Syngnathoides biaculeatus (alligator pipefish): 133509400
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Entry
133509400 CDS
T09681
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133509400 (ddx4)
Enzymes [BR:
sbia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133509400 (ddx4)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Gene silencing
piRNA pathway
133509400 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
133509400
NCBI-ProteinID:
XP_061692307
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All DBs
Position
2:15342102..15371532
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AA seq
573 aa
AA seq
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MDFFDEQECAPFGESNHFQDYSRGRRGRGVGFRSGFSSEMGSSNNHGRERGAFKGRGGRG
AGRGGFGGGYRGANEEIFTQESEQTENPDDSVRPKVTYVPPALPEDEASVFEHYQQGINF
DKYDDILVDVSGTNPAPAIVTFDEATLCESLRKNIQKSGYSKPTPVQKHAIPIISAGRDL
MACAQTGSGKTAAFLLPILQQLMLDGVAASSFRELQEPEAMIVAPTRELINQIFLEARKF
SYGTCVRPVVVYGGVNTGFQLREISKGCNIVCGTPGRLLDVIGRGKIGLTKLRYLVLDEA
DRMLDMGFEPDMRRLVSSPGMPGKENRQTLLFSATYPEEIQRLAVDFLKMDYLFLAVGIV
GGACSDVEQTFVQVTKFSKMEQLLDLLKTTGKERTIVFVETKRQADFVATFLCQENLPTT
SIHGAREQREREQALGDFRRGKCPVLVATSVAARGLDIPDVQHVVNFDLPKNIEEYVHRI
GRTGRCGNIGRAVSFFDLEKDNELARSLVTILSKAQQVVPSWLEESAFSGGPTSFNLFNK
SFASSDSRKFQQAGGERRQQVPQVAIADDDDWE
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggattttttcgatgaacaggagtgtgcaccttttggagaatccaaccactttcaggat
tacagtcgcggcagaagaggaagaggagtaggatttcggagcggcttttcttcagaaatg
ggaagttcgaacaatcatggaagagagagaggagctttcaaaggaagaggaggtcgaggt
gctggcagaggcggctttggaggaggatatcgtggtgcgaacgaggaaatatttacccaa
gagtcagagcagacagaaaacccagatgatagtgtccgaccaaaagtcacctatgttcct
ccagccctacctgaagatgaggcctctgtttttgaacactatcagcaaggcattaatttt
gacaagtatgatgacatcctagtggatgtgagtggaaccaacccagcacccgctattgtg
acgtttgatgaggcaaccttgtgtgagtccctgcgaaaaaacatccaaaaatctggttat
tcaaagcctaccccagttcagaagcatgctatcccaattatctctgctggtcgagatctt
atggcttgtgctcagactggatctgggaaaacggctgcattcctacttccaattctacaa
cagctaatgcttgatggtgtggctgccagcagtttcagagagctgcaggagccagaggca
atgattgttgccccaacaagagagcttatcaaccagattttcctagaggctaggaagttt
tcctacggaacatgtgtgcgtccagttgtggtatatggtggggtaaacactggatttcag
ctaagagaaatttcaaagggctgcaacatcgtgtgtggaacaccaggaagactgttggat
gtgattggacgaggaaagattggattgactaagcttcgatatctggttctggatgaggct
gacaggatgttggatatgggctttgagcctgacatgcgccgcctggttagttcacctgga
atgcctggcaaagaaaatcgccagactctgctgtttagcgctacctaccctgaagagatc
cagaggttggctgttgacttcctcaagatggactatttgttcctggctgttggcatagta
ggcggagcttgtagcgatgttgagcagacatttgtgcaagtcactaagttctcaaagatg
gaacagcttcttgatcttcttaagaccactggaaaggagcgcacaatagtatttgttgag
acaaagagacaagctgattttgttgccactttcctttgccaagagaaccttcccacgacc
agtattcacggggctcgtgaacagcgggagcgagaacaggctttgggagacttcaggaga
ggcaaatgtcctgtccttgttgccacgtcggtcgctgcccgtgggcttgacattccagac
gtgcagcatgtggtgaactttgacctccccaaaaacatcgaggagtatgtccaccgcatc
ggcagaaccggtcgctgtggtaatattggcagggcagtgtccttcttcgatctggaaaag
gacaatgagctggctcgctccttggtcacgatcctgtccaaggcccaacaagtagtgcca
tcatggttggaggagtctgccttcagtggaggacccaccagctttaatctgttcaacaag
agctttgcttcctcagactcaaggaagtttcaacaggcaggaggtgagaggcgccagcaa
gttcctcaggttgcaattgctgacgatgatgattgggagtag
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