Syngnathoides biaculeatus (alligator pipefish): 133509649
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Entry
133509649 CDS
T09681
Symbol
gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133509649 (gtf3c3)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
133509649 (gtf3c3)
TFIIIC, fungi type
133509649 (gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_16
TPR_8
TPR_6
TPR_CcmH_CycH
TPR_17
TPR_9
TPR_11
TPR_12
ANAPC3
ARM_TT21_5th
ChAPs
SHNi-TPR
HAT_Syf1_CNRKL1_C
Nitr_red_assoc
TPR_Slam
BTAD
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
133509649
NCBI-ProteinID:
XP_061692873
LinkDB
All DBs
Position
2:16194445..16209884
Genome browser
AA seq
934 aa
AA seq
DB search
MSGFSAELIDYLEGRITFEEFDRRRDERKAKEAEASVKTEEASQPCTSTTNLVKNEEGVS
PGVQQVFASMLGESTDQILSDDDNDSLGYIDDKNDEDFAVEEDVEEEDDDKEEDLKLKVK
DKKPKKRRRRYESEGKESEDMTVGDVLALEMELNRENKKMMKERRSRSKLPRALRGLMGE
ANIRYARGEKDDAIAMCMEIIRQAPLAYDPFSTLAMIYEDEGKMEKSLQFSLIAAHLNPS
DCEEWIRLAEISLEQDNVRQALVCYNKAVKYAPTNVRYLWDRCSLLMRLGEHKQCMDGYR
RILSLLPMDEAEHFMQLSKDMAKSYYESGDLPSALSVIEEALARHPDLVSDDIINMAAEL
HITNHQYEKALQVLVHFVGVVLVQDETHSDSAVNDPKLSEITSENEGKNEGEKSRTPAEM
APAGKSEIKDVQVPDNIPVDLKAKLIVCLIHMHISAPLEALVSSLMVQSAEEVGDLFLDV
GEAYLEMGEYLSALPLLSALVISEKYNLAVVWLRHAECLKALGEMKAAAESYTKVVELAP
QHLEARLSLATLQQHLGRPECALKALESMYDNETLAQDSTAAQKELKLLLHRSTLLKTQG
LIQQYLDAMITMMSMLLKVAMQRAKVCVRSVIMSGEKHLRLVKVENMLSDIGDQEAAYFD
ITCKTKVLSKEDWWQLLLSCVLTLCDVQRYGEAELMVDSAMEFYSFYDIKPRRKELEFLG
LSASILDRDHHKAYNYIRLMLMDDVDQPQLWNIFNQLTTSSHHQRHHRFCLRLLLKYPDN
RALCVLCGHNAMVSGSFKHALGQYIQAFQSQPNDALLNLFVGLTFFHMASQKFVAKRHTL
IVQGFAFLQWYVELRGECQESMYNLGRALHQIGLTHLAIHYYHKTLLLPVQKLEGIPDDQ
VDLRREAAFNLSLIYQASGNVEMAHQLINTHCVI
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcttcagtgccgagctcatcgattatctggaggggaggataacatttgaggag
tttgacaggaggagagatgagaggaaagccaaggaggcagaagcgtcagttaaaaccgag
gaggcgtcacagccttgcacctctacaactaacctggttaaaaatgaggaaggagtcagc
cctggagttcagcaagtcttcgcctcaatgctgggcgaatctaccgaccagatattatca
gatgacgacaatgacagtttgggctacattgatgacaagaatgatgaggattttgctgta
gaagaggatgtagaggaagaggatgatgacaaggaggaagacttgaagttgaaagtgaag
gataagaagccgaagaagaggagaagaaggtatgaaagtgaaggcaaggaaagtgaggac
atgacagttggagacgtgctcgcactcgagatggagctaaaccgtgaaaacaagaaaatg
atgaaggaacggcgcagccgcagcaaacttccccgggcactcagaggcttgatgggtgag
gcgaacattcgctacgccagaggagagaaagatgatgccatcgcaatgtgtatggagatc
atacgacaagcgccgctggcctacgatcctttctccacactggcgatgatctacgaggac
gaaggcaaaatggaaaaatctctgcaattcagtctgatcgccgcccacctaaacccctca
gactgtgaggagtggataaggctagctgagatctcactggagcaggacaatgtccggcaa
gctctagtttgctacaacaaagccgtcaagtatgctcccaccaacgtacgctacctgtgg
gaccgctgcagcctcctcatgcgtctgggggagcacaagcagtgcatggatggctaccgg
cgaattctgtctctgctgccaatggatgaggccgaacacttcatgcagctgtccaaggac
atggccaagagttattatgaaagtggtgacctgccctcagcactcagtgtaattgaggag
gctctggcacgacaccccgacctggtcagcgatgacatcatcaacatggccgctgagctc
cacatcactaaccaccaatatgaaaaggctttgcaggtcttggtccattttgtgggtgtg
gttctggtccaggatgaaactcactctgactctgccgtcaatgatccaaaattatcagag
attacaagcgagaatgaagggaagaacgagggtgaaaagtcaaggactccagctgaaatg
gcaccagcgggcaaatctgaaatcaaggatgttcaggttccagacaacattccagtggac
ctcaaggcaaagttgattgtctgccttatccatatgcacatcagtgcacccctggaggcc
ctagtgtcctcactgatggtgcaaagtgcagaggaggttggtgatttattcctggacgtg
ggtgaagcctacctagagatgggagaatacctgtctgctctacctttgctgtctgcactt
gtcatatctgagaaatacaacctggctgtcgtctggctgaggcacgcagagtgcctgaag
gcattgggtgaaatgaaagcagcggccgaaagctacacaaaggtcgtggagttggcaccg
cagcacctggaggcgcgcttgtcacttgccaccttgcagcaacacctcggtcggccagag
tgtgccctcaaagctttggagtccatgtacgacaacgaaacacttgcccaagactcaact
gcagctcaaaaggagctaaagttgctcctgcaccggtccacactgttgaaaacacagggc
ctaatccagcaatacttggatgctatgatcactatgatgtctatgctcctcaaggtggcc
atgcagcgcgccaaggtgtgtgtgcgttctgtcatcatgtcaggagagaaacatctgcgc
ttggtgaaggttgagaacatgttgtcggacatcggggaccaggaagcggcatatttcgac
atcacttgtaaaaccaaagttctttccaaagaggactggtggcagctgctgctgagctgt
gtgctcacactgtgcgacgtgcaacgctacggagaggcagagctaatggtcgattccgcg
atggagttctactccttctatgacatcaagcccaggaggaaggagcttgagttccttggg
ctctcagccagcatcctggaccgtgaccaccacaaggcctacaactacatcagattgatg
ctgatggacgatgtggatcagccccagctttggaatatttttaaccaactgacgacatcc
tcccaccaccaacgtcaccatcgcttctgtctgcgtctgcttttgaaatatcccgacaac
cgtgccctgtgtgtcctctgcggacacaatgccatggtgtcaggcagctttaaacacgcc
ctgggtcaatacattcaagccttccagtctcagcctaatgatgcgctccttaacttgttt
gtaggcctcacctttttccacatggcatcccaaaaatttgtggcaaagaggcacacattg
attgttcagggtttcgccttcctccagtggtatgtggaactgcgtggggagtgtcaggag
agcatgtataatttgggtagagcattgcaccagattggcctaacacatttagccattcat
tactaccacaagacacttctattaccggtacagaaactagagggtatcccggatgaccaa
gtggatctgaggagggaggcggccttcaatctttctctcatctaccaagccagtggcaat
gttgagatggcccaccagctcatcaacacgcactgcgtcatctga
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