Syngnathoides biaculeatus (alligator pipefish): 133509576
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Entry
133509576 CDS
T09681
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133509576 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
133509576 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
133509576 (pdlim1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
CASP_C
Motif
Other DBs
NCBI-GeneID:
133509576
NCBI-ProteinID:
XP_061692715
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All DBs
Position
12:17477464..17484589
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AA seq
321 aa
AA seq
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MPLRVVVQGPGPWGFRLVGGKDFEQPLTISRVTPGSKAAEANLCIGDVILAIDGEATDKM
THLEAQNKIKGCIQEMALSIDRSENKLWSPLTSEEGKSHPYKMNLASEPREMKQIGSAHN
RSALPFSSFGSKVVTNQYNNPAGLYSSENIKNFNSAVDEVKTLKTTNEADNVAAEPTKST
KRPPIAADSEVYKMLQENQESDEPPRQSASFKVLQEILETGNSDRPSGFRSVKAPTTKIG
SSVGNPEKLPICDKCGSGIVGMVVKLRDKFRHPECYTCTDCDVNLKQKGHFFVEEQIYCE
KHARERMTPPEGYDVVTVFPK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgggtagttgtgcaaggtcctgggccctgggggttcaggctggttggagga
aaagacttcgagcagccgctgactatttctcgggtgactcctggaagcaaagcagccgag
gccaacctctgtattggtgacgtgatcttggctattgatggtgaagccacagacaaaatg
actcacttggaagcacagaacaaaattaaggggtgcatacaggagatggcactttccata
gacagatcagagaataagttgtggtcgccactcacatcagaagaaggaaaatcgcatccc
tacaagatgaatcttgcatcagagccacgggaaatgaaacaaataggctccgcccacaac
aggagtgctctgccattctccagttttggttccaaggttgtgaccaaccagtacaacaac
ccagctggcctctactcctcagagaatatcaagaacttcaactcggctgtggacgaagtc
aaaactttgaaaaccaccaacgaggctgacaatgtagctgcagagccaacaaagtccacc
aagcggccgcctatagcagcagattcagaggtttacaaaatgctgcaagagaaccaggag
tctgatgagccccctcgacagtcagcttccttcaaagtgcttcaggagattctcgagact
ggaaattctgacagaccatcagggttcaggagtgtgaaagcaccgacaacaaagattggc
tcctccgttggaaatcctgagaagctgcctatctgtgataaatgtggatcagggattgtg
gggatggtggtgaagctacgtgacaagttccgacaccctgagtgctacacctgcacagac
tgcgacgtcaacctgaaacagaagggacatttctttgtggaagagcagatttactgcgag
aagcacgctcgcgagcgaatgaccccgcccgagggctatgacgtggtcacggtcttcccc
aagtag
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