Syngnathoides biaculeatus (alligator pipefish): 133510656
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Entry
133510656 CDS
T09681
Symbol
ubtfl
Name
(RefSeq) upstream binding transcription factor, like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133510656 (ubtfl)
03021 Transcription machinery [BR:
sbia03021
]
133510656 (ubtfl)
Transcription factors [BR:
sbia03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
133510656 (ubtfl)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
133510656 (ubtfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
DUF4473
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
133510656
NCBI-ProteinID:
XP_061694816
LinkDB
All DBs
Position
13:complement(28168383..28179539)
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AA seq
689 aa
AA seq
DB search
MNGSGVSAPQSGRLKIIKDEWRQEDCLTLLERIRSLLPDGDAMKYKTTESHFDWDKVGFG
NFTGEMCRQKWSKVSTEVRKYRTMTELIMDAIDFVKNPYKGKKLKTHPDFPKKPLTPYFR
FFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYVAEFQREKEAFEKNMARFKH
EHPELIEASKKSDLPEKPKTPQQLWYNHEKKTYMKMHPQVSQKELKEVLRRQWSQLSDKK
RLKWISKALELQKDYEDSMRAYHEAHPDVANSDDHVRSVLTKAERQLKDKFDGRPTKPPP
NGYSLYCAELMVNMKDVPSTERMVLCSKRWKMMTQKEKDLFQRRCEQRKKQYDMDLHRFL
ESLPEEERDRVVSEEKLGGARVPAGAVSSPHRAKSPPIKDEAQPELWAPQGAKERRDPKK
SGKLPDSPKTAEEMWQHSVTADFLAKCRSDRRKAQAAMEDAWKAMEKKEKIPWIKKAAED
QKRYERELLDRRPSQKKAKFDGEPKKPPVSGYQMFSQELLTNGELNHFSLKERMVEIGKR
WHTLTASQKDAYKKHVDATQARYRVLLDAWLQALSPQDRAAYKEFSSSKRRSTSKAGGGP
APKMPATAKGKATASKAAPPAAAKRAMAYRAKQDVESDSDDDDKSDSSDSDDDDEEDEDT
SGSCDSEDDEHDDDEDEEQTSSDQSSDSD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcagcggcgtttctgcgcctcagagcggcagacttaagatcatcaaagacgag
tggcgtcaggaggactgtctgaccctgctggaacgaattcgcagcctgctgcccgacggc
gacgccatgaagtacaaaaccaccgagtcgcactttgactgggacaaagtcggcttcggg
aacttcacgggggaaatgtgtcggcagaagtggagcaaagtttccacggaggtgcgcaag
taccgaaccatgacggagctcatcatggacgccatcgactttgtgaaaaacccttacaaa
ggcaagaagctgaagacgcatcccgacttccccaagaagcccctgactccgtacttccgc
tttttcatggagaaacgagccaagtatgccaaaatccacccggagatgagcaacttggac
ctgaccaagattctgtccaagaagtacaaggagctgcccgacaagaagaagcaaaaatat
gtggccgagttccagagggagaaggaagcctttgagaagaacatggcccgattcaagcac
gagcaccccgagctgatagaggccagcaaaaagtcggacctgcccgaaaagcccaaaact
ccgcagcagctttggtacaaccacgagaagaaaacctacatgaagatgcacccgcaggtg
agtcagaaggagctgaaggaggttttgaggaggcaatggtcgcagctgtcagacaagaag
agactcaagtggatcagcaaagcgttggagctccagaaggactacgaggacagcatgcga
gcgtatcacgaagctcatccggacgtcgccaactcggacgatcacgtccgctccgtcctc
acaaaagccgaaaggcaactcaaggataaatttgacgggcggccgacgaaacctcctcct
aacggctactcactgtactgcgctgagctgatggtgaacatgaaggacgtcccgagtacg
gagcgaatggtgctgtgcagcaagcgctggaagatgatgacccagaaggagaaggacctg
tttcagaggcgctgcgagcagaggaagaagcagtacgacatggacctgcacaggtttctg
gagagtctcccggaagaggaacgagaccgagtcgtgagcgaggagaagctgggtggcgcc
cgggttccggcgggcgcagtctccagtccgcacagagccaagtcgccgcctatcaaggac
gaggcgcagcctgagctttgggcgccccagggcgccaaggagcgacgcgaccccaagaag
agcggcaagctccccgactcccccaaaacggccgaggagatgtggcagcacagcgtcacc
gccgacttcctcgccaaatgcagaagcgaccgcaggaaggcgcaagcggccatggaggac
gcgtggaaggccatggagaagaaggagaagattccctggatcaagaaggccgctgaggac
cagaagcgatacgagagggagctgctggaccggaggccgagtcagaagaaggccaagttc
gacggagaaccaaagaaacctccggtgagcggctaccagatgttctctcaggagctcctg
accaatggggagctgaaccacttcagcctgaaggagcgaatggtggagatcggcaaacgt
tggcacacgctgacggcgagccagaaggacgcctacaagaaacacgtggacgctacgcag
gcgcgataccgcgtgctgctggacgcctggcttcaggctttgtctccgcaggatcgtgca
gcctacaaggaattctcctcctcgaagcgccgtagtacgtcgaaagccgggggcggcccc
gcccccaaaatgccggcgacggccaagggcaaagcgacggcctccaaggcggcgcctcca
gcggcggccaaacgggcgatggcgtaccgggccaagcaggatgtggagtccgactctgac
gacgacgacaagagcgactcgtccgattccgacgatgacgacgaggaagacgaggacacc
tccggcagctgcgacagcgaagacgacgagcacgacgacgacgaggatgaagagcagacg
tcttccgaccaatccagtgactctgactag
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integrated database retrieval system
