Syngnathoides biaculeatus (alligator pipefish): 133510103
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Entry
133510103 CDS
T09681
Symbol
piezo1
Name
(RefSeq) LOW QUALITY PROTEIN: piezo-type mechanosensitive ion channel component 1
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133510103 (piezo1)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133510103 (piezo1)
Membrane trafficking [BR:
sbia04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
133510103 (piezo1)
Ion channels [BR:
sbia04040
]
Other channels
Mechanosensitive channel (Piezo)
133510103 (piezo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_cap
Piezo_THU9_anchor
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
133510103
NCBI-ProteinID:
XP_061693774
LinkDB
All DBs
Position
12:complement(29265288..29590008)
Genome browser
AA seq
1997 aa
AA seq
DB search
MARNFSQVKLACLLRYNILSLVYFVYLLLLPWCVCPNKHNIRGHTGHFIKAIFCTSLLFI
LAHVCFQAILFTYVPLSIALCDNCSHLEIISRHIGLSRLPLEDSWILLRLLCPDLVLCGI
SLLTIILCRKKTRNIDMPDEATDDENEIEEESIEDEEGPFPGDASHDLSTTTSAKQLIEH
LKAVVHKVLLGLGRIFALSLLALAGITLPSAFSCVYFLLFIGVSTWWACHLPISHLGFKA
LYVMVGFFTAGHLVCLYLYQCLLAPVLFPPHSLWARLFGLKDIIKPGNCSTPFDFNFNAE
YDWPVYINPGILFLLYIISAMVLKTGCRGTLYQNEDKQQQLKTANEPKDEMLELSSWNKK
NEVCEDDTQLMLLCVGTQHSREEIVAEEDPSQLGFGLATGGQLTDSPFLMLGKIIMHQSY
VCALIAMMVWSITYHSWLTFVLLVWACLIWILRTRRHAAMLCSPFILVYSLALCCLQYAW
AMEXELPTTVGTMSLRQLGLHKAQYPCLRLGTMLLLTSTFWLLVHQSVKENFRRSRRRAT
PLEEVTTTGLNSTNESLLKVLGCMVLNFHAKYWIYVCGGMFLMISFVGKLVGYKIIYMLL
FLLCLSFYQVWIFIWRCLLKLFWWLVVAYTMLVLFSXYTYQFEDFPGYWRNFTGLTEPQL
AAIGLXTFALSELFTNILIPGFFLLACILQLHYFHKPFMRITDPECITPINRKSSCDKPS
STNVGMVSDLEEVLKNVINKSSNKVEFMASKWGLVMDRLLVLFKRFSDIMNKGQMILWTL
LELHIIKMVALYAVWVALDEPSVFNLVLVVLWSLAMPFSRFRPMASTLSTVWLCVIIMCK
MLYQLSVVNPTVYANNCSSPLLNETNLSQMEIMNSSLYKAPMDPAKWFGVRKEPTVLDYN
KNHLLALLLLVFEATVYRHQAHRYRQLQRSPPNIPALFPEVTKNTLDQGLIPCFKYLLNY
TFYKFGLEICFLMIVNVIGQRMNFLAIIHGCWLVAILVRRRRAAIARIWPIYCLFLAIFM
ISQYILCVGIPPALCKDYPWRWNRRLLMNSALIKWLYLPDFYTVPNSKNLIVDFVLLICA
SQQWQVFKYEQIEEWVVLAGDNTDNPDPMEGRLFNPAPNFVFCRCYLDMAKVLVFRHLFW
FVLSVVFLAGATRVSVFGLGYLLSCFFFFANGTQLLVKPSRTRLAVWDCLIIYNVAVIIS
KNILSILACVFIFEMQKAFCWMIQLFSLVCTVKGYYDPKYYSGNIETNLISDKNCHLPIE
EAGIIWDSICFLFLLLQRRVFLSFYFIHVIAELQAFRKQASRGFEFFKATVMKNMKSHQQ
AEIKSLSQLKRPMQRIRSRQQRFRDGHKVIEEDHQSQSAEMRTKRKKEHFSQPWLDHATV
LYSGWYYLFESDSEGEHELLSEEQKPEKQTAYQVAYQTWVNNVKRALKEYHKNRRQQRRF
VIVENESSTPQTSQEKACSETGSMFYHNTSQRPKRRFATVELELKLKWNKVVLVFGIHLW
MFFILPAVTERRFNQNFVAQLWYFFKCIYFALSAYQIRCGYPTRILGNFLTKNYTHLNLL
LFQGFRLVPFLVELRAVMDWVWTDTTLSLSNWMCVEDIYANIFIIKCSHGTEKRYPQVKA
QKKKKMVKYGMGGLIIIFLVCIIWFPLLFISLVRSVGVVNHPIDVTVTVKLGGYXPIFTM
SVQQQSIQAFTELEFEKLTKKFGNNAVAMQFISLYGYEDIVTAMIEGSSGSVXRISPPSR
QEVIKELLGSPADLTLRLPWNLQKENIISEDAVNTVECLPMQEEQDIEPIRKELKDARDS
LTTGKAPGEDTIQWRLLIIIIKSFHDAMTSTIVFDDSISETFKIKSENEENYLNITLSLM
SDNSLSSSGKWEWXDIRIGGCAPSSCGVLPMVIFNDKVSPPSLGFLAGYGIMGFYVSVVL
VIGKFVRGFFSDISHSIMFEELPCVDRILKLCTDIFLVRETRELELEEELYSKLIFPYRS
PETMIKWTRDIHRQDKH
NT seq
5994 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaaacttcagtcaagtcaaattggcttgtcttcttcgctacaacatactgtcc
ctggtttactttgtttaccttttgttgctgccgtggtgtgtgtgtcctaacaaacacaac
ataagaggacatacaggacatttcatcaaagcaatattctgtaccagtctactttttatt
cttgctcatgtctgcttccaggcaattctattcacgtatgttcctttaagcattgctctt
tgtgacaactgttcacacctggagatcatatccagacatattggactgtccaggcttcca
ttggaggattcttggattttattgcgccttctttgtcctgaccttgtactctgtgggatt
tccttgttaaccatcatcctttgtagaaaaaaaacaagaaatattgatatgccagatgaa
gcaacagatgatgagaatgaaatcgaggaagaatcaattgaagatgaagaaggaccattt
cctggtgacgccagtcacgacttgtcaactacaacatcagccaagcagctgatcgaacat
ctaaaggctgtagtccataaagtactgctgggccttgggagaatctttgccttgagctta
ctcgctttggctggaatcacattgccgtctgcattctcatgcgtctacttcctcctcttc
attggtgttagcacatggtgggcatgtcaccttccaattagccatctgggtttcaaggct
ctgtatgttatggtgggcttcttcactgctggccaccttgtttgtctgtacctataccag
tgtctcctggctcctgttctcttcccaccacacagtctgtgggcaaggctcttcggtctg
aaggacattatcaaacctggaaactgctctacaccatttgacttcaactttaatgctgaa
tatgactggccagtttatatcaacccaggaatactcttcctactctacattatctcagca
atggttctgaagacaggatgtcgtggaacactttaccagaatgaagacaagcagcagcag
ctcaaaactgcaaatgagcctaaggatgagatgctggaattgagttcctggaataaaaaa
aatgaggtctgtgaagatgacacacaactcatgctgctgtgtgtaggaacacagcacagt
cgggaagaaattgttgctgaagaagatccttcacaactcggatttggtcttgcaacaggt
ggtcaactgactgacagcccatttttgatgctgggaaagattatcatgcatcagagttat
gtctgtgctcttatagcgatgatggtttggagcataacataccacagctggctgacattt
gtgctactggtttgggcttgtctcatctggattctgcgcaccagacgacatgcagccatg
ctgtgttctccgtttatcctggtctacagtctggcactgtgttgtctacagtatgcatgg
gccatggaanctgaactgcctaccactgtgggaaccatgagtctcagacagttagggcta
cataaagcccagtacccctgtctgagactgggaacaatgctcctcctcacttcaactttc
tggcttttagtacatcaatcagtaaaggaaaacttccgcaggagtaggagaagggctaca
ccactagaagaagtgactacaacagggctcaattccacaaatgaatctctgctaaaggtc
ctgggatgcatggtgctgaattttcatgccaaatattggatctatgtgtgtggtggaatg
ttcctcatgatttcttttgtgggaaaacttgttggatacaagatcatctacatgctgctt
ttcctgctctgcctctccttttatcaggtttggatctttatatggagatgtcttttgaag
ctcttctggtggcttgttgtggcctacaccatgctggtgctattctccntctacacatac
caatttgaagacttccctggctattggaggaattttactggactcacagaaccacagctt
gcagccatcggtctgtagacgtttgccctctcagagctcttcactaatattctgatccct
ggattcttcctgttggcctgtattctccagctacactatttccacaaacccttcatgaga
atcactgaccctgaatgtattacaccaattaaccgaaaaagcagctgtgacaagccaagt
tcaactaatgttggaatggtctctgatttggaagaagtgttaaagaatgtcatcaataaa
tcgagtaataaagtggaatttatggccagcaagtggggtctggtgatggacagattactg
gttctgttcaaaaggttctcagacattatgaacaaaggtcaaatgattctctggactctt
ctggagcttcacataattaaaatggtggcattgtatgctgtgtgggttgcccttgacgag
ccatctgtgttcaacctggttctggtggtactgtggtcgttggcgatgccatttagtcgc
ttcagaccaatggcttccacactgtcaacagtttggttgtgtgtaatcatcatgtgtaaa
atgttgtaccagcttagtgttgtgaaccctactgtgtacgccaacaactgcagttcacca
cttttaaatgaaaccaacctttcacaaatggaaataatgaactcatccctgtataaggca
cccatggacccagcaaaatggtttggcgtcagaaaggaacctactgtactggactataac
aagaaccatttattagcactgctgttgttggtgtttgaagcgacagtgtatcgtcaccag
gcccaccgctatcgtcaattgcaacgatctcccccaaacatacctgctctattcccagaa
gtcactaagaacactttagaccaaggcctcataccctgcttcaagtacctgctgaactac
actttctacaagtttggattagagatatgcttcctgatgattgtgaatgtgattggccaa
cggatgaacttcttggccataatccatggttgttggttggtagccatcttggtgaggcga
cgtcgcgcagctattgcaaggatatggccaatatattgtctctttctggccatcttcatg
atctctcaatatatactgtgcgtgggtataccacctgctctgtgtaaagattacccatgg
cgttggaacagacgacttttaatgaactcagctcttattaaatggctttatttgccagac
ttctacactgtccctaactccaaaaaccttatagtggactttgttcttctaatttgtgca
tcccagcagtggcaagtgtttaagtatgagcagatagaggagtgggtggttctagctgga
gacaataccgacaaccctgatccgatggaagggcgactgtttaatcctgcacctaacttt
gtcttttgcaggtgttacctcgacatggctaaggttttggtttttcgccacttattctgg
tttgtactctcagtggtcttcctggctggggcaacacgggtctctgtgtttggactggga
taccttctctcttgtttttttttttttgctaatgggacccaactgttggtgaaaccctcc
aggacccgccttgccgtgtgggattgcctcatcatctacaatgtggcagtcatcatttca
aaaaatattctatcaattctggcatgtgtctttattttcgaaatgcagaaggccttttgt
tggatgatccaactctttagtttagtttgtacagtcaaaggatactacgatcctaagtat
tattctggaaatattgaaacgaacctaattagtgacaagaactgtcacctcccaatagag
gaagctgggatcatctgggacagtatttgttttctcttcctgttgctgcagagaagggtt
ttcctcagtttctatttcattcatgtaatagcagaattacaggcatttcgtaaacaggcc
tcaagggggtttgagttcttcaaagccactgtaatgaaaaacatgaaatcacaccaacag
gctgagataaaatccttatcccagctcaagcgaccaatgcaaagaatccgctccagacag
cagaggttcagagatggacataaagttattgaagaagaccaccagagtcaaagtgcggaa
atgaggaccaagaggaaaaaggaacacttctctcaaccatggttggaccatgcaacagtt
ctgtattcaggatggtactacctgtttgaatcagacagtgaaggtgaacatgaactgttg
tcagaggaacagaagccggagaaacagacagcctatcaggtggcttatcaaacatgggtg
aacaatgtgaaaagagctctgaaagaatatcacaaaaaccgaagacaacagagaagattt
gtaatagttgagaatgaaagttccacaccacagacatcacaagagaaggcgtgttcagag
acagggtctatgttttaccacaatactagtcaaagaccaaaaagacgatttgctacagta
gaactggaactgaagttgaaatggaacaaggttgttctcgtgtttgggatacacctgtgg
atgttctttatcctacctgctgtcactgaaaggcgattcaatcagaactttgttgcccag
ctgtggtacttttttaagtgtatttactttgctctgtcagcgtaccagatccgttgtggg
taccctacacgtattcttggcaacttcctcaccaaaaattacacccacctaaacttgctt
ctcttccaaggttttcgtctagttcctttccttgtcgagctgcgagcagtaatggactgg
gtttggacagataccactctgtctctctccaactggatgtgtgtggaagacatttatgca
aacattttcatcatcaaatgcagccatggaacagagaagagatatccccaggttaaagcg
caaaagaaaaagaagatggtgaaatatggaatgggtggcctcatcatcatcttcttagtg
tgcatcatatggtttcccctgctcttcatttcactggtcagatctgtcggtgttgttaac
caccccattgatgtcactgttactgtcaagctgggaggatattagcctatcttcactatg
agtgtccagcagcagtcgatccaagccttcacagagttggaatttgaaaaactcaccaaa
aagtttgggaacaatgcggtagccatgcagttcatttcactttatggttatgaggacatt
gttacagcaatgattgaaggcagttcaggctcagtttagagaataagcccccccagcaga
caggaagtcataaaagaactgctaggaagccccgctgacctaacattgcgtctaccatgg
aatttacaaaaggagaacatcatctcagaagatgccgtcaacactgttgagtgtctgcca
atgcaagaggagcaggacattgaaccaatacgcaaagaactgaaagacgcccgggactcc
ctcaccactggtaaagccccgggggaggacactatccagtggaggctgctgatcatcatc
atcaagtccttccacgatgccatgactagcaccatcgtcttcgatgactcaatctcagag
actttcaagatcaagagtgaaaatgaagaaaactacctgaacataaccctgtcgctgatg
agcgacaattcattgagctccagtggaaaatgggaatggtgagacatcaggattggaggc
tgtgccccttcttcatgtggggttttgccaatggtcatattcaatgacaaagtcagtcca
cccagtcttggcttcctggctggatatgggatcatgggtttctatgtttccgtggtcctg
gtcattggaaagtttgtacgaggcttcttcagtgatatctctcactccatcatgtttgag
gagcttccctgtgtggaccgcattctgaagctttgtacggacatcttcctggtgcgtgag
actagagagctggagctggaagaggagctttattcaaaactcatcttcccttatcgatca
ccggaaaccatgattaaatggaccagggacatccacagacaagacaaacattga
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