Syngnathoides biaculeatus (alligator pipefish): 133510774
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Entry
133510774 CDS
T09681
Symbol
nfatc2a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2 isoform X1
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04020
Calcium signaling pathway
sbia04148
Efferocytosis
sbia04218
Cellular senescence
sbia04310
Wnt signaling pathway
sbia04370
VEGF signaling pathway
sbia04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
133510774 (nfatc2a)
04370 VEGF signaling pathway
133510774 (nfatc2a)
04020 Calcium signaling pathway
133510774 (nfatc2a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133510774 (nfatc2a)
09143 Cell growth and death
04218 Cellular senescence
133510774 (nfatc2a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
133510774 (nfatc2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133510774 (nfatc2a)
Transcription factors [BR:
sbia03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
133510774 (nfatc2a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
133510774
NCBI-ProteinID:
XP_061695092
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All DBs
Position
2:18733012..18764685
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AA seq
886 aa
AA seq
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MSSLYDQNHSEEELSRVNCPDEDLDFAYLFEYEASCCSGAEGGRQDDPNLASHKVLGPES
EQAFPLEDLSPYAIKSCSRAYIEHQTEVLTGYDTQEAQNCLDSTRLPGLALSPRIEITPS
REYYTHSRESLQNHHPSVNSPRPTLTVPGHDNVSYREPQCLSPASSNSSTSWHSESYSPW
ASPCVSPSGSHNPGDLCPRLQNIHTGSPRTSPGTSPSSGLTEDVYLGTCSPSPRPSSRST
SPQGKRTYDMYRNHTLVPAIRSRSPSPHGGHEENNMGAHYPHSNFPETMNGFSLPTKLVK
TSNQVYTLYPEHHSEGNYLVPCDQDLKSKPGPEPFFVIPPIWSKPLVSSICSIPLASLPP
LEWPMPSCTDHYELHIEVQPKPHHRAHYETEGSRGAVKAHTGGHPVVQLRGYKGKEALGL
QIFIGTADERILKPHAFYQVHRITGKTVTTNSFEKIVNGTKVLEMPLEPKNNMRATIDCA
GILKLRNADIELRKGETDVGRKNTRVRLVFRVHIPQPGGQHVSLQVASHPVECSQRSAHE
LPIVEKQDSDSCSVLGGQQMILSGQNFSSDSKVVFMEKTQDGLQIWEMEATVDKDKSQPS
MLFVEVPSYRDSSVCHPVKVTFCVVNGKRKRSQPQHFTYTPLQSPSIKTEPLDEYESDHM
SFAMPPIMGVLPHSYYHNPHSVIPPDHGLVSSMASCQRLGSALAGQESRFPNQSPAIVFS
HAGKGLSNSPGTYQQTGPLVPDPHCSVLVHTGSQAPPAAPMGAGQHPSIIQFSPTNHHLI
RAGDQTQPDNQPVLYCEGYSPQATHRSPPPQVVADPSQQYPTVIQQQNYVHKGQQKVRVA
PGETSPDRARRVTVKEENLDQAYLDDGELNEIICKDLTGVQTRGQS
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgagctccttgtacgaccagaaccactcagaggaggagctgagccgggtcaactgcccc
gacgaggatctggactttgcgtacttgtttgaatatgaagcatcttgctgcagcggggct
gagggaggacggcaagatgacccaaatcttgcatctcacaaggtcctcggtccagagtca
gagcaagccttcccgctggaagacctctccccgtacgcgattaagtcctgtagtcgcgcc
tacatcgaacaccagactgaggttctgacaggatatgacacccaggaagcacagaactgc
ctagacagtacccggctccctggtttggccttgagcccgcgcattgagattacgccatcc
cgggagtactacacccactctcgcgagtccctgcagaaccaccacccgagtgtcaacagt
ccccgacccaccttgaccgtgcccggccatgacaacgtctcctatcgcgagccccagtgc
ctaagccctgccagcagcaactcatccaccagctggcactcggaaagctactccccctgg
gcgtccccctgcgtgtccccaagtggcagccacaaccctggagacctgtgcccccgttta
cagaacatccacactggctcccctcgcacatcgccgggcacgtcgccgagctccggctta
actgaggacgtctacctgggaacgtgttcaccctcaccgcgcccaagctcccggtccacc
tccccgcagggcaaacgcacttacgacatgtacagaaatcacactttggtgcctgccatt
cgctcccgcagcccctccccacatggcggccacgaggaaaacaacatgggggcccactat
ccgcacagcaacttccctgaaaccatgaatggttttagtttgcccactaaactagttaag
acgtcaaaccaagtctacactctgtatccggagcatcacagcgaggggaactatttggtc
ccctgtgaccaggacttaaaaagcaaacctggtccggaacccttctttgtcattcctccg
atctggtccaagccgctggtctccagcatctgcagcatccctttggcatcgctccctcct
ctggaatggcccatgcccagctgcacggaccactatgagctccacatcgaggtgcagccc
aagccgcatcacagggctcactatgaaacggagggaagtagaggcgccgtcaaggcccac
acaggaggacaccccgtggtgcagttgcggggctataaaggcaaggaggcgcttggcctg
caaatcttcattggcaccgcggacgagcgcattctgaagccgcacgccttctaccaagtg
caccgcatcaccggcaagacggtgaccacaaacagttttgagaagattgtcaacggaacc
aaagtcttggagatgcccctcgaaccgaagaacaacatgagagcaacaatcgactgcgct
ggtatcctgaagctgcggaacgccgacatcgagctgcggaagggcgagacggacgtcggc
cgaaagaacacgcgcgtccgcctggtgttccgtgtgcacatccctcagcccggaggacag
cacgtctctctacaagtagcctcgcatcccgtcgagtgttctcagcgttctgcacatgaa
cttccaatcgtggagaagcaggactcggacagctgctccgttctgggaggccagcagatg
atcctgagcgggcagaacttcagctccgattccaaagtggttttcatggagaaaacgcaa
gatgggttgcagatttgggaaatggaagctaccgtggacaaagataagagccagccaagc
atgctgtttgtggaggtgccgtcctaccgcgactcgtccgtctgccatcctgtcaaagtg
accttctgtgtggtcaacgggaagaggaagcgtagtcagccccagcacttcacctacaca
ccactgcaatctccgtccatcaagaccgaacccctagacgagtatgaatcggaccacatg
agctttgccatgccccccatcatgggcgtactccctcattcctactaccacaacccacac
agcgtcatccctcccgatcacggcctcgtgtccagcatggcctcgtgccagcgcctcggc
tccgccctcgcaggtcaagaatcacgcttcccgaaccaaagcccggccattgttttctcc
catgcagggaaaggcctgagcaacagcccgggaacctatcagcagaccgggccattggtc
cctgacccccactgctctgttctggtccacacgggctctcaagcgccacctgccgctcca
atgggtgcaggccagcacccttccatcatccagttctcccccaccaatcaccacctaatt
cgggcgggagaccaaacacagccagacaaccagcctgtcctttactgcgaaggctactct
ccgcaggcgacccaccgatctccgcctccccaggtggtcgcggacccctctcagcaatac
ccaaccgtcattcagcagcagaattacgttcacaaagggcagcagaaagtcagagtagct
cctggggagacgtcaccagatagagcgaggagggtgaccgtgaaggaggagaacctggac
caggcctacctagatgatggtgagttgaacgaaatcatctgcaaggacctgactggtgtt
cagactcgagggcagtcttag
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