Syngnathoides biaculeatus (alligator pipefish): 133510611
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Entry
133510611 CDS
T09681
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133510611
Spliceosome [BR:
sbia03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133510611
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_PARP14_3
RRM_ACIN1
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
133510611
NCBI-ProteinID:
XP_061694683
LinkDB
All DBs
Position
13:21654615..21726593
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AA seq
522 aa
AA seq
DB search
MDGDVAVGVKRGSDELSMYGSSPSSLTANGSDTKKQRLDESPPSRVLHIRKLPNEVSETE
VIALGLPFGKVTNILMLKGKNQAFLELSTAEAAITMVNYYAAVTPQVRNSPVFIQYSNHK
ELKTDSALNQRAQAVLQAVSAVQDGSSPSSDHGVLDLAPPPSPVLRIIIDNMFYPVTLDV
LQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLRIDFSK
LVNLNVKYNNDKSRDYTRPDLPTGDGDSSKDHSLLGTPSGALASYSSGAGYSSSLSLSQG
TGAVSPLSAAAAAAAAAGRVALSGSGVSGVLLASNLNEEMVTPQSLFTLFGVYGDVQRVK
ILYNKKDSALIQLSDSNQAQLAMSHLNGQKVFGKVMRVTLSKHQTVALPREGLDDQLLTK
DFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNIRDGIGEDDLRLLFSNGGGAVKAFKFFQ
DRKMALIQMSSVEEAIQALMDLHNYDMGGNHHLKVSFSKSTI
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgatgttgcggttggtgtaaagagaggctcagatgagctcagtatgtatgga
agcagccctagctcactgactgcaaatggcagtgacactaagaaacaacgtctggatgag
tcacctccttcaagagttcttcacattagaaagcttcccaatgaagtatcagagacagaa
gtcattgcactggggcttccctttggaaaagttactaatatactgatgctgaagggtaaa
aaccaggcatttctggagctcagtacagcagaagctgctattactatggtgaactactat
gcagctgttacaccacaggtcagaaatagtcccgtctttatccagtactcaaaccataag
gaactgaaaacagactctgcgctaaatcagagagcccaagcagtgcttcaggcagtctca
gccgttcaggatggaagttctccatcatctgatcatggggttctggaccttgctccacct
cccagtcctgtcctacgtattataatagacaacatgttttatcccgtgactctcgatgtt
ctgcaacagatattcagtaaatttgggactgtgatgaagataattactttcaccaagaac
aaccagtttcaagcactcctgcagttcagtgatcctgtcaatgcccaacaggctaaactg
tctcttgatggacagaacatctataattcatgctgtactttgaggatagatttcagtaaa
ctggtcaaccttaacgtcaaatacaacaatgataagagtcgggattacactcgaccagac
ctgcccactggcgatggcgattcaagcaaggatcattctttattgggtaccccatctgga
gcgctagcttcatactcaagtggggcaggttattcatcctctctctccctctcacagggt
acaggagctgttagccctctgagtgctgctgccgctgcagcagctgctgcgggacgtgtt
gctctgtcagggtctggagtttctggagtccttttagcatctaacctgaatgaagagatg
gtcacgcctcaaagtctctttaccctcttcggtgtctatggtgacgtgcagcgggtgaag
atcctctacaataagaaagacagtgctctgatccagttatcagatagtaaccaggctcag
ctggcaatgagccacctgaatggacagaaggtatttggtaaagtgatgagggtgacactc
tccaaacatcaaactgtggctctgcccagggaaggactagatgatcagctcttaactaaa
gatttttctggctctcctctacatcggttcaagaaaccaggatccaaaaacttccagaac
atctttcctccctctgcaacacttcatctctccaatatccgggatggcatcggagaagac
gacctgcgtctcctgttctccaatggcgggggagcagtcaaggcctttaaattcttccag
gaccgtaagatggccttgatccagatgtcatcagtagaagaggccatccaggcactcatg
gatcttcataattatgacatgggcgggaatcaccatctcaaagtttctttctccaagtcc
accatctaa
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