Syngnathoides biaculeatus (alligator pipefish): 133509688
Help
Entry
133509688 CDS
T09681
Symbol
papolg
Name
(RefSeq) poly(A) polymerase gamma
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133509688 (papolg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133509688 (papolg)
Enzymes [BR:
sbia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
133509688 (papolg)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
133509688 (papolg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Nrap_D2
GH97_C
Motif
Other DBs
NCBI-GeneID:
133509688
NCBI-ProteinID:
XP_061692951
LinkDB
All DBs
Position
12:16218639..16251753
Genome browser
AA seq
818 aa
AA seq
DB search
MKEMSSNMPGGQQPQKHYGITSAISLAPPRDIDHQYTKKLCDAMKPFGVFEDEEELNHRL
AVLGKLNNFVKEWIAEISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPR
HVERSDFFQSFFEKFKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNL
DLRGDSILRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLG
FLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDP
RVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKFGLSVTDEILQGKAEWPKLF
EPPNFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYINLAHVNPQSFP
GSKENRNENDFVSMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMK
IEATHVKKKQLHQYLPAELVQKKKRSIAELNRSSNGGSSKRISLDSSHLDSSRDTDSGTP
FSSPTSKPSKPTSDTDDGVSPPKQLFVEVSPAPSSTAFTKEVLSIAVVGSTTSSVSTTLS
GNMMPSAASSPNHESENLEDSVNGATKRPQSPVQEDIAKRHKEAEQVAPDTESTFKEPFP
PSSDTPREKTNMTPLSESKPKPIPTIDTPRTQRLPSMELPDASSPLPASNSCRVVKNSIK
LALNRHNITPPKPPVFEATITSEVPPACQERGMFIPVIGSKHVSSKHTTHSVGSSIPTLV
SRGADPLNGAASKRAHSPSLEEQAKRLKETEKARIHIA
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatgtcaagcaacatgcctggagggcagcagcctcagaaacactatggcatc
acatctgccattagcctcgcacctccaagagacatagaccatcagtacacgaagaaactc
tgcgatgctatgaagccttttggagtgtttgaagatgaagaggaattaaatcacagactt
gctgttctgggaaaattgaataactttgtcaaagaatggatcgcagagatcagtgaatta
aagaaccttccgccctcagctatcagctgcgttgggggcaagatatttacgtttggttca
tatcgtcttggagtccacacaaaaggagctgatattgatgccctatgtgtggctcctcgt
catgtagaaaggagtgacttttttcagtctttctttgagaaattcaaacagcatgaagag
atcaaggacctgagggctgtcgaggatgcttttgttcctgttataaaattcaaatttgat
ggaatagagattgacctgctttttgccagactggcattacaatccattccagacaacctt
gacctccggggagattccatcctaagaaatttagacattcgttgcattcgaagtcttaat
ggttgtcgggtgactgatgaaatactatacctagtgccaaacaaagaaaacttcaggctg
accttgagagccattaaactttgggcaaaacgtcgtgggatctactccaacatgctgggc
tttctgggtggagtatcatgggccatgcttgtagcaaggacctgccagctctaccctaat
gctgttgctgcaaccctcgtccacaagttcttcctggttttctccaaatgggagtggcca
aaccctgtgctgttgaaacaaccggaggacagtaatctgaatttacctgtatgggatcct
agggtaaatccatctgatagatatcacctgatgcccatcatcacacctgcctatccccag
caaaactccacgtacaatgtctccacttcaacgcgtaccattatgagtgaagagtttaaa
tttggtctcagcgtcacagatgagatccttcagggaaaagctgaatggccaaagctcttt
gaaccgcccaatttcttccagaaatacaaacattacattgtcctgacagccagtgcgtca
acggaagaaaatcatttagaatggattggacttgttgagtcaaagattcgagttttggtg
gggaacctggagagaaatgagtatattaacctggcacatgtaaatccccagtccttccct
gggtccaaagagaaccggaatgagaatgactttgtgtccatgtggttcatcggtatcatt
ttcaagaaggtggagaatgcggagagcgtgaacattgatcttacatatgacatccagtca
tttaccgacactgtatacagacaagccaataacatcaacatgctgaaggatggcatgaag
atcgaagcgacccatgtgaagaaaaagcagctccatcagtaccttcctgctgagctagta
cagaagaagaagaggagcatagcagagttgaatcgaagctccaatggagggagctcgaag
aggatctctctggatagtagtcacctagacagttcaagagacaccgactcagggactccc
ttcagctcccccaccagcaaaccttccaagcctacatctgacacagatgacggtgtcagc
ccccccaagcagctttttgttgaagtttctcctgcacccagctcaacagcattcactaaa
gaggtcctatccatcgcggttgttggttctaccactagctctgtctcaacaacactaagt
gggaatatgatgcccagtgctgcaagcagccccaaccatgagtcagagaacctcgaggac
tctgtcaatggtgcaaccaagagaccgcagtcacccgtgcaggaagacattgccaagagg
cataaagaggcagagcaggttgcccctgatactgagtctacattcaaggaaccatttcca
ccatcatcagacactccccgagaaaaaacaaatatgactcctctctcagaatcaaagcct
aagccaattcctacgattgatactccaagaacacagaggcttcccagcatggagctgccc
gacgcctcctcaccactgccagctagcaacagctgtcgcgtcgtaaaaaattccatcaaa
cttgcccttaaccgccacaacatcacacctcccaagcccccagtgtttgaggccacaata
acctctgaggtgcctcctgcctgtcaagaaaggggcatgttcattcctgttatcggttcc
aaacatgtctcatccaaacacacaacccactccgttggcagctctatcccgacgttggtg
agccggggagcagaccctctgaatggagccgcctccaagagagcccattctccctccctt
gaggagcaagccaagaggctaaaagaaacagagaaggcccgaatccacatagcgtga
DBGET
integrated database retrieval system
