Syngnathoides biaculeatus (alligator pipefish): 133510443
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Entry
133510443 CDS
T09681
Symbol
acin1a
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03013
Nucleocytoplasmic transport
sbia03015
mRNA surveillance pathway
sbia03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133510443 (acin1a)
09122 Translation
03013 Nucleocytoplasmic transport
133510443 (acin1a)
03015 mRNA surveillance pathway
133510443 (acin1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133510443 (acin1a)
03041 Spliceosome [BR:
sbia03041
]
133510443 (acin1a)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133510443 (acin1a)
Spliceosome [BR:
sbia03041
]
Complex C
Other components
EJC/TREX
133510443 (acin1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_ACIN1
RSB_motif
SAP
AJM1_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
133510443
NCBI-ProteinID:
XP_061694323
LinkDB
All DBs
Position
13:complement(19189643..19225351)
Genome browser
AA seq
1893 aa
AA seq
DB search
MEEVDGIYVGRRRALLDVLAGNGPEERKMADLEDVTLDGRPLQSLRVADLKAALEERGLS
KSGQKNALVKRLKGALMLENLQKTTPHVGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQR
QEKEAREAHDTNEQEDHTDSINNTIACPPQAQDVTPSSADQHKPPGPSDGGILFAAVHEG
EVNSNQEAHMSAPPTSVSVTMHVPGSEHQPEKSAAASACPVDSDDDDSEDGEEDGDDDDD
WGSNIRRRTQRQTARGPSTRERCGASRQPQQQHHIPPLLSPQLRQPTPPPSPPPELSFPL
PDTPKQSPPSPDVAPAGHSPSTSTSGSSSSDSRSSSPEPQRSGFVERKPGPLTLLARKME
SEGAFSRAGWHGDNGEGGRKDSRSPIASSFCDTDHPKGLSSAAGHVPVSMKPGINQEVSG
THSAHSHVPVSVLKTLTMEERESELQSEKTLELQRQERVRSLDQERALEEERIKTLEREQ
KEIERCEPQQALEREQQEPFQFENKLALERGRLEREQALAKEQEEHEQTLVKERALELER
QRELERQRLLEQEHLQQEREEREKKEREIELERLQALEREREEWEKAIEKERLEREKALE
EERKEKEQIEREKVLEEERLEREKLEQERLEREKQERLAREKIEQERLARVKIEQQRVER
EKALEAERKENERIERGKALEQERLEKEKLERERIEREKSLEQERLAREAALKERQEREN
ALEKERHEREEALEREQREREEAVEREQQEREEALKREQQEREKALELERLERESVLELE
RLERERALELERLERERALELERLEKEKALELERLEKEKALEQELLEKEKALEQERLEKQ
KVLEQEKAIELEGIEKQRALEQERLEQERLERERVVQERLEKECLERARVERECFEKECL
ERARQEQERLEKEHVEKACLEQERTEKDHLERACIVEERLEKEHLETTHAQQVQQRLESV
RAEEEEKLELDRKGQNREMLVAALENKRIEEKIAMERGSEQEILQKKTAKALDTKLLPAK
LGSELGLTPSTPPLSTGPDIKTETGVQEYAKAPMPQNETQATESRSSLSSPQSSLKKFRF
LIDRPNRAQSTTSMDINWPHTFSDTHQPQVSLFSSSTSFGEQEEGKTIAKQEGHVRQEVG
AKTLDQVGSHSEEASAFNKKTNSKESFTNQVLKHNVKGDSVIHDEPAKVAKETTKKLKDV
GNERLPSNPVNDVQWQARDGKREEKKTRKHSSSDSSSSESDTGSSSSRSSSSSSSSLENI
STSRNKRGVKLDINASPQCRVTAVAHDASIKPSPYKRERSVEKTSTADDEASQAKKPFLE
TPPGEMKKKDNEGLEEKDEKRQEIESAMADSEKIVEAGDEAQKTCVARRISLSSSKSSSG
TGSTDDQESGSAGGRKRRWGSSSVVTAKKPSISITTDSLKSLIPDIKPCAGQDEVLDLHP
EEVVLSGAEDEDHVHSEQDLQIRRTVTQVVSSDSQENGEKETKRRRCEEGMEDSDIQTDQ
NRKEPVEEKPVEEMETQSTPHPSQDVELSTVAPANVIIRPSISQQKTGVSITIDDPVRTT
RQPSPARGKISNIVHVSNLVRPFTLGQLKELLGRTGTLVEDAFWIDKIKSHCYVTYSSSE
EAVATREALHGVKWPQSNPKVLNVDFCQQDELDFHKGLGTAGKPGTEEQWHASNRFQAPG
LPSLLPKQDQWAEREREMERREKARSEREWDRDKVRDFGKVGNDVEGGARRSRSRERRRK
ERGKSKEKKTEKKEKAAEEPPAKLLDDLFRKTKAVPCIYWLPLTDEQFVEREAARAERMK
EREKRLKQQQQEEEEKKREEERKERIKGGGVTAGDRSEGAKDKERDRERDRDRGKDRERN
TDKRRDGYRRPGASGEGGSRRSRSRSDPRDRRR
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagttgacggcatttacgtcggccgtaggagggcgttgctcgacgttctcgct
ggaaacgggccagaggaacggaaaatggcggacctcgaagacgtaaccctggacgggaga
ccgctccagtctcttcgcgtcgcagacttaaaagctgctcttgaggaaaggggactatcg
aaaagcggacaaaagaatgccctcgtcaaaagactcaaaggggctcttatgctggagaat
ctgcagaagaccactcctcatgttggactgcaaccaaactctcagattggtgaggaaatg
agccagaatagcttcattaagcaatatctggccaaacagcaagagctcctgcgccaacgt
caggagaaagaggcacgggaagcacatgacactaatgagcaagaggaccacacggacagc
attaataacaccattgcatgtcctccgcaagcccaggatgtgaccccatcctctgctgac
cagcacaagccacctggcccctctgatggagggatcctgtttgctgcagtacacgaggga
gaagttaatagcaaccaggaagctcacatgtccgctcctcctacttctgtatcagttaca
atgcatgtccctggcagtgagcatcaaccggagaagagtgctgcagccagtgcctgccca
gttgacagtgacgatgatgatagtgaggacggtgaggaggatggtgatgatgatgatgac
tggggcagtaatattcgcaggagaactcaaagacagacagccagaggaccctcaactcgg
gagaggtgtggagcatctcgtcaaccccagcaacagcaccacatccctccccttttgtct
cctcaactccgccaaccaacgcctcctccctccccacctccagagttatcgttccctttg
cctgacaccccgaaacagagccccccgagtccagatgtagctccagcagggcactcgccc
agtacctccacctctggttcctccagcagtgatagccgcagtagcagcccagagccacaa
aggagtggatttgtggagcgtaaacctggcccattaacgctactggcccgtaaaatggaa
tcagagggtgccttctctcgggccggttggcatggtgacaatggggaaggtggtaggaaa
gacagccgttccccaatagcctcatcattttgcgacacagatcatcctaagggtctctca
tcagctgcaggccatgtgcctgtttctatgaagccaggcatcaaccaggaagtcagtgga
acacattcagctcatagtcatgttcctgtgagtgtgcttaagactttgacaatggaagaa
agagaatctgaactacagtcagaaaagacccttgagctgcaaagacaagaaagggtaaga
agccttgatcaagaacgagcgttggaggaagagcggataaaaactcttgagcgagaacaa
aaggaaattgagagatgtgagcctcagcaggccttagaaagagagcaacaagaacctttt
cagtttgaaaataaacttgctttagaaagagggaggttggagagggaacaagctttggcc
aaggagcaggaagagcatgaacaaaccttggtaaaagagagagctctagagctggagagg
caaagggaacttgaaaggcaaaggctcctagagcaagaacatctccagcaagaaagagaa
gagagggaaaagaaagagagagaaatagagttagaaagactccaggctttggaacgggaa
cgagaggaatgggaaaaggctattgaaaaagagaggttagaaagagaaaaagctttggag
gaagaaagaaaagaaaaagaacagattgaaagagaaaaggtattggaagaggaacggttg
gaaagggaaaaattagagcaagagaggctagagagggaaaagcaagagaggttagcaaga
gaaaaaatagagcaagagaggttagcgagagtaaaaatagagcaacagcgagtcgaaagg
gaaaaagctttagaggcagagagaaaagaaaatgaaaggattgaaaggggaaaggcattg
gaacaggaacgtttggaaaaggaaaaattagagcgcgagcggatagagagagagaaatcc
ttagaacaagagcgtctagcaagggaagcagccttgaaagaacggcaagagcgggaaaat
gcgttggaaaaagaacggcatgagcgggaagaagcattagagagagagcaacgagagagg
gaagaagccgtggagagagagcaacaggagagagaggaagccttgaagagagaacagcag
gaacgagagaaagctttggaactagaacgactagagagggaaagtgtcttagagcttgag
cgactagagagggagagagccttagagcttgagcgactagagagggagagagccttggag
cttgagcgtctggaaaaagaaaaagccctagagcttgagcgtctggaaaaagaaaaagcc
ttagagcaagaactactagaaaaagaaaaagccttagagcaagagcgactagaaaaacaa
aaagtcttagagcaggagaaggccatagaacttgagggtattgaaaaacagagagcccta
gagcaagaacgtctggaacaagagcgtcttgagagagagcgtgtagtgcaagaacgcctg
gagaaagagtgtcttgagcgagcacgtgtagagagagaatgctttgagaaagagtgtctt
gagagagcacgtcaagagcaagaacggctggagaaagagcacgttgagaaagcatgttta
gaacaagaacgcacggagaaagaccatctagagagagcatgtatagtggaagaacgactg
gaaaaagagcacctggaaaccacacacgcacagcaagtccaacaaaggttggagagtgtt
agagctgaggaggaagaaaagctagaacttgacaggaagggacaaaatagggagatgtta
gttgcagctcttgaaaacaagaggattgaggagaaaatagcaatggaaaggggtagtgaa
caggaaattttacaaaagaaaacagctaaggcgttagacactaaactcctaccagctaaa
ttaggtagtgagcttggtcttaccccttccactcctcccctttccacaggaccagatata
aaaacggagacaggagtccaggaatatgccaaggccccaatgccacaaaatgaaacccaa
gcaacagaatcaaggtcatcactgtcatctccgcagtcatcattgaagaaattccggttc
ttgattgaccgcccaaatcgggctcagtctaccacatccatggacatcaattggcctcat
accttctcggatacacaccagccccaggtgtcacttttctcttcctcaaccagttttgga
gaacaggaggaaggtaaaacaattgctaaacaggaaggccatgtaagacaggaagttggt
gccaaaacactggatcaggtgggcagccattctgaggaagcgtctgcttttaataaaaaa
acaaattctaaagaaagtttcacaaatcaagtattaaaacacaatgtgaaaggcgattca
gtgatccatgatgagcctgccaaggttgccaaggaaaccaccaagaaattgaaagatgta
ggtaacgagagacttccttcaaaccctgtaaatgatgtacagtggcaggcaagagatgga
aagagggaagagaaaaaaacaagaaaacattcatcctctgactcctcttcctctgaatcc
gacactgggtcctcgtcatcccggtcttcttcctcatcttcctcttcccttgagaatata
tcaacttcaagaaataaaaggggagtaaaacttgacatcaatgcttcaccacagtgtaga
gtgactgctgtggctcatgatgccagtataaagccctccccttacaaaagagagagatcg
gtcgagaagaccagcacagcagatgatgaggcgagtcaggcaaagaaaccatttcttgaa
acaccacctggagagatgaaaaagaaagacaacgaaggattggaggaaaaggatgaaaaa
agacaggagattgagtctgctatggccgattcagagaagattgtggaggctggcgatgag
gcacaaaagacctgcgtagctcgtaggatctctcttagcagcagtaagtcctcttcaggc
acaggcagcacagatgatcaggaatctgggtctgcaggtggtcgcaagaggaggtggggt
tcaagcagtgtggtcactgccaagaaaccttccatcagcatcaccacagattcactgaag
tcgctaatcccagacatcaagccgtgcgcaggtcaagatgaggttctggacctgcacccc
gaggaagttgttctctctggtgctgaggatgaagatcatgtgcactccgagcaagacctt
cagatccggcgcactgtcacccaagtggtttcctcagacagccaagaaaatggagagaag
gagacaaaaaggagaagatgtgaggagggcatggaggatagtgacattcagacagaccaa
aatagaaaggaaccagtggaagagaagcctgtggaagaaatggaaacccaatcaacaccc
catcccagccaagatgtcgaactcagcactgtggccccagccaacgtcatcattcgtccc
tccattagtcagcaaaaaacgggcgtctccatcaccattgatgaccccgtgcgcaccact
cgacaaccgtcccctgcacggggcaaaatttccaacattgttcacgtcagcaatctggtg
aggccgtttactctcgggcaactgaaagaattgttgggcagaactggcaccctggtggag
gacgccttctggattgacaaaatcaaatctcactgctacgtcacttactcaagttccgag
gaggcggttgctacgcgggaagctctgcacggagtcaagtggcctcagagtaacccaaaa
gttcttaacgtagacttttgccagcaggatgagctggacttccacaaaggattgggcaca
gcgggaaaacctggaacagaagagcaatggcatgcatcaaaccgttttcaagcaccaggc
ctgccttccctccttcccaagcaagaccagtgggccgaacgggaacgggaaatggagcgc
agggagaaggcgcgctccgagcgggagtgggatcgcgacaaagtccgggactttggcaaa
gttggaaatgatgtggagggaggtgcccggaggtcacgctccagggagcgacggcgcaag
gagaggggaaagagcaaagagaagaagactgaaaagaaagaaaaagctgctgaagaaccg
cctgcaaagcttcttgatgacctgtttcgcaaaactaaagcagttccttgcatctactgg
cttccacttacagatgaacagtttgtcgagagggaagctgccagagcagaacggatgaag
gaacgtgagaaacgtctgaaacagcagcagcaggaggaggaggagaaaaagagggaagaa
gagcgaaaggagagaatcaaaggtggaggagttacagcaggagaccggagcgagggggca
aaggacaaagagcgcgacagagagcgtgacagggaccgaggtaaagacagggagaggaac
accgacaaacgcagggatggctaccgaaggccgggggctagcggggaagggggcagcaga
cgctcccgaagccgcagcgacccgcgagacagacggcgctaa
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integrated database retrieval system
