Syngnathoides biaculeatus (alligator pipefish): 133510517
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Entry
133510517 CDS
T09681
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin) isoform X1
KO
K24495
myomesin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133510517 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
133510517 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
133510517 (myom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
C2-set_2
Ig_CD22
CRLF2-like_D2
C2-set_3
HmuY
B-CoV_A_NSP1
Motif
Other DBs
NCBI-GeneID:
133510517
NCBI-ProteinID:
XP_061694496
LinkDB
All DBs
Position
13:5255478..5288199
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AA seq
1530 aa
AA seq
DB search
MSESVQVSQKELQLQHQKELHHHHRRHYHHHHHRHHREQRQQHHYESSSHLSTKSSVSKQ
SSSTSKTTTRRVKTSVKTEETGLERVVKSLSPLPKRAKRTYLATDLDKEVIGYVIPIFRA
NHEEVRALMEAREEDVTEEGINYVAMRNLFVREAREAMGVKVEKKTRTTRIRESTQRMEL
NRTLDEWTEFRKKMNPDSLMHPPQMTTKPRGQTVWEGQTIRLHCTVAGWPRPRIAWYKNN
VLIDAKTRPEKYTVESNYNMHYLEIKNCDFLDTAAYRASALNVKGEMSCVATVVVKRFQD
EERGLIVTKPRGFCSEHGVTFETTILDKFDVAFGREGETLSLGCTIIVYPTVKNYKPDVA
WYRNGVPLKASQWVHTQWAGQRATLTLIHLNKEDEGMYTMRVITKSGYDTYSAYVFVRDA
DVEVEGVPVAPLDVRCHDVNKDYVVVTWKQPAVEGSSPILGYYIDRCEVGTHHWAQCNDT
PVKYARFPVTGLVEGRSYVFRVTALNKAGVSRPSRISDVVVAMDPFDRARLLGPLAPWTG
MIKFTEEDHTAGVVPGEPTDIVVTEATKSYVVLAWKPPIQRGHEGVMYYIEKCISGSDTW
QRVNTSMPVKSPRFALFDLAEGKSYSFRVRCCNSAGVGEASEATGEITVGDVLELPSSPG
TPVATRNTGTSVVVSWGASKDVKNLVGYYIEYCVAGTDVWIPCNNKPINQTRFVCHGLTS
ETSCVFRVKAVNAAGYSLSSTASEPELVRAAISVPAAPTGVRLLEAHRDTMVIGWSEPDN
TGGADVRGYFVDYRTVKGHVVSKWHELNLQALTSTSYKVEDLKENVVYQFQVRATNMAGV
SDGSVPSAALECKEWTLTVPGPPVGLHVLEVRDSSAVVLWEPPSFDGRSPVNGYYLDVKE
ASAGEESWKAAHEKANKSTFMKVSGLQAATSYVFRVRAQNLAGVGNPSAVLGPILAESPP
GTREMYVDVDDDGVISMVFECPEMGEGCEFVWSKNYEAITDNSEVTIINEKGRSRAIFNN
PSLEDLGIFSCVVTNMEGISSSYEVTEEGLMRLLDISHDHKFPVIPFKNEMAMELQEKGR
VRLWTEVEKFTKDCQVEYVFNDVIVHPGEKYSMNFDKNTGIIEMFMDSLEVTDEGTFTFN
LVDGKAKGATSLVLIGEEFRELQKKSEFERAEWLRKQGPHFIKYLDFTVTPQCDVLLQCT
VGNMKADTEIIWYKNSISIGERDEAAKKLEKDDDVLTFNIGKWVVKQDEQAQSEGTNLPA
EDTSLLLPPRPKISKNDAGIYEVYLRDERGQDKSRFDMTNEGYHTVMNEVFRVIANSSSQ
IQVTSTEHGIILSSNVAYYHEDERVTWLHKDAKITTSERVKTGVTGEQLWLKINEPTEKD
KGRYTVDLFDGKDGVRRAFELSGQAWEEAFEEFQRLKAAAIAERNRARVIGGLPDVVAIQ
EGKSLNLTGNVWGDPTPEVNWTKNERELVTDERYVLKFEHGKYASIAIAAVTRADSGKYA
LVVRNKYGTEAGQFTVSVYNPEDDEKDEEK
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaatccgtgcaagtgtcacagaaggagctgcagctgcagcaccagaaggagctt
catcatcatcatcgccgtcactatcatcatcatcatcaccgtcatcatcgagagcagcgt
cagcagcatcactatgagagcagcagtcacttgagtaccaagtcctccgtcagcaagcaa
tcctcctccacttccaagaccaccactcgtcgcgtgaagacgtccgtgaagaccgaggag
acgggcctggagcgggtggtgaagtcgctgagtccgctacccaaacgggccaagcgcacc
tacctggccaccgacttggacaaggaggtcatcggctacgtgattccgattttcagagcc
aatcatgaagaggtgcgcgcactcatggaggcccgtgaggaagacgtgacggaggagggc
atcaactacgtggccatgaggaacctgttcgttcgcgaggccagagaggcgatgggggtc
aaggtggagaagaagaccaggaccacgcgcatccgagagtccacccagcgcatggagctg
aacaggaccttggacgaatggacagagttccgcaagaagatgaacccggatagcctgatg
caccccccgcagatgaccaccaagccccgtggacagaccgtgtgggaaggccagaccatc
aggctgcactgcacagtagctggatggcccagaccaaggattgcctggtacaaaaacaac
gtgctgatcgacgccaagacacgccccgagaagtacaccgtggagagcaattacaacatg
cactacctggagatcaaaaactgcgacttcctcgacacggccgcttatcgtgcgtccgcg
ctcaacgtaaaaggcgaaatgtcctgcgtggccaccgtggtggtcaaacgttttcaggat
gaggaacggggtctgattgtgaccaaacctcgcggcttctgctccgagcacggcgtcacg
ttcgagaccaccatcctggacaaattcgacgtggcgttcggtcgcgagggcgagacgctg
agcctgggctgcaccatcatcgtctatcccaccgtcaagaactacaagcccgacgtggcg
tggtacagaaacggtgtccccctgaaggcctcgcaatgggtgcacacccagtgggctgga
cagcgtgccaccctcaccctgatccacctcaacaaggaagacgagggcatgtacaccatg
cgtgtcatcaccaagtcgggatatgacacctactctgcatatgtgtttgtcagagatgct
gacgtggaggtggagggggtccctgtcgcccccctggatgtgcgctgccacgatgtcaac
aaagactacgtggtggtgacctggaagcagcctgccgtcgagggcagcagccccattctg
ggctattacatcgataggtgtgaggtgggaacgcaccactgggcgcagtgcaacgacacc
ccggtcaagtacgcccgcttccccgtcacgggcctggtggagggccgctcctacgtcttc
agggtgacggccctgaacaaggcgggggtgagccgcccgtcgcgtatctccgacgtcgtg
gtcgccatggatcccttcgacagggctcgcctcctcggacctttggccccttggaccggg
atgatcaagttcacggaggaggatcacactgctggagtcgtcccgggagaacccactgac
atcgtggttaccgaggcgaccaagagctacgtggtcctcgcctggaagccccccattcaa
aggggtcatgaaggagtgatgtattacatcgagaagtgcatttcaggctccgacacgtgg
cagagagtgaacacgagcatgcccgtcaagtctccccgcttcgccttgtttgatctggcc
gaaggtaaatcgtacagcttccgcgtgcgctgctgcaactcggcgggcgtgggcgaagcc
tcggaagccaccggcgagatcaccgtgggcgacgtgctcgagctgccttcgtccccgggc
acacccgtggccaccaggaacaccggcacctccgtggtggtctcctggggggcttccaag
gacgtcaagaacctggtgggctactacatagagtactgcgtggcgggcacagacgtctgg
atcccgtgcaacaacaagcccatcaaccagaccaggtttgtgtgtcacggcctcaccagc
gagacgtcgtgcgtgttccgagtgaaggcggtgaacgccgccgggtacagcctgagctcc
accgcttccgagccggagctggtgcgggcggccatttccgtccccgccgcgcccaccggc
gtgaggctgctggaggctcacagggacaccatggtgatcgggtggagcgagccggacaac
accggaggcgctgacgtccgaggatacttcgtggactacaggaccgtgaagggacacgtg
gtcagcaagtggcacgagctcaacctccaggccttgacctccacctcctacaaggtggag
gacctgaaggagaacgtggtctaccagttccaggtgcgcgccacgaacatggcaggcgtg
agcgacggctcggtgcccagcgcagctctggagtgcaaagagtggaccctgaccgtgcca
ggccctcctgtcggtcttcacgttctggaggtcagggactcctccgcggtggtcctgtgg
gagcccccttcgttcgacggccgctcccctgtcaacggctactatttggacgtcaaggag
gcgtcggccggggaggaaagctggaaggctgcccacgagaaggccaacaagtccacgttt
atgaaagtgagcgggctgcaggctgctacatcttacgtcttccgcgtgcgtgctcaaaac
ctcgcaggcgtcgggaatccctctgcggtcttgggtccaatcctcgcagagagtccgcct
ggcacaagggagatgtacgtggacgtggacgatgacggcgtgatctccatggtctttgag
tgccctgagatgggcgagggctgcgagtttgtctggtccaagaactacgaggccatcacg
gacaactccgaagtgacgatcatcaacgagaagggcaggtccagagctatctttaacaac
ccctccctggaggatctgggtattttctcctgcgtggtcaccaacatggaaggcatctca
tccagctacgaagtcaccgaggaaggtctgatgcgtctgctggacatcagccacgaccac
aagttccctgttattcccttcaagaacgaaatggccatggagctgcaagagaagggccgc
gtgcgcttgtggactgaggtggagaagttcaccaaagactgtcaagtggagtacgtcttt
aacgacgtcatcgttcacccgggagagaaatactccatgaacttcgacaagaacaccggc
atcatcgaaatgttcatggactccttggaagtcaccgacgagggcaccttcaccttcaat
ttggtggacggcaaagcaaagggcgccacgagcctggtgctcatcggagaagaattcagg
gagctgcagaagaaatcagagttcgagagagctgaatggctcaggaaacaaggtcctcac
tttatcaagtatctggacttcactgtcacgccccagtgtgacgtgctgctgcagtgcacg
gtaggaaacatgaaggcggatacggagatcatctggtacaagaacagcatctcgatcggc
gagcgcgacgaggccgccaagaagctggagaaggacgacgacgtgctgacctttaatatc
ggaaagtgggttgttaagcaagacgagcaggcacaaagtgaagggacaaatctgcctgct
gaggatacttcgctgctgctgccaccaagacccaaaatttccaagaatgacgcgggcatc
tacgaggtgtacctgagggacgagagaggccaagacaagagcaggttcgatatgactaat
gaaggctatcatactgtaatgaacgaggtcttcagagtgatcgccaactcgtcctctcaa
atccaagtcaccagcacggagcacggcatcatcctctcctccaacgtcgcgtactaccac
gaggacgagcgcgtcacttggctgcacaaggacgccaagatcaccacgtcggagcgagtg
aagacgggagtaacgggcgagcagctttggctcaagatcaacgagcccaccgagaaggac
aagggcaggtacaccgtcgacctgtttgacggcaaagacggcgtcaggcgtgcgtttgag
ctttctgggcaagcatgggaagaggcattcgaggaattccagaggctcaaggcggcagcc
atcgcagagagaaatcgcgctcgcgtcattggaggcctgccagacgtggttgcaatccaa
gagggcaagtctcttaacctgaccggcaacgtgtggggggaccccacgcccgaggtcaac
tggaccaagaacgagcgcgagctggtgaccgacgagcgctacgtgctcaagttcgagcac
ggcaagtacgccagcatcgccatcgccgccgtcacccgcgccgactcgggaaaatacgcg
ctggtggtgcgcaacaagtacggcacggaggccgggcagttcacggtcagcgtgtacaac
ccagaggacgacgaaaaggacgaggagaagtag
DBGET
integrated database retrieval system
