Syngnathoides biaculeatus (alligator pipefish): 133509591
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Entry
133509591 CDS
T09681
Symbol
thbs2a
Name
(RefSeq) thrombospondin-2 isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04145
Phagosome
sbia04510
Focal adhesion
sbia04512
ECM-receptor interaction
sbia04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133509591 (thbs2a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133509591 (thbs2a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
133509591 (thbs2a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133509591 (thbs2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133509591 (thbs2a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbia04147
]
133509591 (thbs2a)
00536 Glycosaminoglycan binding proteins [BR:
sbia00536
]
133509591 (thbs2a)
Membrane trafficking [BR:
sbia04131
]
Endocytosis
Phagocytosis
Opsonins
133509591 (thbs2a)
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133509591 (thbs2a)
Exosomal proteins of colorectal cancer cells
133509591 (thbs2a)
Exosomal proteins of bladder cancer cells
133509591 (thbs2a)
Glycosaminoglycan binding proteins [BR:
sbia00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133509591 (thbs2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_ADAMTS
TSP1_CFP_C
EGF_3
cEGF
Laminin_G_3
TSP1_CCN
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
133509591
NCBI-ProteinID:
XP_061692747
LinkDB
All DBs
Position
12:complement(14814658..14832249)
Genome browser
AA seq
1182 aa
AA seq
DB search
MILRYLLPITFLFLHTLAQDGEQDDETSFDLFEVSHISRKTLGAKQFRGQNSDAPAYRFI
RFDHLPPVSPVVLEKIVRRIQNNEGFVFVASIRQDRSSRGTLLGFEGSDGRRQFEIVSNG
RANSLDLVYWLEGAQNIVSFEDVDVSDSQWKNLTLHVHGENANLYVGCNLVDSVILDEPF
YEHLQAEGSRMYVAKGSIRENHFRGLLQNVHLIFDTTIEDILLSRDCEVSKQDDANIVSE
STEIVDVSPSITTNIIGQKRDDTGADMCDRSCEELSTMFQELKGLRVVVSNLIDGLQKVT
QENTIMKEALGKMKNTKEKNMCWQDGRLFDDKEDWVVDSCTKCTCQESKVVCHQITCPAV
ACASPTFVDGECCPVCLPKDSEHGWSPWSEWTECTVTCGPGTQQRGRSCDATSNPCTGPS
IQTRKCSPRRCDSRVRQDGGWSLWSPWSSCSVTCGDGQITRIRHCNAPMPQLGGRDCEGN
GRETQRCTAEPCPIDGGWGPWSPWATCSATCGGGIKTRKRECNSPHPQYGGRKCIGEVND
SDSCNKKECPVDGCLSNPCFGGVDCSSAPDGSWECGPCPAGFRGNGTHCEDINECEMVPD
ICFNVGGLQRCINTDPGFHCLPCPKRYKGTQPFGMGVDAAKKIKQVCEPENPCKDKTHNC
HRSAECIYLSHFSDPMYKCECRTGYAGDGYICGEDSDLDGWPNHNLVCGANATYHCKKDN
CPSLPNSGQEDFDKDGQGDACDKDDDNDGILDERDNCALLYNPRQSDFDKDEVGDRCDNC
PYEHNPNQIDTDHNGEGDACAIDIDGDEILNENDNCPLVYNTDQKDTDMDGVGDQCDNCP
LLHNPLQMDLDNDLVGDQCDNNQDIDEDGHQNNLDNCPYVANANQADHDKDGKGDACDFD
DDNDGVPDDRDNCRLTPNADQLDSDGDGRGDACKDDFDNDSIPDILDVCPENSAISITDF
RKFQMVHLDPKGTTQIDPNWVVRHQGKELVQTANSDPGIAVGFDEFSAVDFSGTMYVNTD
RDDDYAGFVFGYQSSARFYVVMWKQITQTYWEDKPSKAFGISGVSLKVVNSTTGTGEHLR
NALWHTGNTPGEVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGKQIMADSGP
IYDKTFAGGRLGLFVFSQELVFFSDLKYECRDELELPTRLIR
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgatactcaggtacttgctaccaataacgttcctcttcctccacacgctcgcccaagat
ggcgagcaggacgacgaaacctccttcgacttgtttgaggtgagtcacatcagccgcaag
acactgggggccaaacagttccggggccagaactcggacgcccccgcctatcgcttcatc
cgattcgaccacctgcccccggtgagccccgtcgtcctggagaaaatcgtgcgccggatc
caaaacaacgagggcttcgtgttcgtggccagcatccgtcaagaccgcagctcacgtggg
accctgctgggcttcgagggttccgacggccggcgtcagtttgagatcgtgtccaacgga
cgcgctaactccctggacctggtctactggctggaaggtgcccagaacatcgtttcgttc
gaggacgtggacgtgtccgactcccagtggaagaacttaacgctgcatgtccacggggag
aacgccaacctgtacgttggctgcaacctggtggacagcgtcatcctggacgagccattc
tacgagcacctgcaggccgaaggcagccgcatgtatgtggccaaaggatccatccgggag
aaccacttcaggggtcttctgcaaaatgtgcatttgatatttgacaccacaatcgaggac
atcctgctaagtcgagattgtgaagtttccaaacaagatgatgccaatattgtcagcgag
agcactgagatcgtggatgtgagtccttccataaccaccaacatcattggccagaagaga
gatgacactggcgcagacatgtgcgaccgctcctgcgaggagctcagcactatgttccaa
gagctcaaaggtctccgagtggtcgtcagtaacctcattgatggcttgcaaaaagtgacg
caggagaacaccatcatgaaagaggcccttggaaagatgaagaacactaaggagaagaac
atgtgttggcaagatggccgactattcgatgacaaggaagactgggttgtagacagctgc
accaaatgtacctgccaggagtccaaggtagtgtgtcaccaaattacctgccccgcagtg
gcctgtgccagccctacatttgttgatggcgagtgttgtcctgtgtgtctgcctaaagac
agtgagcatggctggtccccgtggtcggagtggacagagtgcacagtcacttgtgggcca
ggaactcagcagaggggaaggtcatgtgatgcaaccagtaacccctgcacaggaccttca
attcagactcgcaagtgcagcccaagaagatgtgacagtcgcgttcgccaggatggaggg
tggagcttgtggtcgccgtggtcgtcctgctcagtgacctgcggagatggccagatcacc
aggatacgacactgtaatgcccccatgcctcagctaggggggagagactgtgaaggaaac
gggcgggagactcagcgctgcactgcagagccttgtccaattgatggaggttggggacct
tggtctccgtgggcaacctgctccgcaacatgcggtggtgggatcaaaactaggaaacgc
gaatgcaacagccctcatcctcagtacggcggccggaagtgtatcggagaggtcaacgac
agtgacagctgtaacaaaaaggaatgtcctgttgatggctgtctgtctaatccgtgcttt
gggggagtggactgcagcagtgctcctgatggctcctgggagtgcgggccgtgccccgct
ggtttccgtggaaatggtacccattgtgaagatatcaatgagtgtgaaatggtgcctgac
atttgcttcaatgtgggtggactgcagcgctgtatcaacaccgatccaggcttccactgt
ctcccctgcccgaaacgctacaaaggcacccaacctttcgggatgggggtggatgctgct
aagaagatcaagcaggtgtgcgagccagagaatccctgcaaggacaagacacacaactgt
cacagatcggctgaatgtatctaccttagccatttcagtgatcccatgtataagtgtgag
tgtcgcactggttatgctggtgatggctatatatgcggtgaggactctgacctcgatggc
tggcccaatcacaaccttgtgtgtggtgccaatgccacctaccattgtaagaaggacaac
tgccccagcttgcccaactctggacaagaagactttgacaaagatggtcaaggagacgct
tgtgataaggatgatgacaatgatggaatcttggatgagagggacaattgcgccctcctt
tacaaccctcgtcagtctgactttgacaaggatgaagtaggtgaccgctgtgataactgt
ccttatgagcacaatcctaaccagattgacacggaccacaatggggaaggggatgcctgt
gctatagacattgatggagatgaaatcctgaatgagaatgacaactgccctcttgtatac
aatactgaccagaaggacacagacatggatggagttggtgaccagtgtgataattgtccc
ctgctgcacaatcctctgcagatggacttggacaacgacttggtgggagatcagtgtgac
aacaaccaggatattgacgaagacggccatcagaacaatctagacaactgtccatacgtg
gcaaatgccaaccaggccgaccacgacaaagacggcaaaggagacgcatgtgactttgat
gatgataacgacggtgtacctgatgacagggacaattgcagactgacccccaatgcagac
cagctggactctgacggtgatggaagaggtgatgcttgcaaagatgactttgacaatgac
agtatcccagatatcctcgacgtgtgtccagagaacagtgctattagcatcacagacttc
aggaagttccagatggtccacttggacccaaagggaaccactcaaatcgaccccaactgg
gtggtgaggcaccaaggcaaagagcttgtgcagactgccaactctgacccaggcatcgcc
gtaggcttcgatgagttcagtgctgtggacttcagtggcacgatgtatgtgaacacagac
agggatgacgactatgcaggcttcgtttttggctaccagtcgagtgcgcgcttttatgtg
gtgatgtggaagcagatcacacaaacttactgggaggacaagccctccaaggcctttggt
atctctggtgtgtccctcaaagtggtcaactcgaccaccggcactggagaacacctcagg
aatgctttgtggcacacgggcaacacccccggagaggtacgcactctgtggcatgacccc
aaaaatattggctggaaagattacacagcttacaggtggcacctcatccatagaccgaaa
actggtttcatcagagttgttgtatacgagggcaaacagatcatggctgactcaggacca
atttatgacaagacatttgctggtggaaggttaggattgtttgttttctcgcaagagctc
gtcttcttctccgacctcaagtatgagtgcagagatgagctggagttgccgacaaggttg
ataagataa
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