Syngnathoides biaculeatus (alligator pipefish): 133510024
Help
Entry
133510024 CDS
T09681
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133510024 (hps1)
Membrane trafficking [BR:
sbia04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
133510024 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
Motif
Other DBs
NCBI-GeneID:
133510024
NCBI-ProteinID:
XP_061693663
LinkDB
All DBs
Position
12:12168540..12181743
Genome browser
AA seq
678 aa
AA seq
DB search
MKALLITSESAEVLFHWTDPSFQHNIQEQYGVAQEEGQKLPAFEDSISTLFAPIIISCSS
MVDSLGDSYTCFNTENNHTYVLHQFDECLYIAVNGDGEEEEDDLRRKIHVTKKMIEVHFG
MVTLSGSLIRRELRPQDVEQRERLWKHLQSLLDTYNYLRENDQSFLVEAVERLIHPTLCE
QCIEFLERRLVQQLNSSVERAGEEVQHAFILVHTKLLAFYSSRNASTLATSDLLALIIMA
QNMYPSNMDQDEHSSEDVDSTSGSGPESFYTPQPSPTNSSGSEKQAREEATVFEFVDPDI
HMAEDSLHSLEVPPPDPSTPRRVFLEVSHKEGLYPMMPHSMYCLPLWPGITLVLLTKIPT
SAVAASVYMFLEAFAKLEKRLSEGQEGSSATRSQPTIYDIRSKLDKFIKALGPSDIQSAQ
LQNVWSEFKNRAFSRGGPGFTTDLIPWCKNMKTQLCGVYRQCFLIDSGESDVPRKLSPSL
QERAQAMLQEKLIDWKDFLLVKSKRNITMVSYLEDFPGLIHFICVDRSTGQMIAPSLYFT
ERTTSELGKGPVARFIKNKVWRLVSTTRRYLQKGYSTVTLRDGDFHFCYFLWFENETGYK
LEAAEMPILPDDTAPIGMLAWDYYRKLLRYYAKSHQGEVVKCYELLTVHLGVIPTDIILQ
HCRQLASKLWEPSRNPLL
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccttgctcatcacctccgagagcgctgaggtcctcttccactggacagaccca
agcttccaacacaacatccaggagcagtatggcgtggcccaggaagaaggccagaagctt
ccagcctttgaggacagcatcagcaccttgtttgcgcccatcatcatttcctgtagctcc
atggtggacagcctgggtgacagctacacgtgcttcaacacagagaacaaccacacttat
gtactacaccagttcgacgagtgtctctacattgctgtgaacggagacggcgaggaggag
gaggatgatctgaggaggaagatccatgtgaccaagaagatgattgaggtgcacttcgga
atggtcaccctcagcggtagcctgatcaggagagagctgcgtcctcaagacgtggagcag
agggaacgtctgtggaaacatctccagagcctgctggacacctacaactacctcagggaa
aacgaccagagcttcttggtggaggccgtagagagactgatccaccccacgctgtgcgag
cagtgcatcgagttcttggagcgccgtttagttcagcagctcaactccagcgtggagagg
gcaggagaagaagtccagcatgcattcatcctggtgcacaccaaactgctggccttctac
tccagccgcaacgcgagcacgctcgccacttcagacctgctggccctcatcatcatggcc
cagaacatgtatcctagcaacatggaccaagacgaacattcttctgaggacgttgatagt
accagcggctcaggcccagaaagcttctacactcctcagccttcccctaccaattccagt
ggttcagaaaaacaagcgagagaagaagctacagtgtttgagtttgtggatccagacatt
catatggcagaagacagtctgcacagtctggaggttcctccccctgacccatccacgcca
cgcagggtctttcttgaagtttcccacaaggagggcctgtatcccatgatgcctcactcc
atgtactgtctgccactatggcccggcataacactggtgctgctcactaagattcccacg
agtgcagtggccgcgtccgtgtacatgttcctagaggcctttgccaagctggagaagcgt
ttgagtgaaggccaggaagggtcgtctgctacgagaagtcaaccaacaatatatgatatc
agaagcaagctggacaagtttatcaaagctcttgggcccagtgacattcagtctgcacag
ttacaaaatgtctggagcgagtttaaaaaccgagccttttcccgaggtggacctggcttc
accacagatcttatcccttggtgcaagaacatgaagacccagctgtgtggcgtttatcgc
cagtgcttcctcattgactccggagagtctgacgttcctcggaaactctcccccagtctg
caggagcgagcccaggccatgctgcaggaaaagctgatagactggaaggacttcttgctg
gtgaaaagcaagagaaacatcacaatggtgtcctacctggaggacttcccaggcctcatc
cacttcatctgcgtggatcgatccacgggccagatgatcgcaccatccctttacttcacc
gagcgcactacgtcggagctgggcaaaggacccgtggctcggtttatcaaaaacaaggtg
tggaggctggtgagcacaacacggcgctacctccaaaagggttactccaccgtcaccctg
cgagacggcgacttccacttctgctacttcctctggttcgaaaatgaaaccggctacaag
ttggaggcagcggaaatgcccatcctacccgatgacactgcccccatcgggatgctggcg
tgggactactacaggaagctcctgcgctactacgctaagagccaccagggcgaagtggtg
aagtgctacgagttgctaacggtgcacctgggtgtcatccccactgacatcatcctgcag
cactgcagacagctggccagcaagctatgggagccctcacgcaacccactcctctag
DBGET
integrated database retrieval system
