Syngnathoides biaculeatus (alligator pipefish): 133510097
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Entry
133510097 CDS
T09681
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbia03009
]
133510097 (rrp12)
Ribosome biogenesis [BR:
sbia03009
]
Eukaryotic type
90S particles
Other 90S particles
133510097 (rrp12)
Pre-60S particles
Other pre-60S particles
133510097 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
133510097
NCBI-ProteinID:
XP_061693766
LinkDB
All DBs
Position
12:12760241..12776352
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AA seq
1288 aa
AA seq
DB search
MAKSGKLRSGTGSKLKRWKKGHSSDSNPQTSRHRHAAKSRFFSRPSGKSDLTVDALKLHN
ELQTGSLEIKTASRQDARMEDEPDQVLSDRTSGTFLSGLSDCSNLTFRKVQRFWESNSAA
HKEICAVLAAVTEVIRSQGGKETETEYFAALMTTLEVVDSTESQAAVAYLLNLTMKRVPA
PVLVSKFSDTTKVLMDVLSQQASCESTSALKWVVSCLATLLRKQDATVWTYPSTLQAYHG
LLSFTVHSKPKVRKAAQQGVCAILRGSDFLFTDKAPSHHPAAASTAKFCIKEMEQAGGSR
EDTTTLHVLGLLKELILTFPHGAIKSCCEMLLRVMTLSHVLVTASAMQTFHRLFSGKSSA
SNLSPELNAQIITALYDYLPSETDLQPLLAWLAVMEKAHVNLASLQSSLSLGHLPRLFSA
AMSCLLSPHTQVVSAASRTLKTLLTECVGPRMEEIGIVSATASAGNPSYVCKMFRIVEEG
LSYRFHASWPFVLQILGCFYKVAGKHAHPVMTKSLQSLADLRATPRFPYSGEVDLAVGGA
VESMGPEVVLGVVPLNITGYDDDLEFPRSWLVPVIRDHVKNTHLGFFTSYFLPLASTLKQ
RAEEFAQMGQKLEAKVYHTLQLQIWTMLPGFCMCPVDLVTSFKGVARSLGTAINEQPDLR
LTICQALRTVINKSCTTEEEKTEVGRFSKNFLPILFNVYSQQPAKGESGAYRMAVLDTIK
VYFTITEQQMINTFLQKATERLTSAESTEFTRLSMMDLVVAMAPFLDQLSMTKTFELIRP
YLEMKEPGMQKKAYRVLEEMCAGERDECRSFVLANFEILKAVLVETLKSASSPAKRPRLK
CLIYIMKTLTVEHKDFITSLLPEVIVCTKEMSVGTRKNAYTLLVEIGNAFVRFCGNAKEA
MEQYLMMVYAGLTGSITMITCTVLALTRLVFEYKDSIEVSTMEQLLHNVCLLLTSRTREV
VKAALSFIKVILFVMEPKTLASHVTVMMEGIGNLTDDSRRHFRAKLKNIFTKFIRKFGFE
LVKSMLPVEHHKVLANIRKADARDKRKKQAAEQQEDSDSEEEVPKVANNSIEDILAGSDS
DLSDDEEKAVRKKKGGKRQKGRAWLKEGEDDDPLNFLDPKVSQRVLATNPENNNNKQAKT
AHGFKMTSDGRLIIRGEDDQKDEDEMNDILEEAGVKSKKAQKRKLRDDNLDDIDTEPQPK
YKAGGSGIHRPLGGSRDFGADYKSKKGKGDIKKAGKPDPYAYIPLKKAQLNRRKRAKLQG
QFKGMVRGAQKGALSGRKMQNKRKGRRT
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatcgggaaaacttcggtccgggacgggttcgaaattaaaaagatggaagaaa
ggacacagcagcgactccaacccacagacgagtcgacatcgacatgctgctaaaagtcgc
tttttcagccgaccctccggaaaaagtgatctgacagttgatgctctcaagctccacaat
gagctgcagacgggttcactggagatcaaaacagcaagccggcaagatgcacgcatggag
gatgagccggatcaggtgttgtcggataggacgtcgggcaccttcctcagcggcctctcg
gactgctccaacctgaccttcaggaaggtgcaacgcttttgggagtctaactcggctgct
cacaaagagatttgcgctgtgttggcagctgttacggaggtgattcgcagccagggaggg
aaggagacagaaacagagtattttgctgctttgatgaccactctggaggtggtggattcc
acggaatcgcaggctgcagttgcgtacctcctcaacctcaccatgaaaagggttcccgcc
ccggtgctcgtgtccaaattctcagacaccaccaaggttctgatggacgtgttgtcccag
caggcctcgtgtgaaagcacctcagctctcaaatgggttgtgtcatgtttggccactctg
ttgagaaaacaagatgcgactgtgtggacttacccgtccactctccaggcataccacggt
ctgctcagtttcaccgtgcacagcaaacccaaggtgcgtaaagcagcacagcaaggtgtg
tgtgctatcctacgcgggagtgacttcctgttcacagacaaagcaccttcccatcacccc
gctgccgcctccacagccaagttctgcatcaaggagatggagcaggcaggagggagcaga
gaagacaccaccacgctccacgtgctggggctcctgaaggagctgatcttgaccttccct
cacggggccatcaagtcgtgttgtgagatgttgttgcgggtcatgaccctcagccatgtg
ctggttactgccagtgccatgcagaccttccacagactcttcagtgggaagtcgagcgcc
tcaaacctgtcacctgaactcaatgcacaaatcatcacagctctgtacgactacctgccc
agtgagactgacctgcagcctctgctggcctggctcgccgtcatggagaaggcgcacgtt
aacttggcaagtttgcagagttctctgagtctgggccatctgcctcgcctcttctctgct
gccatgtcctgcttgttgtcccctcacacgcaggtggtctctgcagcttccaggacgctc
aagacactgttgaccgaatgtgtgggtcctcgcatggaggaaattggcatagtatcagcc
acagcctctgcagggaacccctcctatgtctgcaaaatgttccgcattgttgaggaaggc
ttgtcctatcgctttcatgcctcctggccctttgttttgcaaatacttggttgcttttac
aaggttgcaggaaaacatgcgcaccccgtcatgaccaagtctttgcagtctcttgccgac
ctgcgtgccactcctcggttcccatatagtggtgaggtggatctggccgtagggggtgct
gtggagagtatgggccccgaggttgtgttgggggtcgtgcctctcaacatcactggctat
gacgatgacctggagttcccacggagctggcttgtcccggtcatccgcgatcatgtgaag
aacactcacctgggcttcttcacctcctatttcctccctctggcctctacgctcaagcag
agagctgaagagtttgcacaaatgggtcagaaactggaagccaaagtctatcatacttta
cagcttcagatttggaccatgcttcctggtttttgcatgtgtcccgtggacctggtgacg
tccttcaaaggcgtcgcccgttccctcggcactgccatcaacgagcagcccgacctgagg
ctcaccatctgccaagccctgcgcaccgtcatcaataagagctgcacgactgaggaggaa
aagactgaagtgggtcgcttctccaagaacttcctgcctatcctcttcaatgtgtacagc
cagcagcctgccaagggagagtctggggcctacagaatggccgtcttggacaccattaaa
gtctatttcactatcactgaacagcagatgatcaacacgttcctgcaaaaagccactgag
aggttgactagtgcagaaagcacagagttcacacggttgtcaatgatggaccttgtggtt
gccatggcacccttcttggatcagctcagcatgacgaagacatttgagctcatcaggccg
tatttggagatgaaagaaccaggcatgcagaagaaggcataccgcgtgctcgaggagatg
tgcgcgggcgagcgagatgagtgcaggtcgtttgttttggccaactttgagattctgaag
gcggtcttggtggagactctgaaaagtgcttcgtcgccagcaaaaaggccgcggctgaag
tgtctgatatacatcatgaaaacactcaccgtagagcacaaagacttcatcacgtcgctg
ctgcctgaggtgatcgtatgcaccaaggaaatgtcagttggcactcgcaagaacgcgtac
accctgctggtggaaataggaaacgcgtttgtgcgcttctgtgggaatgctaaagaggca
atggaacaatatctgatgatggtgtacgcaggcctcacgggctccatcaccatgatcacc
tgtaccgtgttggccctcacacgactggtgttcgagtataaagactccattgaggtgtcc
actatggagcagctcctgcacaacgtgtgtctgctgctgacctctcgcaccagagaggtg
gtcaaagcggcgctgagcttcatcaaggtcatcctttttgtcatggagcccaagacgttg
gcgtcgcacgtcacagtgatgatggaaggcatcgggaatctcaccgatgactcgaggagg
cacttcagagccaaactcaagaatatcttcactaagtttatcaggaagtttgggtttgag
ctggtgaagagcatgttgcctgtggaacaccacaaggttctggccaacattcgcaaggcg
gatgctcgcgataagagaaagaaacaagcggcggagcagcaggaagactccgacagcgag
gaggaggtgcctaaagttgccaataacagtattgaggacatcctggcagggtcagacagc
gacctgtcagacgatgaagaaaaggccgtgaggaagaagaaaggtgggaagcggcagaag
ggtcgggcatggctgaaagagggagaagatgacgacccgctcaacttcttggaccccaaa
gtttcacaaagagtgcttgccaccaaccccgagaataataataataaacaggccaagacg
gcgcacggcttcaagatgacgtcagacgggcggctgataatcaggggagaggacgaccag
aaagatgaggacgagatgaatgatattctggaagaagccggagtgaaaagcaaaaaggca
cagaagaggaaacttcgagatgacaacttggatgatatagacacagaaccacagcccaaa
tataaagctggcgggtcgggcatccacagacctctgggagggagcagagactttggagca
gactataagtccaagaaagggaaaggggacattaagaaggcaggcaaaccggacccttat
gcttacatcccccttaagaaggcccagctcaatcgaaggaagcgggccaagctacagggc
cagttcaagggcatggtgagaggagcccagaagggggcattgtctggtagaaaaatgcag
aataagaggaaaggccgaagaacatga
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