Syngnathoides biaculeatus (alligator pipefish): 133510837
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Entry
133510837 CDS
T09681
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbia03032
]
133510837 (pif1)
03029 Mitochondrial biogenesis [BR:
sbia03029
]
133510837 (pif1)
Enzymes [BR:
sbia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
133510837 (pif1)
DNA replication proteins [BR:
sbia03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
133510837 (pif1)
Mitochondrial biogenesis [BR:
sbia03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
133510837 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
Pif1_2B_dom
AAA_19
AAA_22
Herpes_Helicase
UvrD_C_2
DEAD
Mg_chelatase
AAA_16
AAA_7
AAA_5
RsgA_GTPase
ABC_tran
PhoH
AAA_24
Motif
Other DBs
NCBI-GeneID:
133510837
NCBI-ProteinID:
XP_061695214
LinkDB
All DBs
Position
13:13561916..13574318
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AA seq
632 aa
AA seq
DB search
MSGGEDTGAQLQCCVTTEHLNASGQATRRQVIRKASVLLGRNEFQELILRIHDGKVPQNY
SLKKFRLFTKFARDGKCTVKLLPENIQVLISNCPPDQLSLFLRTLNIKHQVALSGKTLSA
REKLKAGLPRSFEAISPLQQKDIQKVNELRSNAVPKELSDRTNRTAGAGQQVKRSRSDCT
SSPVKANPSKKPVLSLPTRRLNKGQAAILNAVLTGKNVFFTGSAGTGKSFLLKRILGSLP
PKSTFATASTGVAACHIGGTTLHNFAGIGSGSAPLEQCIELAQRPGVRQHWTSCRHLVID
EISMVDAAFFDKLESVARSVRRSTEPFGGIQLIICGDFLQLPPVSKGKEKAKFCFQARCW
RKVIQVNLELTEVRRQTDQTFIALLQAVRVGRATEEVTNKLIASVYRQIDRDGIVATRLC
THKDDVELTNDNKLQQLPGSTRVFEALDSDPALVRIIDAHSPVSRLLHLKVGAQVMLTKN
LDVTRGLVNGARGVVVAFEPGKHGLPRVRFLCGVTEVLKLERWVFKSGGGAHLSRQQLPL
KLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLESLRVMDFDPRVVRADPD
ALVFYKNLRKERLLMQTVMDDYGDRSNKENIW
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaggcgaggacaccggggcacagctgcagtgttgtgtgacgacagagcacctg
aacgcctcaggacaagccacccggaggcaggtcatccgcaaagcgtctgtccttctggga
cgcaacgagttccaggagctcatcctccgcatccacgatgggaaagtcccccaaaattat
tctctgaagaagttcagactcttcactaagtttgcccgcgatgggaagtgcactgtgaag
ctgctccctgaaaacatccaggtactcatctccaactgccctccggaccagctgagtctc
ttcctgaggactctaaacatcaaacaccaggttgccctgtctggcaaaactctgagcgca
cgagagaaactcaaagcgggtctgcctcgcagctttgaggctatcagcccgcttcagcaa
aaagacatccagaaggtcaacgagcttcgaagtaatgcggtgcccaaagaactttcggac
cgcaccaacaggactgcgggtgcaggacagcaggtcaaacggtcaagaagtgattgtacc
tccagccctgtgaaagccaacccgagcaagaaaccagtcctgtctttgccaacccgtaga
cttaacaaaggacaggctgccatcctcaacgctgtgctgactggaaagaacgtcttcttc
acgggcagcgcaggtacagggaagtccttcttactgaagagaatacttgggtcactgcct
ccaaagagcacctttgccactgccagcactggagtggcggcgtgtcatattggaggaaca
acactgcataactttgcgggtattggctcgggctcagccccgctggagcagtgtatcgag
ctggcccagaggcccggggtgcggcagcactggaccagctgtcgacacctcgtcatcgac
gagatctccatggtggacgccgctttcttcgacaagctcgagtctgtggccaggtcggtg
aggaggtccactgagcctttcgggggtatccagttgattatttgtggcgatttccttcag
ctgcctcctgtttcaaagggaaaagaaaaggccaaattttgtttccaggctagatgttgg
cgtaaagtcatccaggtcaacttggagctaacggaagtgcgacggcaaacggatcagact
ttcatcgccctcctccaggctgtgagggtgggaagggcgacagaagaggttacaaataaa
ttgattgcgagcgtctaccgtcagatcgacagggacggtatcgtagcaaccagactgtgc
acacacaaggatgatgtggagctcaccaacgataacaagctacagcagctgccagggtcg
acgcgagtattcgaggctctggacagcgacccggccttagtgaggattatagacgcccac
agtccggtcagcagactacttcatcttaaagtgggagctcaggtcatgttgacaaagaac
cttgatgtcactcgaggtctggtgaacggagcccgaggggttgtggtggcatttgagcct
ggaaaacacggtctcccacgtgtccgtttcctgtgcggcgtcacggaagtgttgaagctc
gaacgctgggtgttcaagtcggggggtggggcacacctgagccgacagcagctgccactc
aaactggcctgggccatttccatccacaagagccaaggaatgacactagactgtgtggaa
atctccctggctcgggtgtttgagagcggccaggcttacgtggccttgtctcgggctcgg
agtttggagagcctcagggttatggactttgacccccgcgtggtccgagcagaccctgac
gctctcgtcttctataagaatctgaggaaagagaggctgctgatgcagactgtcatggat
gactatggtgacagaagcaacaaagagaacatttggtga
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