Syngnathoides biaculeatus (alligator pipefish): 133510696
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Entry
133510696 CDS
T09681
Symbol
mib1
Name
(RefSeq) E3 ubiquitin-protein ligase mib1 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133510696 (mib1)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133510696 (mib1)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133510696 (mib1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
SH3_15
MIB_HERC2
Ank_4
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
zf-C3HC4_2
Prok-RING_4
Sina_RING
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
133510696
NCBI-ProteinID:
XP_061694908
LinkDB
All DBs
Position
13:4284660..4356335
Genome browser
AA seq
1044 aa
AA seq
DB search
MTTGRNNRAMMEGVGARVVRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDVRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTTCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFTGGRVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSAASPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGN
RNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANVVRSGEVAAGAEGGASQFLVGDLVQICYDIDRIKLLQKGHGEWAE
AMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVTKIAPSGSAVSNASGERLSQLLK
KLFETQESGDINEELVKAAANGDLAKVEDILKRPDVDVNGQCAGHTAMQAASQNGHVDVL
KLLLKHSVDLEAEDKDGDRAVHHAAFGDEGSVIEVLQRGGADLNARNKRRQTPLHIAVNK
GHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNAL
HHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGNASLD
IQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEALRHHTLFQLRQLQD
MQDVSKVEPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLTIRNKKGQSPLDLCP
DPSLCKALAKCHKEKSSGQVGTRSPSLNSNMESLEECMVCSDMKRDTLFGPCGHIATCSL
CSPRVKKCLICKDQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQCRA
VVERRTPFVLCCGGKGMEDDDDAADDDDDDDDVDDDDDDITGSSNSMAGGSQDLLQPNNL
ALSWSSGNIPALQRDKDNTNVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFMCGHGTC
QLCGDRMSECPICRKAIERRILLY
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccggcaggaacaaccgagccatgatggaaggagtcggagcgagggtggtccgg
ggacccgactggaagtggggcaagcaggacggcggagaggggcacgtcggcaccgtcagg
agttttgaaagtcccgaggaggtggtggtcgtctgggataacggcaccgctgccaactac
cgttgttctggagcctacgacgtgaggatattggacagtgctccgacaggcatcaagcac
gacggaacaatgtgtgacacctgccgtcagcagcccatcattggcattcgctggaaatgc
gctgagtgcaccaattacgacctctgcacaacctgttaccatggcgacaaacatcacctg
agacaccgcttctacaggatcaccaccccgggcagcgagagagtgctcctggagtcgaga
cgcaagtcgaagaaaatcactgccagagggatcttcactggcggccgggtagtgcgaggc
gtcgactggcagtgggaagaccaggatggaggcaacggaaggcgaggaaaggtgactgag
attcaggactggagcgcagccagccctcatagcgctgcctacgtactgtgggacaacggg
gccaagaacctttaccgtgtcggttttgaaggaatgtcggacctgaaatgcgttcaggac
gccaaaggaggttccttttatagagaccactgtcctgtgttgggcgagcagaatggcaac
aggaaccccggcggtcttcagatcggtgacctagtcaacatcgacttggacctggaaatc
gtccagtcgctgcagcacggccacggcggctggaccgacggcatgttcgagacgctcacc
accaccggcacggtgtgcggcatcgacgaagaccacgacatcgtggtgcagtaccccagc
gggaacaggtggacattcaaccccgccgtactaacgaaagccaacgtggtacgcagcggc
gaagtagccgctggggcggagggaggagcttcccagttcctggtgggcgacctggtccag
atttgctatgacattgaccgcatcaagctgctccaaaaaggccacggagaatgggctgag
gccatgcttcctaccctggggaaggtgggccgcgtgcagcagatctactccgacagcgac
ctgaaggtggaggtgtgcgggacgtcgtggacgtacaatcccgccgccgtcaccaaaatt
gctccctcgggctccgctgtcagcaatgcatccggagagcgtctctcccagctgctgaaa
aaactgtttgagacgcaggagtccggcgacatcaatgaggagctggtgaaggcggcggca
aatggagatctggcaaaggtggaagacattttgaagagacccgatgttgacgtgaacggc
cagtgtgctggacacacggccatgcaagcagccagccagaacggtcacgtggacgttctc
aagcttttgctcaaacatagtgttgatctcgaggcggaggacaaagacggggatcgggcg
gtgcaccacgctgccttcggtgacgagggctcagtcattgaggtgctgcaaaggggcggt
gccgacctgaacgctaggaacaagcgcaggcagacgccgttgcacatagctgtcaacaag
ggacacctgcaggtggtcaaaacgctgctggactttggctgccaccccagcctccaggat
tcagagggcgacacacccctgcacgatgccatcagcaagaagcgggacgacatgctgtcc
gtgctgctggaggcgggcgccgatgtcaccatcaccaacaacaacggcttcaatgccttg
caccacgccgctctgcgagggaacccaagtgcgatgcgtgtgctgctatccaagctgccc
aggccctggatcgtggatgagaaaaaggatgacggctacaccgccctgcacttggcggcc
ctcaacaaccacgtggaggtggcggagttgttggttcatcaggggaatgccagcttggac
atccagaacgtcaaccagcagacagccttacacctggcggttgagcgccagcacactcag
attgtcagactgctagtgcgagcagaggccaagctggatgtccaggacaaggatggggac
acaccgctccacgaggcactgcgacaccacacgttgttccagttgcggcaactacaggat
atgcaggacgtcagcaaagtggagccctgggagccctccaagaatacgttaattatgggc
ttgggcacccagggggcagagaagaagagcgcagcgtccatcgcttgcttcctggccgcc
aatggagccgacctgaccattcgtaacaaaaagggccagtcgcctctggatttgtgtcct
gaccccagcctctgcaaggcgctggccaaatgccacaaagagaagagcagcggccaagtg
ggcacgcgcagcccatctctgaacagcaacatggagtccttggaggagtgcatggtgtgc
tccgatatgaagagagacactctcttcggtccgtgcggccacatcgccacatgctccctc
tgctcgccgcgtgtcaagaagtgtctcatctgcaaagatcaggtccagtcacggaccaag
attgaggagtgcgtggtgtgctctgacaaaaaggcggctgtgttgttccagccctgcggc
cacatgtgcgcttgtgagaactgtgccagcctcatgaagaagtgcgtacagtgtcgggct
gtggtggagcgccgtacccccttcgtgctttgttgtggggggaaaggtatggaggatgat
gatgatgccgcagatgatgatgatgatgatgatgatgtggatgatgatgatgatgacatt
acagggagctcaaactctatggcagggggatcgcaggatcttctccagcccaacaatctg
gcactaagttggtctagcggcaacatccccgccctgcaaagggacaaggacaacaccaac
gtcaacgctgacgttcagaagctccagcagcagctccaggacatcaaggagcagacgatg
tgccctgtgtgtttggaccggctgaagaacatgatcttcatgtgcggccatggcacctgt
cagctgtgcggcgaccgcatgagcgagtgccccatctgccgcaaggccatcgagcgccgc
atccttctctattag
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integrated database retrieval system
