Syngnathoides biaculeatus (alligator pipefish): 133510739
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Entry
133510739 CDS
T09681
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133510739 (fubp1)
03041 Spliceosome [BR:
sbia03041
]
133510739 (fubp1)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
133510739 (fubp1)
Spliceosome [BR:
sbia03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133510739 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
133510739
NCBI-ProteinID:
XP_061695020
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All DBs
Position
13:8626050..8645909
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AA seq
684 aa
AA seq
DB search
MADYSSVAPPSSGGGGMNEAFKDALQRARQIAAKIGGDGVAAPPTSEFAYGGQKRPLEDA
GGYFPMPNLNIDQPETKKVATNDAFSAMGAMGGPPRSISEEFKVPDGMVGFIIGRGGEQI
SRLQQESGCKIQIAPDSGGMPDRSVTLTGGPDAIQTAKRLLTEIVEKGRPSPAFHHNDGP
GMTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGEPFK
VQQAKEMVMELIRDQIFREQRGEYGSRIGGGGGESLDVPVPRFAVGIVIGRNGEMIKKIQ
SDTGVRIQFKPDDGSAPDRIAQIMGPPDQAQHAAEIISDLLRSVQAGGPPGHGGGGGGGR
GRGRGQGNWNMGPPGGLQEFTFSVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPN
SDPNVKMFTVRGSPQQIDYARQLVEEKIGGPVTPMGGPHGPPGPHGGPGPHGPPGPPGPP
GAPMGPYNPGPYNQGPPGPHGPPAPYQPQGWGNGYPHWQQGQPDPNKAAADANAAAWAAY
YAQYGQQPQAPMTPTGGAPGSTQSNGQGDPQAAGQSGQADYTKAWEDYYKKMGQQSQQPQ
DYTKAWEEYYKKQGQAAPQAAAPAAAAAPTTQPGGQPDYSAAWAEYYRQQAAYYGTSNPQ
TMGAAPQAPQGLQGSSLSSSTLTS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcggactacagcagcgtggctccaccgtccagcggcggcggcggaatgaatgaggct
tttaaagacgctctccagcgcgcacggcagatcgcagcgaaaatcggcggggatggcgtt
gcggctcctccaacgagcgagttcgcctacggaggccagaaaaggcctttggaggacgct
ggtgggtattttcccatgcctaacctgaatatcgaccaacctgagacaaagaaagtggcg
actaatgatgctttttctgccatgggagcaatgggaggccccccaagatcaatttcggag
gaattcaaggttcccgatgggatggttggattcattatcggaagaggtggtgaacaaatc
tcacgtctgcagcaggaatctggctgcaaaatacagattgcacctgacagtggaggtatg
cctgatcggtcagtgacattgacaggagggcctgatgcaatccagacggcaaagaggctg
ctcacagagattgtcgagaagggacgcccatccccggcgttccatcataacgacggtcca
ggcatgactgttcaggagatcatggtccctgcctcgaaagctggcctcgtcatcggcaag
ggaggtgagaccatcaagagccttcaggaaagagctggagtgaagatggtcatgattcaa
gatggcccccaaaacacaggtgcagataaacctctacgcatttcgggagaaccctttaaa
gttcagcaagccaaagagatggtgatggagctgatcagagaccagatcttcagagagcag
aggggcgagtatggctctagaattggaggtggcggcggcgagagcttagatgttcccgtt
ccccggtttgctgttggaatcgtcattggcagaaatggagaaatgatcaagaagatccag
agtgacaccggggtcaggatccagtttaaaccagatgatggaagtgcaccagacaggata
gcacagataatgggtcctcctgaccaggctcagcacgcagcagagataatttcggacctg
ctgaggagcgtccaggccggtgggcctccaggacacggtggaggtggtggaggcggaaga
ggcagaggacgcgggcaaggcaattggaacatggggcctcctggtggcctccaggagttc
acgttctctgttccaaccatgaagactggcctcatcattggaaaaggtggtgagaccatt
aaaggcatcagccaacagtcgggcgccaggattgagctgcagaggaatcctcctcccaac
tctgaccccaatgtcaagatgttcaccgtcagggggtcgcctcagcagatcgactatgcc
aggcagctggtagaggagaagattggcgggcctgtcactccaatgggtggcccacatggc
ccccctggtccacatggaggtcctggcccacatggtcctcctggcccgccaggaccccca
ggtgctcccatgggtccttataaccctgggccttacaaccagggacccccaggaccacat
ggtccccctgcaccctaccagcctcagggctggggaaacggttacccgcactggcagcag
gggcagcctgatccaaacaaagcagcagctgacgccaatgccgcagcgtgggcagcctac
tatgcccaatacggtcagcaacctcaggctccaatgacacccaccggtggagcgcctggc
agtactcagtccaatggtcaaggtgacccacaggctgcaggtcagagtggacaggcagat
tacaccaaggcctgggaggattattacaagaaaatggggcaacagagtcagcaacctcag
gactacaccaaagcctgggaggagtattataagaaacaagggcaagcggcccctcaggca
gcagcgccggcggccgctgcggcccctaccactcaacccggcggccagccagattacagc
gccgcttgggctgaatactaccggcagcaggcagcttactatggcacgagcaaccctcag
accatgggagcggcgccacaagcacctcagggtttacagggttccagcctgagcagcagc
accctaacctcataa
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integrated database retrieval system
