Syngnathoides biaculeatus (alligator pipefish): 133510098
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Entry
133510098 CDS
T09681
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133510098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133510098
03016 Transfer RNA biogenesis [BR:
sbia03016
]
133510098
Enzymes [BR:
sbia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
133510098
Messenger RNA biogenesis [BR:
sbia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
133510098
Transfer RNA biogenesis [BR:
sbia03016
]
Prokaryotic type
tRNA degradation factors
133510098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
133510098
NCBI-ProteinID:
XP_061693767
LinkDB
All DBs
Position
12:complement(2957629..2969112)
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AA seq
770 aa
AA seq
DB search
MRRLLQLGRSFSWSRVRLCHQSVYKSHGQVRSAAVDLGDKKLEISTGRLAKFADGSAVVQ
LGDTSVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRELGTTDHEILTSRLI
DRSIRPLFPSGYFYDTQILCNLLAVDGVNDPDVLAINAASAALALSDIPWNGPIGAVRMG
LVDGELVVNPTRVEMATSTLNMIVAGAPSSQVVMIEASAENVLQQDFAHAVKVGVKHAQQ
IILAIQQLARELKVAKRTPPKMFSAPADMVAHVRQSVSEKIYAVFTDYTHDKISRDEAIN
KIRLETEEYLKEKFPQAEPFEVIESFNVVSRDIFRNLVLNEYRRCDGRELTALRDISCDV
DLFKPLHGSAVFQRGQTQVLCSVTFDSLESSIKADVITTALSGIKDKNFMLHYEFPPYAT
NEIGKMGGLNRRELGHGALAEKALRPVIPKDFPFTIRVTAEVLESNGSSSMASACGGSLA
LMDAGVPISSPVAGVAVGLISKCDPDKPSDMQDYRLLTDILGIEDYLGDMDFKLAGTNKG
ITALQADVKIPGLPLKVVMEAIQQATVAKREILGIMNKCLAKPRTNRKENGPVVEKVRVP
VSRRARFVGPGGYNLRRLQAQTGVTISQVDEETFSVFAPTPGALSEAQDFISELCRDDQE
QQLEFGAIYTATITEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIKHPSALGLEVGQQIQV
KYFGRDPTDGRMRLSRKVLQSPAATVVKTMSDKQSISMATAANDTRNGGP
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgtctactccagctcggacgttccttttcttggagccgcgtgcgtttgtgtcac
cagagcgtgtacaaaagtcacggccaggtccgaagtgcggccgtggaccttggagacaaa
aagctggagatctcgaccgggaggctcgccaagtttgccgatggctctgctgtagtccag
ctgggcgacacttcggtgatggtgactgctgtgagcaaaacgaaaccgtccccatcgcag
ttcatgccgcttgtggtagactacaggcagaaagcggcggcggccggcaggatccccacc
aactatttgaggcgggagctgggcaccaccgaccacgagattctcaccagcaggctcatc
gacagatccattcgacctctttttccatctggttacttttacgacactcagattctgtgt
aacttgctagctgtggatggcgtcaacgatccagatgtgctcgctatcaacgcagcctca
gcagctctggctctttccgacatcccttggaacggacccattggtgcggtgcgtatgggt
ttggtggacggcgagctggtggtcaaccccacgcgagtcgagatggcgaccagcacgctc
aacatgatcgtggccggagcccccagcagtcaagtggttatgatcgaggcgtcggccgag
aacgttctgcagcaggacttcgctcacgccgtcaaggtgggcgtcaagcacgcgcagcag
atcatcctggccatccagcagctggcgcgggagctcaaagtcgccaagcgcacgccgccc
aagatgttctcggctcccgcggacatggtggcgcacgtgcgacaatcagtgtcggagaag
atctacgccgttttcaccgattacacgcacgataagatctcgagagacgaagccatcaac
aagatccgcctggaaaccgaggagtacctaaaagagaaatttcctcaggccgaacctttt
gaagtcatcgagtccttcaacgttgtgagcagggacatcttcagaaatttagtgctcaac
gaatacagaaggtgtgacggcagagagttaacggcgttgagagacatctcctgcgacgta
gacctcttcaaaccgcttcacgggtcagctgttttccagagaggacaaacgcaggtactg
tgtagcgtcacgtttgattcgctggagtcaagcattaaagcggacgtcatcaccacagcg
ttaagtggcatcaaggacaaaaattttatgctccactatgagttcccgccctacgccacc
aacgagatcggcaagatgggaggcctcaacaggagggagctcggacacggggccctagcg
gagaaagcgctgcgaccggtcatccccaaagacttccctttcaccatcagggtgacggcc
gaggtgctggagtcgaacgggtcttcatccatggcctcggcgtgcggaggcagcctggcc
ctcatggacgcaggcgttcccatctcgtcacccgtggccggcgtcgccgtgggcctcatc
tccaagtgcgaccccgacaagccctccgacatgcaagactacagactgctcactgacatc
ctgggaatcgaggactaccttggagacatggacttcaaattagcaggaacaaacaaaggc
atcactgccttacaggcagatgtgaagattcctggtcttcctctcaaggtggtcatggag
gccatccagcaggccacggtggcaaaacgggagatcttgggcatcatgaacaagtgtctg
gccaagcccaggacgaacagaaaagaaaacgggcctgtcgtggagaaagttcgtgtgccc
gtgtccagacgggcccgcttcgtgggtccgggaggatacaaccttcgccggttacaagca
cagacgggcgtgaccatcagccaagtcgacgaggagaccttctccgtgtttgctcccacg
ccgggagcgctgagcgaggcgcaggacttcatcagcgagctctgcagagatgaccaagag
cagcagctggagtttggcgccatctacactgccacaatcactgaaataagggacattggc
gtgatggtgaagctctatcctaacatgagcgccgtcttgcttcacaactcccagttggac
cacaaacggatcaaacatccaagtgctttgggcttagaagtgggtcagcagattcaggtg
aagtactttggacgggaccccacggacggcaggatgcggctctcccgaaaagtgctccag
tcacccgccgccacggtggtcaagacgatgagcgacaagcagagcatctccatggcgacg
gccgcaaacgacacgagaaacggcggaccgtga
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