Syngnathoides biaculeatus (alligator pipefish): 133509432
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Entry
133509432 CDS
T09681
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133509432 (btaf1)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
133509432 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_2
TPR_Trm732_C
Vac14_Fab1_bd
HEAT_EZ
TOR1L1_N
Cnd1
Motif
Other DBs
NCBI-GeneID:
133509432
NCBI-ProteinID:
XP_061692379
LinkDB
All DBs
Position
12:16611404..16633729
Genome browser
AA seq
1851 aa
AA seq
DB search
MAVTRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLTYLRSPNWDTRI
AAGQAVEAIVKNIPEWNPAPNPKEESSPEDPACDKLSFYHFDISRLLKHGASLLGSAGAE
FELQDDKMCEMDPKERLACQRKLLQKKLGLDIGAAIGMDTEELFNDEDLDYTFQSSGSRR
HGSKLSVGSCSRDNLPIQAAELIDSEFRPGMSNRQKNKAKRLAKIVAKQKSRDLDLNEKS
NDSFESEPEDKRRKTTSMVIDQPATEHKVLINKVLDSASLSEEIQEWPLESFSEELCNDL
FNPSWEIRHGAGTGLREILKFHGAGGGKLVGSTTEQMLQQHEEWIQDLVIRLLCVFALDR
FGDFVSDEVVAPVRETCAQTLGVALRYMNETGVSMTVDVLLKLLKEDQWEVRHAGLLGIK
YALAVRQDLISVLLPRMLPAITVGLQDLDDDVRAVAAAALIPVVEGLVQLLPNKVPFIVN
TLWDALLDLDDLTASTNSIMTLLSSLLTYPQVRQCSMQQSLTVLVPRVWPFLRHTISSVR
RAALETLFTLLSKSDQKCAMWINPIVQDMLRHIFQSCILESNEEILELIQKVWTELLSQA
PQQYVVAASCQWMGAWLCLMMQASHIPIDLNMLLEVKGRSKDKGGSKARQGTNQVKETVQ
EYIAGAETVTDDPVSRDYVVIRARLMAAKLLGALCRCICDPNLNAASQEIRPAESLGQLL
LFHLNTKSALQRIAVALVLSEWAALQKDCPMVSSTVQPRLLAILSEQLYYDEIAIPFTRM
QNECKQLIALLSEAHIDIQDRLNCSVFTIDQANELLTTIFTESTAGVNVKTKPWQVLQSK
RQQAQATVIETSHEWQQLHLRVHMFTACAVINLQVFPDKLNPLVRPLMESIKREENTLIQ
GYAASFIAKLLQQCCGRTPCPNPKIIKNLCASVCADSSVTPSSACPVPPSQENSKGSGLD
KDCLHHTVNKTRGIMTLYRHQRAAFAITSKRGPVPKSSKAPPSDLPPGSTIGIDNDERKP
CLIQRRGAEYTLTTIARHFGVNLTKSLPYLWENTVGPLRTAVNENHVMDRQIQLERGDAA
AQELVNSLQVLEVMTGAMSCELKPLLLEHLPHLFTCLQHPYTAVRHMAARCVGVLSKISM
LETMDVFLECVLPWLAAIDDCTKQEGAVEALACVMEQLDVDIVPYIVLLVVPVLGRMSDP
SDSIRFMATQCFATLIRLLPLEAGIPDPPAMSADLVRQKARERHFLEQLLDSRKLENYNI
PVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRAQEYAK
TKAADCSPLPSLVVCPPTLTGHWVDEVGKFCAKDYLNPLHYTGPPTERIRLQHQVKKHNL
VVASYDVVRNDIDFFKNIKFNYCILDEGHIIKNGKTKLSKAIKQLAANFRVILSGTPIQN
NVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAMEALHRQVLP
FLLRRMKEDVLQDLPPKIIQDYYCNLSPLQIQLYEDFAKSRAKASIDDSISVASAEQEEK
PRLKATGHVFQALQYLRKLCNHPSLVLTPQHPEYKRITDQLSGQNSNLRDIQHAPKLSAL
KQLLLDCGLGGGGSEGTTEAVVAQHRVLVFCQLKSMLDIVEHDLLKPKMPTVTYLRLDGS
VQAGLRHSIVSRFNNDPSIDLLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRA
HRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTIISQENASLQSMGTDQLLNLFTL
DKDERGERGEQSTSTSRKASMKSVLDGLGELWDQQQYDSEYNLDSFMHSLH
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaacaagacttgatcgtttgttcatcctgcttgacactggaacaactccagta
actagaaaagcagcagcccagcagctaggagaagtggtgaaactccacccacatgagctc
aataatctattatcaaaggtcttgacctatctaaggagtcccaactgggacactcgtatt
gcagcaggccaagcagtcgaggctattgtgaaaaatattccggagtggaaccctgcccca
aatcctaaagaagaatcatcaccagaggatccagcttgcgacaagctgagcttctatcat
tttgacatttcccgcctactcaaacatggcgcatctcttcttggatctgctggggcggag
tttgagttgcaggatgacaaaatgtgtgagatggaccccaaggaacgtcttgcctgccaa
agaaagcttcttcagaagaagttggggcttgacataggtgctgcaattgggatggacacg
gaggagctgtttaatgacgaagaccttgactatacgtttcagtccagtgggtcaagacgt
catggaagcaagctcagtgtaggatcctgctcccgtgacaatcttcctattcaagctgca
gaattgatagactccgaattccggccaggcatgagcaaccgccagaagaataaggcaaag
aggctggcaaagatagttgcaaaacaaaaatccagagacttggatctgaatgagaaaagt
aatgacagttttgaaagtgagcccgaagacaaacgaaggaaaaccaccagcatggttatt
gaccagccagcaaccgagcataaagtcctaattaacaaagttttagatagtgccagtctt
tcagaggagatacaagagtggcctttggaaagcttcagtgaggaactctgcaatgacctc
tttaatccttcttgggagatccgtcatggtgcaggcactggtcttagagaaatcctcaag
ttccatggtgctggaggtggcaagcttgtgggaagcactaccgagcagatgttgcagcag
catgaggagtggatacaagaccttgtaatccgtttgctatgtgtctttgctctggaccgt
tttggagattttgtatcagatgaggtggtggcacctgtccgggagacatgtgctcagact
cttggtgtggcccttcgctacatgaacgagactggcgtgtctatgacagttgacgtccta
ctaaagttgctcaaagaagaccagtgggaggtccgtcatgctggcctgctaggaatcaaa
tatgctcttgctgtccggcaggacctgatctctgttttactcccacgcatgctccctgcc
atcactgttggtcttcaggaccttgatgatgatgtcagggcagtagctgctgcagcactc
atccctgtcgtggaaggcttggtacagctactacccaataaggtaccattcatcgtaaac
acattgtgggatgcacttttggatctggacgacctcactgcttccaccaacagcatcatg
acgttgttatcgtctttgctcacctacccgcaggttcgacagtgcagtatgcagcagtca
ttaacagtgctggttccccgggtttggcccttcttgagacatactatatcatccgttaga
cgggcagcgctggaaacacttttcacgctgctctctaaatctgaccagaaatgtgcaatg
tggattaaccctattgtacaggatatgcttcgtcacatcttccagtcttgcatactcgaa
agcaatgaggaaattctagaactgattcaaaaggtgtggacggagctactctctcaggcc
ccgcagcagtatgtggtagcagcaagctgtcaatggatgggggcttggctttgtctcatg
atgcaggcctcacacattcccatagacctcaacatgttgcttgaagtgaagggccgctca
aaggataaaggtggttcaaaggcacgtcaagggaccaaccaggtaaaagaaacggtccag
gaatatatagcaggggcagagacagtgactgatgacccagtatcaagggactatgtggtg
atccgtgctcgccttatggctgctaaattacttggagctctgtgtaggtgtatctgtgac
cctaacctcaatgctgcatctcaggagatccgtccagctgagtctctgggccagttgttg
ctctttcacctcaatacaaagtcagcactgcagcgaatagcagtagctcttgtactctct
gagtgggctgctctgcaaaaggattgcccgatggtgtcaagcactgtgcagcctcgtctt
ctcgccattctttcagagcaattgtattacgatgagattgccatccccttcacacgcatg
cagaatgaatgcaagcagctcatcgccttgctttctgaggctcacatagacattcaagac
cggctcaattgtagtgttttcactattgatcaagccaatgagctgttaaccaccatcttc
acagaatcaacagcaggtgtgaatgtgaagacaaaaccttggcaagtactgcagagtaaa
cggcagcaggcgcaagccacagtaatagaaacgagccatgaatggcagcaattgcatctc
cgggtccacatgttcactgcctgtgcagtgatcaacctccaagtcttccctgacaaactc
aacccactggtccgacctctgatggagtccatcaagcgggaggagaacacgctcattcag
ggttacgccgcttctttcatagccaagctgctgcagcagtgttgtggacgcacaccatgt
cccaaccccaagattatcaaaaacctctgcgcctcagtctgcgcagactcctcagttaca
ccgtcgtctgcttgtcctgtacccccttcacaggaaaattctaaaggtagtggtttggac
aaagactgcctgcatcatacggttaacaaaaccagaggcatcatgactctttaccgtcac
caaagggcagcctttgcaatcaccagcaaaaggggccctgttcctaaatcatccaaggct
cccccttctgacctccctccagggagcaccattggcattgacaatgatgagaggaagcca
tgtctcattcaaaggcgaggagcagagtacactttaacaactattgcaaggcactttggt
gttaacctcactaagtctctgccatacctgtgggagaacacagtggggcctttgagaacc
gcagttaacgaaaatcatgttatggatagacaaattcaattggagagaggtgatgctgca
gctcaggaactggtaaattcgttacaagtccttgaagtcatgactggagccatgtcctgt
gagctcaaacctctgctgctcgaacaccttcctcatctgtttacctgcctccagcatcct
tacacagcagtgcgtcatatggcagcccggtgtgtgggtgtactgagtaagatatccatg
ctggagacaatggatgtttttcttgagtgtgtactaccctggttagctgctattgatgac
tgcacaaaacaggagggagccgttgaagcgttggcctgtgtcatggaacagttggatgtg
gatattgtgccctacattgtactgctggtcgtaccggtattaggccgtatgagcgatccc
agtgacagcattcgtttcatggccacacagtgctttgctacacttattcgcctcttgccg
ctggaggcaggtataccagaccctcctgctatgtctgctgacctggtccgtcagaaggcc
agagagcgtcacttcttggagcaactgcttgatagcagaaagctggagaattacaacatc
cctgtgccaataaaggcagagctaaggaagtaccagcaggacggtgtgaactggctgtcc
ttcctcaacaagtacaagctacatgggatcttgtgtgatgacatgggccttggcaagact
ctgcagtcgatctgcattctagcaggggatcactacctcagggctcaggaatatgccaag
acaaaagcggcagactgcagcccgttgccctctctagtggtgtgcccgcccactctgact
ggtcactgggtggacgaagtgggcaagttctgcgctaaagactaccttaatccactgcac
tacacagggccgccgacagagcgaatccggttacaacaccaagtgaagaaacataatctt
gttgttgcgtcctatgatgttgtgcgtaatgatattgacttctttaaaaatataaaattc
aattactgcattcttgatgaaggtcatatcatcaaaaatggcaaaaccaagctttccaaa
gccattaaacaattggctgccaactttcgtgtcatcttgtcaggaacgccaattcagaat
aacgttcttgagctttggtccctctttgacttcctgatgccgggcttcctagggactgag
cgccagtttgctgcgcgttacggcaaaccaatccttgccagtcgtgacgccaaaagttcc
tcgcgtgaacaggaggctggggtcctggccatggaagcacttcatcggcaagtgttacct
ttccttttgagaaggatgaaagaggatgtactgcaagaccttcctccaaaaataattcag
gattactactgcaacctgagtcctttgcagattcagctctatgaagactttgccaagtct
cgtgcgaaggcaagcatagacgacagcatctctgttgcctctgcagagcaggaggaaaag
cccaggctgaaggccaccggtcatgttttccaggcactgcagtatctgcggaagctgtgc
aaccacccaagtttggtgttgaccccccagcatcctgaatataaacgcatcactgatcag
ctgtcaggtcaaaactccaacctgcgagacattcagcacgctccgaaactctctgcacta
aaacagttgctcctcgactgcggacttggtggcggaggttctgaagggaccaccgaggct
gtggtggctcagcatcgggtgctcgttttctgccagctgaagagtatgctggatattgtt
gaacatgacctcctgaaacccaaaatgcccacagtcacatatttgagactggatggtagc
gtccaggccggcctgcgtcactccatcgtctcccgatttaacaatgacccgtccattgat
ttgctattgctgaccacacatgttggtggtcttggtctcaacctaactggtgctgataca
gtggtgtttgtggaacatgactggaaccccatgagggacttacaggccatggaccgcgcg
catagaattggccagaaacgtgttgtgaacgtgtacaggctcatcactcgaggcacccta
gaggagaagattatgggcctgcaaaagttcaagatgaatatcgccaacaccatcatcagt
caggagaatgctagcctgcagagcatggggacagaccagctcctcaacctcttcactctt
gataaagatgagagaggtgaaagaggtgaacagtctacgtcgacttcaagaaaagcctcc
atgaaatcagtgctggatggcctgggagagctctgggaccagcaacagtatgacagcgag
tacaatctggacagcttcatgcactccctgcattag
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integrated database retrieval system
