Syngnathoides biaculeatus (alligator pipefish): 133510152
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Entry
133510152 CDS
T09681
Symbol
exo1
Name
(RefSeq) exonuclease 1 isoform X1
KO
K10746
exonuclease 1 [EC:3.1.-.-]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
133510152 (exo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbia03032
]
133510152 (exo1)
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133510152 (exo1)
DNA replication proteins [BR:
sbia03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
133510152 (exo1)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
133510152 (exo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
XPG_I_2
TPR_2
CppA_N
Motif
Other DBs
NCBI-GeneID:
133510152
NCBI-ProteinID:
XP_061693866
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All DBs
Position
12:25765146..25793135
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AA seq
713 aa
AA seq
DB search
MGIPGLLQFIKDAGEPINVKKYKGQTVAVDTYCWLHKGAFSCAEKLAKGELTDQYVWYCM
KYVDMLFSFNVKPILVFDGRNLPSKRQVEKARRERREANLQKGRQLLRDGKLSEARDCFT
RCVNITPAMAHNLIKAARAREVDCIVAPYEADAQLAFLTKSGLAHAVITEDSDLLAFGCK
KVILKMDKQGNGLEIDQSNLGRCRSLGNIFTEEKFRYMCILSGCDYLASLHGIGLGKACK
LLRLAKDPDILKVIKKMGQYLKMDIEVPKEYIEGFVRANRTFLYQLVFDPVKRKIVPLNP
YEEDINPATLSYAGVPVGDDKAFQMALGNLDINTMEKIDDFKPDKPKTEALTHRSCSWNK
SRVANPTGLSIWSQSTKASSTVPAQIAAFPDRPPSSRGKERVISLARARLPFKTVQVKRP
REDTLSDQDVLQQYSSVKRSKSDQQPERLMLIPVNQPRSYNCFATLLQRRNQDVDEGKAI
TSRFFSNSSSDASSVKESAQVGFGHSVESNATSSPIEHTSEPCVRTNYDDGSEGPEVSSV
ETPSLPPFPNTFSPSSGSQGLRLFDWSDSSSFTDRSQKPKSSSHLDVLQQFQYKKDSLSL
STKTSIDAKPKGEDKPAGSPHSQDSGYFCQSEPSLVSLYKDETPSCGSNPYHSVPVAGLS
KPKFRSLVKPTKVQALGPARASGLRKKSSTNNENNPGFQATISSLWKNYGFKK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggggatccctgggcttctgcagttcatcaaagatgcaggggagcccatcaatgtgaag
aaatacaaaggccagacggtggcagtagacacctactgttggcttcataaaggagcattt
tcatgtgctgaaaagcttgcgaagggagaactgactgatcagtatgtatggtactgcatg
aaatatgtggacatgctgttttcctttaatgtgaaaccaattctagtatttgacggacgc
aatctaccttcaaaacgacaagtggaaaaggctcgcagagagcgtcgagaagccaacctt
caaaaaggccggcagctgttacgagatggcaaactttctgaggcccgagactgttttacc
cgatgtgtcaacatcaccccagccatggctcataacctgattaaggctgcaagggcgagg
gaagtagactgcattgtggcgccatatgaagctgatgctcaactggccttcctgaccaag
tctggtttggctcatgcagtcatcacggaagactctgatcttttggcatttggctgtaaa
aaggtgatcctaaaaatggacaagcagggtaatggcctggaaattgaccagagtaacctg
ggccggtgtcgttctttgggcaacattttcacagaggagaagtttcgctatatgtgcata
ctttccggctgtgactacctagcttctctgcatggtatcggtctgggcaaagcctgcaag
ctgctgagactggcaaaagaccctgatatcctcaaggtgatcaagaagatgggccaatac
ttaaagatggatatagaagtccctaaggagtacatcgaaggatttgtcagagccaatcga
accttcctttaccagctggtgtttgatcctgtcaagaggaagattgtacccctcaacccg
tatgaagaggacatcaaccctgccaccctcagctatgctggagttcctgtaggagatgac
aaagcctttcagatggccttaggaaaccttgacattaacacaatggagaagatcgatgac
tttaagccagacaaaccaaagacagaggcattaacacaccgcagttgcagctggaataaa
agcagagtcgccaatcccaccgggctcagtatttggagccaaagcacaaaggcatcatct
actgtaccagcccagattgctgccttccctgacaggcctccatccagtagggggaaggag
agagtcatcagcttggctcgggccaggcttcccttcaaaactgtgcaagtgaagagacca
cgagaagacactctatcagatcaggatgttctacagcagtactccagtgtgaagcgatcc
aagtcagaccagcaaccagaaaggttgatgttaataccagtcaatcagccacggtcatac
aactgctttgctacactcctgcagaggaggaaccaggatgtcgatgaaggcaaggctatt
accagcagattcttcagcaattccagttcagatgccagcagtgtgaaggaatctgctcaa
gtgggtttcggtcatagtgtggagtcaaacgcaacatcaagcccgattgagcacacatcc
gaaccctgtgtccgaaccaattatgatgatggttcagaaggtccagaagtctcatctgtg
gaaacacccagtctgcctccttttccaaataccttttccccaagttcaggcagtcagggt
ctaaggttgtttgactggtcagacagttcatcctttactgatcgatcacagaaacccaag
tctagttcacacctcgatgtcctgcagcagttccagtacaagaaggatagtctctcctta
tccaccaagacctccattgacgcaaaacccaaaggggaggacaaacctgcaggctctcca
cactcccaagacagtggctacttttgtcaatccgagccttcccttgtttctttatacaaa
gatgaaacaccctcctgtggatccaacccctaccattctgtgcctgttgcaggtttatca
aagcccaagttcaggagtctggttaaacccacaaaggtacaagcattgggaccagcaagg
gcaagtggattgaggaagaaatcctccacaaataatgagaacaatcctggtttccaggca
accatcagcagtctatggaagaattacggcttcaaaaagtaa
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