Syngnathoides biaculeatus (alligator pipefish): 133510544
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Entry
133510544 CDS
T09681
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133510544
Ion channels [BR:
sbia04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
133510544
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
133510544
NCBI-ProteinID:
XP_061694564
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All DBs
Position
13:11255870..11289962
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AA seq
1049 aa
AA seq
DB search
MKNFTPEGGAASSASRRHSSTKEPCLAHAEDAPASSRPTAASGATETRGPHPGDAARHGQ
SSKASGAEASDSEPAVVRDAADAATGDAGRNSVAPISSMKCNKNGECRRDSGTGSLRSII
SKQEKQTGGGSARAEDGGSAKRGACNSTSASMDGSITPGGSLAGGHAGEGATPVPEKKDP
KVSFSNAPSRKASSSLHGPGQTPQPRNSVTFQKPEDGPSIVAAEDAEARGSQASFMQRQF
SSMLQPGVNKFSLRMYGSQKAVEREQERVKSAGNWIIHPYSDFRFYWDFTMLLFMVGNLI
IIPVGITFFKEETTTPWIIFNVVSDTFFLMDLVLNFRTGIIIEDNSDIILDPETIKKKYL
KTWFIVDFISSIPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYI
HQWEEIFHMTYDLASAVMRIINLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSLNKMEN
DTWSELYSFAVFKAMSHMLCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQ
SLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEESILGELSEPLR
EEIVNFNCRKLVASMPLFANAEPNFVTAMLTKLHFEVFQPHDYIIREGTIGKKMYFIQHG
VCSVITKGTLAMKLSDGSYFGEICLLTRGRRTASVRAETYCRLYSLSVDHFNEVLEEYPM
MRRAFETVAIDRLDRIGKKNSILMHKVQHDLNSGVFNNRENEMIQEIVKYDREMVKLVDL
QRPRAMSMTPSIGGIFAPPGQSQTGSAIATLQQAVAMSFCPQMASPLVGPGTLQSPRMVR
RFQVMQNLQSPVSMSPLQSQPPQTFGGVFGSAISSPPVQSPLATSGRTFQYMASVGPSGS
QLSLVQHHVSSPTQTQQRPASHKSTHSLHTGSLSQDTRALSASQPSLPQEGGPQAASAVP
SPPPSTRTSNTSIGPPHPNVPGPSGVGRSGGTQQRVAFASITPPSGLAATGAGAGAAGSG
PPDSGVPKKDSIVSLPELDSARSRLSSNL
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaactttacgccagaagggggagccgcgtcctcggcttccagaaggcactccagc
accaaggagccctgccttgctcacgcagaggacgctcccgcatcctcgcggcccactgct
gcctccggagccacggagacccgcggacctcatccgggcgatgctgcccgccacggccag
agcagcaaagcatctggagcggaggcgtcggactcggaaccggccgtcgtgagagacgcc
gcggacgcggcaacgggtgatgcaggtcgcaacagcgtcgctcccatttccagcatgaaa
tgcaacaaaaacggagaatgcaggagggactcgggtaccgggagccttcgctcgatcatc
tccaagcaggagaagcagaccggcggcgggtcggcgagggccgaagacggagggagcgcc
aagcgcggagcgtgtaactcgaccagcgccagcatggacggctccatcacgccaggcggg
tccctcgccggggggcacgcaggcgagggcgctactcccgtgcccgagaaaaaggacccc
aaggtgtcattctccaacgcacccagccggaaagcctcgtcgtccctgcacgggccgggc
cagaccccgcagcccaggaactctgtcactttccagaagccggaggacggaccctcgatt
gtagccgccgaggatgcagaagcccgaggcagccaggccagcttcatgcagcggcagttc
agtagtatgctgcagccgggagtcaacaaattctccttacgcatgtacggcagccaaaag
gctgtggagcgagagcaggagagagtcaaatcggccgggaattggattatccacccttac
agtgatttcaggttctactgggatttcacaatgctgctgtttatggtgggcaacctgata
atcatccccgtaggcatcaccttcttcaaagaggagaccaccacgccctggatcattttc
aacgtggtctcggacactttcttcctcatggacctagtgctcaatttccgcacgggaatc
atcatcgaggacaattcagacatcattttggaccctgaaaccattaagaaaaagtaccta
aaaacgtggttcatagtagacttcatctcatccatccctgtggattacatattcctcata
gtggagaaagggattgattctgaagtgtacaagaccgctcgagccctgaggatcgtccgt
ttcaccaagatcctgagccttctgcggctgttgaggctctctagattaatacgctacata
caccaatgggaagagatcttccatatgacctacgacctggccagtgctgtgatgcggatc
atcaacctgattggcatgatgctgctgctgtgtcactgggacggctgcctccagttcctg
gttccaatgctgcaggacttcccctctgactgttgggtgtccctcaacaaaatggagaat
gatacttggtctgagctgtactctttcgccgtgttcaaggcaatgagccacatgctgtgc
atcggatacggccgccaagcccctgaaagtttgtcggatatctggctcaccatgctaagt
atgatcgtgggagcaacttgctacgctgtctttattggccacgccacagctctcatccaa
tccctggactcctccagacgccaatatcaagaaaagtacaaacaagtggagcagtacatg
tccttccacaaactgcctgccgacttccgtcagaagatccacgactattacgagcacaga
taccaaggcaagatgtttgatgaggagagcattctgggagagctcagcgagccgctccga
gaggaaattgtcaacttcaattgtcgcaagctggtggcctccatgcccctttttgccaac
gcagagccaaattttgtcacggctatgttgactaaactgcactttgaggtatttcagcca
catgattacatcatacgggagggcaccattggaaagaaaatgtacttcatccagcacggc
gtgtgcagtgtcatcactaaaggcacactcgctatgaaactctctgatggctcatatttt
ggagagatctgtctgttgacgaggggtcgacggacggccagcgtccgagcagagacgtac
tgtcgactctactctctatctgtcgaccacttcaacgaggtactggaagaatatcccatg
atgagacgagcctttgagacggtggctattgatcgtttggatcgtataggtaaaaagaat
tccatcctgatgcacaaggttcagcacgatctcaattctggtgtttttaacaaccgcgag
aacgagatgatccaagagatcgtcaaatacgaccgtgagatggtgaaactggtggacctg
cagaggccacgggcaatgtcgatgactccctccattggtggaatctttgctccccctggc
cagtcccagaccggttctgctattgccaccctccagcaggctgtcgccatgagcttctgc
cctcaaatggcaagtccgctagtgggcccagggactttacaatctcctcgtatggtgcga
aggtttcaggtgatgcagaacttacaaagcccagtttccatgtctcctcttcagtcacaa
cccccccagacattcggaggggtatttggatccgcaatctccagcccgcccgtccaaagc
cccttagccacttctggacggactttccagtacatggccagcgtgggcccctcagggtcc
cagttgtctttagtacagcaccatgtatccagtcccacacagacccagcagaggcctgcc
tcacacaagagcacccactcgcttcacacagggagcttgagccaggatacccgtgcactg
tctgcctcccagccttcactcccccaggagggagggccacaagctgcatctgcggtcccc
agtcctcctccctcgacccgcacctccaatacctccattggacccccacaccctaacgta
cctgggccctctggggtggggagatcaggaggcacacaacagagggtagcctttgcctcc
ataactcctcccagtggacttgctgcaacgggggcaggagcaggggctgctggatcagga
cctccagactctggcgttcccaagaaagattcaattgtcagccttccagagctagactct
gccagatcccggctgtcttccaacttgtga
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