaagcaagctgcag
acattcgaggacctctccgccatcgcaacttatggcttcagaggagaagcccttgccagt
ataagccacattgcccatgtaaccataacgacaaagacagtggatggcaaatgcgcttat
agaggcagctacagcgacggtaaactgaaaggccctctaaaaccctgtgctggaaaccag
ggaacacaaatactggcagaggatctcttctacaacgtgtccaccaggaggaaagcttta
aaaagccccagcgacgagtacgccaggatcgtagaggtggtcagcaggtatgccatacac
aattctgggaaaagcttctctgtcaagaagcaaggagagacggtagcagatgtgaggact
ttacccaacgcgtcagtggtggataacattcgaggaatcttcggcaatgcagtcagcagg
gagctgatggaggtctgcagtgaggaccacatgctcggctttaagatgaagggctacatc
tctaacgcaaactactccgtcaagaaatgcatcatggtcctcttcatcaaccaccgtctg
gtggagtcgagtgcgctgaaaaaagcagtggagacagtttatgcagcgtaccttcccaag
aacacacacccgttcctatatctcagtttagagatcgcccctcagaacgtggacgtgaac
gttcaccccacgaagcatgaggtgcatttcctgcacgaggatggcatcatcgagagcgtt
cagaagcacattgagggaaaactgctgggatccaattcctcacgcacatacttcactcag
actttgctgcccgggctgtctgcgtgcggtgcagctgaggtcaagtcaagcagcggcaca
tccgagtctgccgagcgcgtctacgctcatcagatggtgaggaccgactgtcgtgctcag
aagctggacgctttccttcagtcaaaggagaagccgcttctcgaggccggacccgccggg
ccgagcggcgccgattccgaggccaaaaccgccgagccggatgacgttgacatggtggtg
gccctgaaccagatggagacggagctgtcgaaaaccgaggagagaaacgaaaaagtggct
gaggtccaaaggaaacgtcccaggaaagagcagcagccggagacggaagacggacgggac
caggacccgacggccgcagacacgcccaagagacgagtcatcaaactgaacagcatcaaa
gagttgagaggcgagattagcgacggtgcacacaaaggtcttcaggagatgttgcagaac
cacacatttgtgggctgcgtcaaccctcagtggactctgatccagcatcacaccaaactt
tacctgctcaacacgacaacactcagccaggagctcttctaccaaatcctcatctatgac
tttgggaactttggtgtactcagactatctacaccggctcccatttacgagctggccatg
ttggctctggactctgaggagagtggctggactgaggaggatggacccaaagaaggcctg
gctcagtacattgtggacttcttgaagaacaaagcagaaatgctagaggattatttttcc
atggagatcgatcaggagggcaatttgaaaggactgcccttgttgcttgaccagtacaca
cccgtcatggaaggtctgcccatgtttatcctccggctagcaactgaggtgaactgggac
catgaaaaagaatgcttccgagacttcagcagagagtgcagcatgttctactccataagg
aagcaatacatcctcgaggccaaacccagagaggagcaggatgaagtcctgaactcgtgg
cgttggaacgttgagcacatcctgtgcaaggctttccgctcgctcatcagtcctcccaat
cacatcagtgaggacggcacagtgctgcagattgccaatttaccggatctctacaaagtg
tttgagaggtgttag
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