Syngnathoides biaculeatus (alligator pipefish): 133509580
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Entry
133509580 CDS
T09681
Symbol
valopa
Name
(RefSeq) vertebrate ancient long opsin a
KO
K04256
c-opsin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbia01009
]
133509580 (valopa)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sbia04030
]
133509580 (valopa)
Protein phosphatases and associated proteins [BR:
sbia01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133509580 (valopa)
G protein-coupled receptors [BR:
sbia04030
]
Rhodopsin family
Vision
Opsin
133509580 (valopa)
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
7TM_GPCR_Srsx
7tm_4
Motif
Other DBs
NCBI-GeneID:
133509580
NCBI-ProteinID:
XP_061692724
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All DBs
Position
12:22456486..22480820
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AA seq
387 aa
AA seq
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MEALSLSVNAVSYTVAAELNPIDDPFTGPIQNIAPWNFTILALLMFVVTSLSLSENFLVM
FATYKFKQLRQPLNYIIVNLAIADFLVSLTGGLISFLTNARGYFFLGRWACVVEGFAVTF
FGIVALWSLAVLSFERFFVICRPLGNIRLQAKHAIMGLLFVWIFSFVWTFPPVLGWNRYT
VSKIGTTCEPDWYSSDVTDHSYIITFFSTCFILPLGLIFFCYGKLLKKLRKVSHGRLATA
RKPERQVTCMVVVMIIAFMVAWTPYAVFAILVTIHPTIELDARLASIPAFFSKTAAVYNP
IIYVFMNRQFRKCIIQLFTGIVAMPESNMNQTSERPGTTADSQTGEMAAIAARIPIGGTG
SPRSEDSQTDCGSFAQLPIPENKVCPI
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggaggctttaagtttgtccgtgaacgcggtgtcctacactgtggcggctgagctgaac
ccgatcgatgacccgttcactggacccatccagaacatcgcgccgtggaacttcaccatt
ttggcgctgctcatgtttgtggtcacctctctttctctgagcgaaaactttctcgtcatg
tttgccacatacaagttcaaacaactcagacagccactgaactacatcatagtgaatttg
gccatagctgactttctagtctccctcacaggaggactcataagtttcctgactaatgcc
agagggtatttcttcctgggccgttgggcttgtgtggtggagggctttgctgtgactttt
ttcggaattgtagccctgtggtctctggcggttctgtcctttgaacgattctttgtgatc
tgccgacctctgggtaacattcgactgcaagccaaacacgccatcatgggtctgctcttc
gtctggattttttcctttgtttggaccttccctccagtgctaggctggaacagatacact
gtcagcaagattggaactacctgtgagcctgactggtattcatccgatgtcactgaccac
agctacatcatcactttcttctccacttgtttcattctgcctcttggacttatcttcttc
tgctatggaaagctcctgaagaagctccggaaggtgtcccatggtcgtctggccactgcc
aggaaacctgagcgtcaggtgacctgtatggtggtcgtcatgattattgcattcatggtg
gcatggacaccatatgcagtctttgctatactagttacgattcatccaactattgaactg
gatgccaggttggcctctatccctgcctttttctccaagacagctgcggtgtacaaccca
atcatctacgtatttatgaacagacagttcaggaagtgcatcatccagctcttcactggg
attgtggcgatgccggaaagcaacatgaaccagacatcagagcgaccaggaaccaccgca
gacagtcaaacaggagaaatggctgccattgcggcccgtatccccattggtggtacagga
tcacccaggtctgaagattctcagactgactgtggctcctttgctcaactccccattcca
gagaacaaagtttgtccgatctaa
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