Syngnathoides biaculeatus (alligator pipefish): 133510506
Help
Entry
133510506 CDS
T09681
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04145
Phagosome
sbia04814
Motor proteins
sbia05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133510506
09142 Cell motility
04814 Motor proteins
133510506
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133510506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133510506
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbia04812
]
133510506
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
133510506
Cytoskeleton proteins [BR:
sbia04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
133510506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
133510506
NCBI-ProteinID:
XP_061694466
LinkDB
All DBs
Position
13:complement(12437121..12456337)
Genome browser
AA seq
685 aa
AA seq
DB search
MVAVNLGLLHSQRRRRQQARRGGVFHTSFQHHHRPSLPFRNNTNQSKPGCFVTRLFDLDV
SMSDKSELKAELERKKQRIAQIREEKKRKEEEKKKKDGDSKRAVDAGAEDSDLEKKRKEA
EALLQSVGITPDIQHATAQPLRVVTEDTCLFHYLVPAPMSPSNKSVASDAGSQDSGDGNA
GPRRGAVRLGMSKITQVDIIPKEMVSYSKETQTPTEAHTDQKADEDEDDEITAPSPTEDA
HEAKEDQDDQHEEDTPKELTEEEKLQVLHSEDFLAFFERGSRIVERALSEQVDVCFDYSG
RDLEDKEGDLQAGAKLVLNRQFADERWTKNRVVTCLDWSPQYPELLVASYNNNEDSPHEP
DGVALVWNQKYKKSTPEYIFHCQSEVMSAGFAKFHPNLVVGGTYSGQIVLWDNRSNKRTP
VQRTPLSAAAHTHPVYCVNVVGTQNANNLISISTDGKLCSWSLDMLSQPQDSLELVFKQS
KSVAVTSMAFPLGDVNNFIVGSEDGSVYTACRHGSKAGITEVFEGHHGPVTGLSYHTAGG
PVDFSHLFISSSFDWTVKLWSTKSTRPLYSFEDCCDYVYDAMWSPTHPALFACVDLAGRL
DLWNLNNDTEVPTASVYVEGAPALNCVRWAPSGKEIATGDSEGQVQVYDVGEQICVPKAD
EWTRFVRTLADINESRDEAEELANV
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggtcaatcttggtttgcttcattcccagcgtcgacgaagacagcaggcgagg
cggggtggtgtcttccacaccagcttccagcatcatcaccgcccatcactgcctttcagg
aataacaccaaccaaagcaaaccgggctgctttgtcaccagactctttgacttggacgtc
agtatgtctgacaagagtgagctgaaggccgagcttgagagaaagaaacagcgtatcgcc
cagattcgagaggagaagaagagaaaagaagaggagaagaagaagaaggatggagactcc
aagcgtgctgtggatgcaggcgccgaagactcggacctggagaagaaaaggaaggaggct
gaggctttgctgcagagtgttggcatcaccccagacatacaacacgccacagctcaaccc
ctgagggtagtaacagaggatacctgtctatttcactacctagtccccgcccccatgtct
ccctccaacaaatcagtggccagcgacgcgggaagccaggattctggggatggaaacgca
ggacccaggcgcggggctgtgaggctcggcatgtccaaaataacccaagtggacattatc
cccaaagaaatggtgtcctactcaaaagaaacccagacccctactgaagcgcacactgat
caaaaagcagatgaggatgaggatgatgagataactgcaccctctccaacagaggacgct
cacgaggcaaaggaagaccaggatgaccaacatgaggaagacacccccaaagaactgaca
gaagaagagaagctgcaggtcctgcactccgaggacttcctggcatttttcgagcgaggc
agcaggattgtggagcgagcgttgtccgagcaggtggacgtctgctttgactacagcggg
cgagatttggaggacaaggagggggacctgcaggctggcgccaagctggttctgaacaga
cagtttgctgatgaacgctggaccaaaaacagagtggtcacttgtctggactggtcccct
cagtaccccgagctacttgtggcctcctacaacaacaatgaggactctcctcacgaacct
gatggagttgcactggtctggaaccagaaatataagaagagcacacctgagtacatattc
cactgccagtcagaggtgatgtcagctggctttgcgaagtttcaccccaatctggtggtg
ggtggcacctactcgggacagattgtcttatgggacaaccgcagcaacaagcgaacccct
gtccagagaaccccgctgtctgctgctgcacacactcacccagtctactgtgtgaacgtg
gtgggaacccagaacgccaacaacctgatcagcatttctacagatggcaagctgtgctcg
tggagcctggacatgttgtcacagccacaggacagtttggaactggtgttcaagcagagc
aagtcagtggctgtgacctccatggccttcccgctaggtgatgtgaacaacttcatagta
gggagcgaggacgggtcagtctataccgcctgtcgccatgggagtaaggcgggcatcact
gaggtgttcgaaggccaccacggtccagtgacgggcctgagctatcacaccgcaggagga
ccggtggacttctcccatctattcatctcctcttctttcgactggaccgtcaaactctgg
agcaccaaaagcacacgcccgctgtactcgtttgaggattgctgcgactacgtgtacgat
gccatgtggtctccaacgcatcctgcactctttgcttgtgtggaccttgctggacgtctg
gacctgtggaacctcaacaatgacacggaggttcccactgccagcgtgtatgtggaaggt
gctccggcgctgaactgtgtgcggtgggctccctccggaaaagagatcgccacaggagac
tctgagggacaagtgcaggtgtacgacgtgggcgagcaaatctgcgtgcccaaggctgac
gaatggactcgtttcgtcaggactctggccgacattaacgagagcagagacgaagctgag
gagctggccaacgtttga
DBGET
integrated database retrieval system
