KEGG   Syngnathoides biaculeatus (alligator pipefish): 133510790
Entry
133510790         CDS       T09681                                 
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    133510790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbia03400]
    133510790
DNA repair and recombination proteins [BR:sbia03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     133510790
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_NWD2_C WD_LRWD1 WD40_RFWD3 WDR54 Beta-prop_IP5PC_F Beta-prop_HPS5 Beta-prop_NUP159_NUP214 RAWUL WD40_like Tfb2_C
Other DBs
NCBI-GeneID: 133510790
NCBI-ProteinID: XP_061695120
LinkDB
Position
13:18815917..18825693
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVY
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYARDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQTG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDKKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAIWVSTTKSSVNKWSLKGLHNFRSSGEYDNDCTTPLTPLCTQAEQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAFWDVLKACKGEDLGKVEFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSTDGSDPKLNLGGLLLQALLEFWPRTRIN
PMDEEENEVNHVNGEQENRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSANDKPGEQEKEEDMAILAEEKIELMCQDQVLDPNMDLRTVKYF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcgacgcatcacaggcaaaatgctgctgggcggaggaaagtacaggtatcttacgtc
attagagatgaagtggagaagtacaacagaaatggggtgaatgctctccaactagaccct
gcgttgaaccgcctcttcactgcaggaagggactccatcatccggatatggagtgtctac
cagcataaacaggacccgtatattgcttcaatggagcatcatacagactgggtcaatgac
atagttctttgttgcaatggaaaaacattgatatctgcttcctcggatacaacagttaaa
gtatggaatgcgcataaaggcttttgcatgtcaacgttacgaacacacaaagactatgtg
aaagccttagcctacgctagggacaaggaacttgtggcatcagcagggcttgacaggcag
atatttctgtgggatgtcaatactcttacagcactcacagcttccaacaacactgtcacc
acttcatcgctcagtgggaacaaagattcaatctacagtctggcaatgaaccaaacaggc
acagtgatagtgtctggatccacagaaaaggtgctgagagtgtgggatccacgaacatgt
gcaaaactgatgaagctaaaaggacacacagataatgtcaagtcactgcttttgaatagg
gacggcactcaatgcctctcaggcagttcagatggaacaattcgtctgtggtcccttggt
cagcagcgatgtattgccacgtaccgtgtgcacgatgaaggcgtttgggccctacaggtc
aatgaggctttcacgcatgtctattctggaggtcgagacaagaagatctattgcacagac
ctgcgcaacccagacatccgtgttctcatctgtgaggagaaggctccagtgttgaaaatg
gaactggacagatctgctgacccacctcctgctatctgggtctccaccaccaagtcatct
gttaataaatggtccctcaagggactgcacaacttcagatcatcaggggagtatgataat
gactgcaccacccctctgacaccattgtgcacacaggcagaacaagttatcaagggaggt
gcaagtattatacagtgccacattctgaatgacaagaggcacatacttaccaaagatacc
aacaacaatgttgctttctgggatgtcctgaaggcttgcaaaggcgaagacctcggcaaa
gtggagtttgatgaggagattaaaaagcgtttcaagatggtctacgtgccaaactggttc
tcagttgatttgaaaactgggatgctcaccatcacgctggatgagagcgactgcttcgct
gcttgggtgtcagcaaaggacgcgggtttctcaagcactgatggatctgacccaaaatta
aacttgggtgggctgttgcttcaggctctcctggagttctggcccagaactcgcatcaat
cccatggatgaggaagagaacgaagtgaaccatgtgaatggagagcaggagaaccggatc
cagaaaggaaatggatacttccaggtgccgccacacacaccagttatctttggagaagca
ggaggcagaactctttttaggttgctttgtcgagattccggcggagagactgagtccatg
ctgctaaatgagactgttccacaatgggtcattgatataactgtagataaaaacatgccc
aagttcaacaaaattccattctacctccagccccattcatcctctggtgcaaaaactctg
aaaaaggaccgtctttcagccagtgacatgctgcaggtgaggaaggtgatggagcatgtg
tacgagaagatcatcaacctggacaacgagtctcagaccaccagctcctctgcaaacgac
aagcccggggagcaggaaaaggaggaggacatggctatactagctgaggagaagatagag
ctaatgtgtcaagaccaggttctggatccaaacatggacctgcgaacagttaaatatttt
atctggaaaagtggcggggacttgacacttcactataggcagaaatccacgtga

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