Syngnathoides biaculeatus (alligator pipefish): 133510421
Help
Entry
133510421 CDS
T09681
Symbol
abca4b
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133510421 (abca4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbia02000
]
133510421 (abca4b)
Transporters [BR:
sbia02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
133510421 (abca4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_22
AAA_23
Motif
Other DBs
NCBI-GeneID:
133510421
NCBI-ProteinID:
XP_061694281
LinkDB
All DBs
Position
13:complement(7321904..7361827)
Genome browser
AA seq
2305 aa
AA seq
DB search
MKTGSQIRLLLWKNWTLRKRQKVRFLVELLWPVLLFVGLVWLRKANPLYQQHQCHFPNKA
MPSAGVLPWLQGIFCNADNPCFRHPTRGESPGVVSNYNNSVLSRFYADILEMFDDSEVRQ
LGRLWQEVANFSDFVDTLRKNPAVVSGRGLKIEDILKDDELLTAFLLRDAELSESVVYEL
TNARIRIEQFASGVPALQLKDIACSQALLERFIIFPSRRGLHGVRNAMCALGQARLQRIE
DALYANVDFFKIFRLLPRVADGASDGVDLRRWGRVLGTTSEKIGELMRRDNSQALVRAVG
SLLSAGGPASLSELTASVSGLFCGYPEGGGARVLSFNWYEDNNYKVFLGVNGSRGRDTYV
YDHTTTAFCNSLMQTLESNPLTKVVWNSVKPLLMGKILYTPDSPAVRKILKNANTTFEEL
ERLHNFGKMWEEVGPQLWAFFQDSVQMNIIRDTLANPTVMNFVDQNLEDANMTTRDILNF
LYSGPEERREAGMPSFDWRNILNVTDQLIRTVNQYAECISLNKFVAYTDESQMIHQALYL
LEENKFWAGVVFTDMYPWTTSVPPHVKYKIRMDIDAVERTNKIKDRYWDPGPRADPVDDQ
RYIWGGFAYLQDMIEHGIIKVQTGHDWPLGVYVQQMPYPCYVDDLFMITLNRCFPMFMVL
AWIYSVSMTVKSVVLEKELRLKETLKAMGVANGVLWCTWFIDSFVTMAASAALLTCIIVG
GKVLNYSDPLLVYVFLLTFTVATIMQCFLMSVFFSKANLAAACSGVLYFTLYLPHVLCFA
WQDRLTSNMKMAASFLSPVAFGFGTEYLSRYEEQGVGLQWDNIQTSPLEKDTYSFLTSVL
MMAVDATLYGVLAWYLDNVFPGQYGIGRPFYFPLQPSYWHKASPAPPATDEPVAPEVEKA
EKDPESGGGPTDTVNNCNGSTSRKTCKHQSKRERLEREKEWLRRQEEDNKEEDKENEGQE
GVLLFESDPVNLELGVRIRGLVKVFPGGSRPAVDRLSLNFYEGQITSFLGHNGAGKTTTM
SILTGLFPPTSGSAYIYGKDIRTEMDAVRSSLGMCPQYNILFNHLTVEEHILFYSLLKGR
TPAEARMEVEDMLQDLGLPHKRDDEAQNLSGGMQRKLSVAMAFVGGSKVVILDEPTSGVD
PYSRRSIWDLLLKYRSGRTVILSTHHMDEADMLSDRIAIISKGRLHCCGSPLFLKNCFGA
GFYLTLVRRIKDVKNKENDCDCASDCSCSCSICTRYKDQSQNLCQNAERVLEGDLESISG
LVHHHVPEAKLIEAIGQELTFLLPSRGFKHRAYASLFRELEETLADVGLSSFGISDTSLE
EIFLKVTADGEAAALNAAPAGSYDAAEANGVTMHVASDCSAGKGSRQVKGARLVLKQFHA
LLVKRFHHATRSRKDFVAQIVLPASFVLVALVFTTILPPFGEYPSLTLTPWMYGPQITFF
SNEQPSDPAMRDFAERFLRRPGIGTRCMQGDPLGMPCSDEASEWRRPDVDGATADVLESP
EWNERNPSPSCQCSSSGKLTMMPVCPAGAGGPPPPERLEATGDTMMDLSERNISDFLVKT
YPSLIRKGLKSKYWVNEQRYGGLSVGGHLPILDLEPKDIENVFRQLGRMLNVTGGQHSAV
ALREFGPFLRYMESEFNVKVWYNNKGWHAMVAFMNVANNAIMRAYLPTSAKPVEFGITAI
NHPLNLTKEQLSEVTVLTTSVNAVVAICVIFAMSFIPASFVLYLIQERATKAKHLQFVSG
VSPFIYWLANFFWDMVNYSISAAMVVGIFVAFDKKCYTSPSNLPALLALLLLYGWSVTPM
MYPMSYLFDVPSTAYVSLSCINLFIGINSSAVTFVLELFDNNRSLLMFNEWLKKGLLVFP
HFCLGRGLIDMAMNQAVTDVYARFGEEHADNAFRWDFVGRNVCFMAAEGFVYFALNLLIQ
YRFFLDRCRSLSDGKRLPPADEDDDVARERRRVYDGGSKSDVLQIQDLSKTYVGRKRAAV
DGICVGVPAGECFGLLGVNGAGKTTTFKMLTGDTDVSSGDASVVGYSILKEILDVHQNMG
YCPQFDAIDGLLTGREHLYLYARLRGVPEDEIPRVAEWGIEKLGLSEYAGRCAGTYSGGN
KRKLSTAIAMIGCPALVLLDEPTTGMDPHSRRFLWNAILSVIRDGRAVVLTSHSMEECEA
LCTRLAIMVNGTFKCLGTIQHLKYKFGDGYVLSVKMAPGKAGSPPDLAPVEAFMESSFPA
CVRREKHYNTLQYHIAAASLARIFQLLVSNKDRLCIQDYSVTQTTLDQVFVNFAKQQTAE
DDAVTSQRRGRKDVKIVPIKRKSCK
NT seq
6918 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgggtctcagatccgcctgctgctctggaagaactggaccctgagaaagagg
cagaaggttcgcttcctggtggagctcttgtggcccgtgttgctgttcgtgggcctggtg
tggctgaggaaggccaacccgctctaccagcagcaccaatgccacttccccaacaaggcc
atgccgtccgccggcgtcctgccttggctccagggcatcttctgcaacgccgacaacccc
tgcttccggcaccccaccagaggagagtcgccgggggtggtctccaactacaacaattcc
gtattgtcacgtttctacgcggacatcttggagatgttcgacgactcggaggtgcgccag
ctgggacgtctgtggcaggaggtcgcgaacttctccgacttcgtggacacgctacgcaag
aacccggccgtcgtgtctggtcgcggcctgaagatcgaggacatcctgaaggacgacgag
cttctgacggcgttcttgctgcgagacgccgagctgtccgagtcggtcgtctacgagctg
accaacgcccggattcgaattgaacagttcgcgtcgggcgttccggcgctgcagctgaag
gacatcgcgtgtagccaagcgctgctggagcgcttcatcatcttcccgagccgccgcggc
ctccacggcgtccgcaacgccatgtgcgccctcggccaggcgcggctgcagaggatcgag
gacgccctctacgccaacgtggacttcttcaagatcttccgactgttgccgcgcgtcgcg
gacggcgcctccgacggggtcgacctgcggcggtggggtcgcgtcctcgggacgacgtcg
gagaagatcggagagctgatgcggcgcgacaactcccaggcgctcgtccgagccgtcggc
tctctgctctccgccggcggccccgcctccctctcggagctgacggcgtccgtgtccggc
ctcttttgcggctacccggagggcggcggtgcgcgcgttctctccttcaactggtacgaa
gacaacaactacaaggtcttcctgggggtcaacggcagccgcggccgcgacacttacgtg
tacgaccacaccaccaccgccttctgcaacagcctgatgcagacgctggaatccaacccg
ctcaccaaagtggtgtggaattccgtcaagcccctgctgatgggaaagattctgtacacc
cccgactcccccgcagtccgcaagatattaaagaacgcgaacaccacctttgaggagctg
gagaggctgcacaattttggcaagatgtgggaagaggtcggacctcagctgtgggctttc
ttccaagacagcgtacagatgaatattatcagagacacgctggcaaaccccacggtgatg
aactttgtggaccagaacctggaagatgccaacatgaccaccagagacatcctcaacttc
ctgtacagtggccccgaagagcggcgagaggcggggatgcccagcttcgactggaggaac
atccttaacgttaccgaccagctcatacggactgtcaaccagtacgctgagtgcatcagc
ctgaacaagtttgtggcctacacggatgagtcacagatgatccaccaagccttatacctg
ctagaggagaataagttctgggccggcgtggtcttcaccgacatgtacccttggaccacc
agcgtcccaccgcatgtcaagtataagatccgcatggacatcgatgctgtggaacgcacc
aacaagatcaaagacaggtactgggacccaggcccaagggcggaccctgtggacgatcag
aggtatatctgggggggcttcgcctacctccaggacatgatcgaacacggcattatcaaa
gtgcagactggacacgattggccactcggggtctacgtgcagcagatgccctacccctgc
tacgtggatgatctcttcatgatcacactgaaccgctgcttcccgatgttcatggtgctg
gcgtggatctactccgtttccatgacggtgaagagcgttgtcttggagaaggagctgcgc
ctcaaggagaccctcaaggcaatgggtgtggccaatggcgtcctctggtgcacgtggttc
attgacagcttcgttaccatggcggccagcgcagcattgctcacttgcatcattgtgggc
ggcaaggtgttgaactatagcgatccgttgctggtgtacgtctttctgctgacgttcacg
gtggccaccatcatgcagtgtttcctgatgagcgttttcttcagcaaggcaaacctcgcg
gcggcatgtagcggcgtgctctacttcaccctctacctgccgcacgtgctctgcttcgcc
tggcaagaccgcctcacctccaacatgaagatggccgccagcttcctgtctccggtggcg
tttggcttcgggacggagtacctgtcgcgatacgaggagcagggtgtgggcctgcaatgg
gataacatccagaccagtccactagagaaggacacctactctttcctcacctccgtcctc
atgatggccgtggatgccacgctctatggcgtcctggcctggtacctggacaacgtcttt
ccaggtcagtatgggatcggtcggccattttacttccccctgcagccttcctactggcac
aaagcttcgcctgcacctcctgcaacagatgaaccagtcgctccggaagtggaaaaggcg
gagaaggaccccgaaagtggcggcggtcccaccgacaccgtcaacaactgcaacggttcg
accagcaggaaaacctgcaagcaccaaagcaagcgggagcgtctggagcgggagaaagag
tggctcaggcggcaggaggaggacaacaaggaggaagacaaagaaaacgaggggcaagaa
ggcgtgctgctgttcgagtccgatccagtgaatctggagctgggggtgcgcatccggggg
ctggtcaaggtgttcccgggaggctcccgtcccgccgtggaccgcctcagcctcaacttc
tacgagggtcagatcacgtccttcctgggccacaacggcgctgggaagaccaccaccatg
tccatcctgaccggcctcttcccgcccacgtccggctccgcttacatctacggaaaggac
attcgcaccgaaatggacgccgtgcgatcttcccttgggatgtgtccgcagtacaacatc
ctcttcaatcatctaacggtggaggagcacatcctgttctactcgctgctgaagggtcgc
acgccggccgaggcccgaatggaggtcgaggacatgctgcaggacttgggcctgcctcac
aagcgagacgacgaggcccagaacctctcaggtggcatgcagaggaagctgtcggtggcg
atggcgttcgtcggcggctccaaggtggtcatcctggatgagcccacttccggcgtggac
ccttactccaggagatctatttgggatctcctgttgaaatatcgatccggtcgcacggtg
atcctgtccacgcaccacatggacgaggccgacatgctgagcgaccgcatcgccatcatc
tccaagggtcggctgcactgctgcggctcgccgctcttcctcaagaactgcttcggcgcc
ggcttctacctgacgctggtgcgccggataaaagacgtcaagaacaaggagaacgactgt
gactgcgcctctgactgttcctgctcctgctcgatttgcacaagatacaaggatcagtcc
cagaacctgtgccagaacgccgaacgggtcttagagggggacctggaaagcatcagcggc
ctggtccaccaccacgtccccgaggccaagctgatcgaggccatcggtcaggagctcacc
ttcctgctccccagtcgaggcttcaagcaccgcgcctacgccagcctcttcagggagctg
gaggagaccctcgctgacgtgggcctgagcagtttcggcatctccgacacgtccctggag
gagatcttcctaaaggtgacagcagatggcgaggcagcagcgctcaacgcagcccccgct
ggaagctacgacgccgcggaagctaacggcgtcacaatgcacgtcgcgtcggactgcagc
gctggcaaaggctccaggcaggtgaaaggcgcgcggctggtcctgaagcagtttcacgcc
ctgctcgtcaagcggttccatcatgccacccgcagccgtaaagacttcgtggcgcagatc
gtcctgcctgccagctttgtcctggtcgccctcgtcttcaccaccattcttccgccgttt
ggagagtacccaagcctgacgttgaccccctggatgtacggcccgcagatcaccttcttc
agtaacgagcaaccttcggacccggcgatgagggacttcgccgagcgattcctaaggcga
ccgggtatcgggacccgctgcatgcagggggacccactggggatgccttgcagcgacgag
gcgtcggagtggcggcgtcccgacgtcgacggcgcgacggccgacgtcctggagagtccc
gagtggaacgagcggaacccgtcgccctcctgccagtgcagcagcagcggaaagctgacc
atgatgcccgtctgtcccgccggggccggaggccccccgccgccggagcgcctggaagcc
accggggacaccatgatggatctgagcgagcgcaacatctctgacttcctggtcaaaacc
tacccgagtctcatcagaaaaggtctgaagagcaaatattgggtcaatgaacaaaggtac
ggcggtctgtctgtcggaggacacctgcccatcctggacttggagccgaaagacatcgag
aacgttttccgtcaacttggacgaatgctcaacgtcaccgggggtcaacattccgcggtg
gcactgcgggagttcggacctttcttgcgatacatggagagtgaatttaacgtcaaggtt
tggtacaacaacaaaggctggcacgccatggtggccttcatgaacgtggccaacaacgcc
atcatgcgagcttacctgcccaccagtgccaagcccgtcgagttcggcatcaccgcgatc
aaccacccgctcaacctcaccaaggagcagctctccgaggtcaccgtgttgactacgtct
gtgaacgcagtggtcgccatctgcgtgatcttcgctatgtccttcatcccggctagcttt
gtcctctacctcatccaggagcgcgccaccaaagccaagcacctgcagtttgtcagcggc
gtcagccctttcatctactggctggccaacttcttctgggacatggtgaactactccatc
agtgctgctatggtggtcggcattttcgtggcttttgacaaaaagtgttacacgtccccg
tccaacctgcctgcgctcttagcgcttcttctgctctatgggtggtctgtgacccccatg
atgtaccccatgtcgtacctgttcgacgttccgagcaccgcctacgtgtcgctctcgtgc
atcaacctgttcatcggcatcaacagcagcgccgtcaccttcgtcctggagctctttgac
aacaaccggtcattgctgatgttcaacgagtggctgaagaaaggcctgctggtcttccct
cacttctgtctgggccgcggcctcatcgacatggccatgaaccaggcggtcaccgacgtc
tacgcccgcttcggcgaggagcatgcggacaacgcgttccggtgggacttcgtggggcgg
aacgtttgcttcatggcggcggaaggtttcgtctactttgcgctcaacctcctgatccag
taccgcttcttcctcgaccgctgtcgcagcttatcggacggcaagcggcttccgccggcg
gacgaggacgacgacgtggcccgcgagcgacgtagagtctacgacggcggcagcaagtcg
gacgtcctgcaaatccaagacctctccaagacctacgtgggcaggaagagggcggcggtg
gacgggatctgcgtaggcgttcctgccggggagtgttttggacttttaggcgtcaacggc
gctggcaagacgaccaccttcaaaatgttgacgggcgacacggacgtcagctcgggggac
gccagcgtggttggttacagcatcctgaaggagattctggacgtgcaccagaacatgggc
tactgcccacagttcgacgccattgacgggctgctgacgggcagggagcacctgtacctg
tacgcccgcctccggggggtgcccgaggacgagatccccagggtggccgagtggggcatc
gagaaattgggcttgtcggagtacgccggccgctgcgccggcacctacagcggtggcaac
aaacgcaaactctccaccgccatcgccatgatcggttgcccggcgctggtcctgttggat
gagcccaccacggggatggacccgcattcccgccgcttcctgtggaacgccatcctgagc
gtcatccgggacgggcgggccgtggtgctgacgtcgcacagcatggaggagtgcgaagct
ctgtgcacgcgactcgccatcatggtcaacggcaccttcaagtgcttgggaaccatccag
cacctcaaatacaaattcggggacggctacgtgctgagcgtgaagatggcgcccggcaaa
gctgggtcgccccccgacctggcgcccgtggaggcgttcatggagagcagcttcccggcg
tgcgtgcggcgcgagaagcactacaacaccctccagtatcacatcgccgccgcgtcgctg
gccaggatcttccagctgctcgtctccaacaaggacaggctgtgcatccaagactactcg
gtcacgcagaccaccttagaccaggtgttcgtcaatttcgccaagcagcagacggccgag
gacgacgcggtcacgtcgcagcgccgcggacgcaaggatgtcaaaatcgtgcccataaag
aggaaaagctgcaagtga
DBGET
integrated database retrieval system
