Syngnathoides biaculeatus (alligator pipefish): 133509508
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Entry
133509508 CDS
T09681
Symbol
arid5b
Name
(RefSeq) AT-rich interactive domain-containing protein 5B
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133509508 (arid5b)
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Helix-turn-helix
ARID
133509508 (arid5b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ARID
BAH
Ureide_permease
GEMI5_RBS
Motif
Other DBs
NCBI-GeneID:
133509508
NCBI-ProteinID:
XP_061692561
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All DBs
Position
12:9625890..9755453
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AA seq
1121 aa
AA seq
DB search
MEPNSLKWVGSSCGLHGPYIFYKAFKFASRAAETRILSLGDFFLVRCKPDEPVCVAELQL
LWEERTSRQLLSSSKLYFLPEDTPQGRGVSHGEHEVIAVSEKVIVRLQDLVKWTVPDFSG
WTHGLKAEPLKASVLRELGTNGRREALHRYRESTLTSGLNFKDVQRERAHLGQEEDGRKV
LVLSYPQYCRYRSVLVRLREQPTSLLLNHTVLALGGIAALGGNTRILYCRDTFEHPTLLR
NESICDEFAPNLKGRPRKKKLSISQRRDSTGSTAMTAQDLNSLETKSPKVKTGCRALANG
KLSSVPKHRKAAAPEEKERLKEMVEERSEKEKEEARDSSSVASLEKEEDEEAASSSEESR
EDEQAFLVELYKYMKKRDTPIERIPFLGFKQINLWTMFQAAQKLGGYELITVRRQWKHVY
DELGGNPSSTSAATCTRRHYERLLLPYERHLKGEQDKPLPLTKPRSQEKAPSAKAKGVGA
KKAKGPSAAKQTSRKERGEAAKGQQQSQDSTAKGEVATNLEPPPADEPIVIEEELHVTLK
KEESLSGEPPVSLCPKEAESGRAPLAPRPVHAAAQSDWRQIGDPLQVPKTEVHLVTKSAY
LPHHWDQSKPAGHVALPESSIRGKDSSESHGGRVGKVLPMCKQDRQSVDLRPDSVPEKED
YGVIRKESPAQMAAYCKAGQGVMSPLAKKKLLSQVCESTSFSFMSSLQPPLPPERDTDKR
KSEEDGQRQHISDNVPEAAPMFRPSVIQHAQSSKPPPERSGNHLLQPHVSAPWQPYLPRT
QDRDVVENASEKLLQARSFAGDCYSSPHLHSLYRQTENCLSQDRMPGYPNGERREHFARD
REGGQGFVCGGLEQEGLAYRSHYSDEAQTRGESREAEDEPRDFTMSKPLAQRVSSFSKPS
FCGLPYSIVHQGLDSHPKACRVSPMTTSPPKQDPSPPFASPKSSSDSSLTSPVRPSKRSL
GEPEAEEVPERKVRVVTPIHPATAIRRGDPEELKPAEPAHAVHLNNRLPEGHPATAYPLP
HAAPLYAGMYPPGSLVSQDGLQQHPSLQYLKSQSAVSPLVPPLAFHSMMLHRQLLASAPS
PHHFFRHPGGAALYGDLLHHLYPLSTLPPPQLSSVHPSTRL
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaactcactcaagtgggtgggctcgtcttgcggcttacacggaccctatata
ttttacaaagccttcaaattcgcgagccgggccgccgagactcggatcctgtcgctgggg
gactttttcttggtgcgctgcaagccggacgagcccgtgtgcgtcgccgagctgcagctt
ctctgggaggagaggacgagcaggcaacttttgtccagctccaaactttatttcctaccc
gaggacaccccccagggacgcggcgtctcccacggagagcacgaggtgatcgccgtgtcc
gaaaaggtgatcgttcgcctccaggacctggtcaagtggactgtgcccgacttctcggga
tggacccacggtctgaaggcagagcccctcaaggcctcggtgctgcgtgagctgggcacc
aacgggcggcgtgaggccctccaccgctaccgcgagagcactctcaccagtggtctcaac
tttaaggacgtccagcgggagcgggcgcaccttggccaggaagaggacggcaggaaggtg
ctggtcctcagctacccgcagtactgccgctaccgttcggttctggttcggcttagggag
cagcccacctcgctgctgctcaaccatacggtgctggcgctgggtggcatcgcggcgctg
ggcggtaacacccggatcctgtactgccgcgacacctttgagcatcccacgctacttcgg
aacgagagcatttgtgacgagttcgctcccaacttgaaggggcggcctcgcaaaaagaag
ctgtccatctctcagaggagggactccacaggctccacggcgatgacagctcaggacctc
aacagcttggagaccaaaagtcccaaggtcaaaacgggctgcagagcgttagccaacggc
aagctgagctccgttcccaaacacaggaaggcggcggcgcccgaagagaaggaacgactg
aaggagatggtggaggagaggagcgagaaggagaaggaagaggccagggactcctcctcc
gtggcctccctggagaaagaggaggacgaggaggcggcgtcctcgtccgaggagagtcga
gaagacgagcaagccttcctggtggagctctacaagtacatgaagaagagggacaccccc
attgagaggatccccttcctgggcttcaaacagatcaacctttggaccatgtttcaagct
gctcagaagctgggaggatatgagctgatcacagtccgcaggcaatggaagcatgtgtac
gatgaactgggtggcaacccgagcagcaccagcgccgccacgtgcactcgcaggcactac
gagaggcttctcctcccgtacgagaggcacctcaaaggtgagcaggacaagcccctcccc
ctcaccaaaccccgcagccaggagaaggcaccgtcggccaaggccaaaggcgtcggggcc
aagaaagccaagggcccgagcgccgccaagcagacgtccagaaaggagcgcggggaggcg
gccaagggccagcaacaatcacaggattccacggcgaaaggggaagtggccacgaacctc
gaaccgccacctgcggatgaacccatcgtcatcgaggaggagcttcacgtcacgctgaag
aaagaggagtcgttgagcggggagccgcccgtgtcgctgtgcccaaaggaggccgaatcc
ggcagggccccgctcgcccctcggcccgtccacgcagccgctcagtccgactggaggcag
atcggcgacccccttcaagtccccaagaccgaagtacacctagtcaccaaaagcgcctac
ctgcctcatcactgggaccagagcaaacccgccggacacgtcgcactgcccgagtcctcc
atccggggcaaagactcctcggagagtcacggcgggagagtgggcaaggtgctgccaatg
tgtaaacaggatcggcagtccgtagacttgaggccagattccgtacccgaaaaggaggac
tatggggtaattaggaaggaaagtcctgcacaaatggccgcctactgcaaagcgggccaa
ggcgtcatgtctcctctagccaaaaagaaactcctctcccaagtgtgtgagtcaacatcc
ttctcattcatgtcgtctctccaacctcctctcccccccgagagagacacggacaagagg
aaaagcgaggaggacggccagaggcagcacatatccgacaacgtcccagaggcggcgccg
atgttccgtccgtcggtcattcagcacgcgcagagcagcaagcctccgccggagaggagc
ggcaaccacctcctgcagcctcacgtcagcgccccgtggcagccgtacctccccaggacg
caggaccgggacgtcgtggagaacgcgtcggaaaaactgctccaggcccggagcttcgcc
ggggactgctactcgtccccgcacctgcacagtctgtacaggcagacggagaactgcctg
agccaggaccggatgcccggataccccaacggagagcggcgggagcacttcgccagggat
cgggagggggggcagggtttcgtttgcggaggcctggagcaagaaggcctcgcgtacaga
tcgcactacagcgacgaagcgcagactcgaggggagagcagagaagcggaggacgaaccc
agagacttcaccatgtccaaaccgcttgcccagcgggtgtcgagcttctccaaaccctcc
ttctgcggcctcccttactccatcgtgcaccagggcttggactcccaccctaaggcttgt
agagtatcccccatgaccacctcgcctcccaagcaggacccgtctccaccctttgccagt
cccaaatcttcgtctgactcctccctcaccagtcccgtgcgacccagtaaacggagcctc
ggggaaccggaggccgaggaggtgccggagaggaaggttcgcgtggtgacgccgatccac
ccggccaccgccatccgacgcggcgacccggaggagctgaaacccgccgagccggcccac
gccgtccacctcaacaaccgcctccccgagggccacccggccaccgcctaccccctccct
catgccgcacccctctacgccggcatgtacccgcccggcagcctggtgtcgcaagacgga
ctccagcaacacccgagcctgcagtacttaaaaagtcagtccgccgtgtcccccctcgtc
ccccccttagccttccactccatgatgcttcacaggcagctcctggcctctgcccccagc
ccccaccacttcttcaggcacccgggcggggcggcgctatacggggacctgctgcatcac
ctgtacccgctttccaccctccccccgccacagctgtcctcagtgcaccccagcactaga
ctgtga
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