Syngnathoides biaculeatus (alligator pipefish): 133510805
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Entry
133510805 CDS
T09681
Symbol
tnn
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04510
Focal adhesion
sbia04512
ECM-receptor interaction
sbia04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133510805 (tnn)
04518 Integrin signaling
133510805 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133510805 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sbia00536
]
133510805 (tnn)
Glycosaminoglycan binding proteins [BR:
sbia00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133510805 (tnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Pur_ac_phosph_N
Fn3_VIN3
EGF_Tenascin
DUF4998
DUF7949
Arylsulfotran_N
EGF_2
DUF460
DUF4249
Motif
Other DBs
NCBI-GeneID:
133510805
NCBI-ProteinID:
XP_061695147
LinkDB
All DBs
Position
13:complement(9103044..9127253)
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AA seq
1300 aa
AA seq
DB search
MTTKPRWRALLALVCTVSHCSFATTTDSAAPEQAVTFSHVYNIDIPGGAACKLERLPRQD
EKGLQMESTKIDENDIIFRHNIRLQSPKCDCGESEAFKSLLYRVNGLEEEVNYLKSQCAQ
GCCGGGGAIGVDTNCNDRGTYQQETCSCLCYPGWEGPDCSVSSCVDECNDNGRCVDRKCV
CHQGYTGEDCSELMCPNNCNDKGRCVEGQCVCFPHFTGDDCGVQKCPNDCSRNGLCFDGQ
CVCDQGFYGEDCSLALSPQGLRLVQATDVSLLVQWSPVPGADYYVLTYHPRGQGSALKQV
QVPNRDSSYLLTGLDSGLTYFVEVQAVIRGIQSGADEIEAATAVSTVSDIRVLDRTDVSI
QVDWSNPQAEVDHFRLTHTDPSGQEEELSVQPSQEARTKHTIMGLYPGTEYLIAVQAIKG
PIEGNSSTVTSSTNIDAPTNLVTTEATEDTATVSWDPVQAQIEGYMLTYTSDSGSSGEIP
IGRDMTSYTLVGLKPGVVYNINIWAFRGNKVSPKSFTVAETEMDVPTNLLAQKETESSLK
VSWDGVHAEIDGYVLTYSSPDGLSEEIPLGPDSRTYTIKGLRSGVVYTVHIRAVKGNKVS
KKVSTQAETELDAPANLLVHDETESSFRVSWEGVHAEIDGYMLKYRSPDGSSEEILVGPH
MSTYTIRGLKPGVTYTVRIWAVKGNKASGKVSTQAQTELDAPANLLAHDETESSFKVSWD
GVQAEIDGYVLTYSSSEGFSGEISLGPDTTSYSLTGLRPGTMYTIYIWAVKGSKLSRKIS
TQVETELDAPANLLAHDETESSFKVSWDGVQAEIDGYVLTYSSSEGFSGEISLGPDTTSY
SLTALRPGVVYTIYIWAIKGSKLSRKISTQAETELDDPANLLARDQTESSFTVSWDGVKA
EIDGYVLTHTSSEGSSGEIRIGAESDSYSLTGLRPGVIYTVYIWAIKGDRPSRKISVKAE
TDIDAPKDLRALGVTTESATLSWAAPSADIEGYVLTYRDEDGNAETVEKQLGPGETSFAV
SSLQMATRYTVTVVAYRGSKRSKAAETSFKTVGLMYPFPMDCLQIMKNGIKKSGIYTTYI
NNDRSKPIDAYCDMDTDGGGWLVLQRRTTGKLDFLKRWRQYVAGFGNMADEFWIGLEKIH
QMTDTATQYEVRFDLGLGSERAYAVYDSFKVGSSRQKFALAIGNYRGTAGDAMTYHQGRP
WTTVDSDNDIALGNCALTHRGAWWYKNCHLANLNGKWGDNRHSLGVNWEPWKGHLVSLDF
TEMKIRPAGAFSSRKRRSLKVREKNQQNRHQVKSKTASQL
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgaaacctcgatggagggccctgctagccctcgtctgcaccgtgtcgcactgc
agctttgctaccacgacggactccgcagcccccgagcaagcggtgaccttcagccatgtc
tataacatcgacattccagggggtgctgcttgtaaactggagcggctgccgaggcaggat
gaaaaaggtctgcagatggagagcacaaaaattgacgagaacgacatcatcttcaggcac
aacatcagattgcagtcgcccaagtgcgactgcggggagtcggaggcgttcaagtctctc
ctgtacagagtgaatggcttggaagaggaagtcaactacctcaagagtcagtgcgctcag
ggatgttgcggcggcggaggtgcaattggtgtggacacaaattgcaacgaccgtggtacc
taccagcaggaaacttgcagctgcctctgttaccccggatgggaaggcccagactgctcg
gtgtcctcttgtgtggacgagtgcaacgacaacggccgctgcgtggatcgcaagtgcgtc
tgccaccagggctacacgggagaagactgcagtgagctgatgtgccccaacaactgcaac
gacaagggtcgctgcgtggagggacaatgcgtttgcttcccgcacttcactggcgacgac
tgcggcgtccagaagtgtcccaatgactgcagccggaacggcctttgttttgatggccag
tgtgtctgcgaccagggcttttacggagaagactgctcattagctctgagtcctcaaggt
ctaaggctggtccaggcaactgatgtctctctcttggtccagtggtctccagttcctggg
gccgactattacgttttaacatatcatccccgaggtcaagggagcgccttgaagcaggtt
caggttcccaacagggatagctcttatctcctcacgggccttgattctgggcttacctat
tttgtcgaagtccaagctgtcatcagaggcatccagagtggagcggatgagatcgaagcc
gccacggctgtctcaactgtcagcgacatccgagttctggaccgtacagacgtctcaatc
caggtggactggagcaacccgcaagcggaggtggaccacttccggctcacgcacaccgac
ccatcaggacaagaggaggagctgagcgtccagccaagccaagaggcgcggaccaaacac
accatcatgggtctttatccaggaacagaatacttgattgcagtccaagctatcaaagga
ccaattgaggggaactcttccacggtcacaagttctacaaacatcgacgccccaacaaat
ctggtcaccacggaagcaacagaagacaccgcaacggtttcttgggacccagtccaggcc
caaatcgagggctatatgttgacgtacacctcagactcgggttccagcggtgagatccct
attgggcgcgacatgacttcatacacgctggttggcctgaaacctggcgtggtgtacaac
atcaacatctgggccttcagggggaacaaggtcagcccgaagagtttcaccgtggctgag
acagagatggatgttcctactaacctcttggcccagaaagaaactgagagcagcttgaag
gtatcatgggatggcgtccatgcagaaatcgacggctacgtgttaacctatagttctcct
gacggcttgagtgaagaaatcccgcttggacctgacagtagaacttacacaattaaaggt
ttgaggtctggagttgtctatacagtccacatccgggctgtcaaagggaacaaagtcagc
aagaaggtctcaacacaagcagagacagaactggatgctccagctaacctcttagtccat
gatgagacggagagcagcttcagggtgtcatgggagggcgtccatgcagaaatcgatggc
tacatgctgaagtaccgttcccccgacggctcgagcgaggaaatcctagttggaccgcac
atgagcacctacacaatcagaggcttgaaacctggagtcacctacacagtccgcatctgg
gccgtcaagggaaataaagccagcgggaaggtctcaacacaagcacagacagaactggac
gctcctgctaaccttttagcccacgatgagacagagagcagcttcaaggtgtcgtgggat
ggtgtccaggcagaaatcgacggctatgtcctcacctatagctcttcggaggggtttagt
ggggaaatctctctgggaccagacaccacttcctacagcctcacgggcttgagacctggc
acgatgtacactatctacatctgggccgtcaagggaagcaaactcagcaggaagatctca
acacaagtagaaacagaactggacgctcctgctaaccttttagcccacgatgagacagag
agtagcttcaaggtgtcgtgggatggtgtccaggcagaaatcgacggctatgtcctcacc
tacagctcttcggagggctttagtggggaaatctctctgggaccagataccacttcctac
agcttgacggccttaagacctggtgtagtgtacactatctacatctgggccatcaaggga
agcaaactcagcaggaagatctcaacacaagcagaaacagaactggacgatcccgccaat
cttttagcccgagaccaaaccgagagcagcttcacagtatcctgggatggcgtcaaggca
gaaatcgacggttatgtcctcacccacacttcctcggagggctcaagtggggaaatccgc
attggtgccgaaagtgattcttacagtctgactggtttgaggcctggtgtcatctacaca
gtctacatctgggccatcaaaggagacagacccagcaggaagatttcagtcaaagcagaa
acagacattgacgctccgaaggaccttcgggctttaggtgtcaccacagagtcggcaaca
ttgagctgggccgctccttcggctgacattgagggctacgtcctaacctacagggatgag
gacggcaacgcggagactgtcgagaagcagcttggacccggcgagaccagctttgccgtt
tcgagcctccagatggccacgagatacacggtcaccgtcgtcgcttacagagggagcaag
cggagcaaagcggcggaaaccagcttcaaaacggttggcctcatgtaccccttccccatg
gactgccttcagatcatgaaaaatggcatcaagaagagtggcatctacaccacatacatc
aacaatgacaggtccaaaccgatagacgcatattgcgatatggataccgatggaggcggc
tggctggtcctccagcgccgcactactggcaaactggacttcttgaaacgctggaggcag
tacgtagctggttttggcaacatggccgacgagttttggatcgggctggagaagatccac
cagatgaccgacacggccacccagtacgaggtgaggttcgatttgggcctcggctccgag
agggcctacgccgtctacgacagcttcaaggtcggctcctccagacaaaagtttgcgctc
gccatcggcaactacagagggacagcaggtgacgcaatgacctaccaccaaggtcggccc
tggacgactgtggactctgataacgacattgccctcggcaactgcgccctaacgcaccgc
ggggcctggtggtacaaaaactgccacctggccaacctcaacggcaaatggggagacaac
aggcacagtttgggagtcaactgggagccgtggaaaggtcacctggtttccctggacttc
accgagatgaagatccggccggcgggagcgttctccagcaggaagaggcgctcgttgaag
gtcagagagaagaaccaacagaaccgacatcaggtcaagtccaagactgccagccagttg
tag
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integrated database retrieval system
