Syngnathoides biaculeatus (alligator pipefish): 133509558
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Entry
133509558 CDS
T09681
Symbol
spast
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133509558 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbia04812
]
133509558 (spast)
Enzymes [BR:
sbia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
133509558 (spast)
Membrane trafficking [BR:
sbia04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
133509558 (spast)
Cytoskeleton proteins [BR:
sbia04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
133509558 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
AAA_lid_3
AAA_22
RuvB_N
AAA_5
AAA_16
TIP49
MIT
AAA_2
Mg_chelatase
AAA_14
IstB_IS21
NPHP3_N
nSTAND3
DUF815
DUF5906
AAA_24
Gag_p24_C
Motif
Other DBs
NCBI-GeneID:
133509558
NCBI-ProteinID:
XP_061692675
LinkDB
All DBs
Position
12:complement(19975721..19982359)
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AA seq
471 aa
AA seq
DB search
MSAKTNTSKCKDSGEVVKNYHKQAFEYISKALRIDEDDTGEKEEALQWYKRGIVELESGI
AVTITGQGEQYERAKRLQEKMITNLTMAKDRLALIEATLASKGRGQAQNTKNNAQRQTKP
PPKSEPKVRGTPKNIRPSSAGRPPYRTADSKVTPQMVRPSKQPYKRELKNFKNVDSKLAN
MILNEIVDTGVSVTFNDIAGQDLAKQALQEIVILPALRPELFTGLRAPARGLLLFGPPGN
GKTMLAKAVAAESNGTFFNMSAASLTSKFVGESEKLVRALFAAARELQPSVIFIDEVDSL
LSERREGEQEFSRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDEAVLRRFAKRVYV
TLPDEKTRSTLLQHLLAKHGSPLCKNELSCLAKVTAGYSGSDLTSLAKDAALGPIRELGP
EQVRHMAASQMRNIKMKDFEDSLKRIKPSVSPATLNMYNQWNKDFGDTTTF
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaaaaacgaacaccagcaaatgtaaagatagcggcgaagtagttaaaaactac
cacaagcaagcgtttgagtatatatccaaagcactacggattgacgaagatgatacagga
gagaaggaagaggctctgcagtggtacaagagggggattgttgaactggaaagcggcatc
gctgtgacgatcacaggacaaggagagcagtatgagcgggctaagaggcttcaggagaaa
atgatcaccaaccttaccatggctaaagacagacttgctcttatagaggccacattggct
tctaaaggcagaggtcaagcccaaaataccaagaataacgctcagcgacaaacaaaacct
cctcccaaaagtgagcctaaggtccgagggacgcccaaaaatatcagaccctcctcagca
ggaagaccaccttatagaactgctgattcaaaggtaaccccacagatggttaggccttca
aaacagccttacaagagggagctgaaaaatttcaagaatgtggacagcaaactggcaaac
atgatcctgaatgaaattgtagacacaggggtgtctgtaacatttaatgatatcgctggc
caggatctggccaaacaagcactccaggagattgttattcttcctgccttgagaccggag
ctcttcactggcttgagagctccggcacgaggtttgctcttatttggcccacctggaaat
gggaaaaccatgttggctaaagcagtggcagcagagtcaaacggcacattcttcaacatg
agtgcagccagcttgacatcaaaatttgttggagagagtgagaagcttgtccgggcgttg
tttgcagctgcccgcgaattacaaccgtctgtcatttttattgatgaagttgacagcttg
ctctctgaaaggcgggagggcgaacaggagttctcccgtcgtttaaaaactgagttcctc
attgaatttgatggggtgcagtctggaggagatgacagggtacttgtcatgggagccaca
aacagacctcaggagctagatgaagcagttttaaggcgctttgcaaaaagggtctacgtg
accttacctgatgagaagacaaggtccacccttctgcagcatcttttagcgaaacacggg
agtccactgtgcaagaatgagttgagctgtcttgcaaaagtaactgctggatattctgga
agtgatctgacatccttggcaaaagatgccgcacttgggccaattagagaattgggacca
gagcaagtccggcacatggctgccagtcagatgcgcaacatcaagatgaaagactttgag
gattccctgaagcggatcaagcccagcgttagcccagcaaccctcaatatgtacaaccaa
tggaacaaagactttggtgacacaactacattttga
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