Syngnathoides biaculeatus (alligator pipefish): 133510882
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Entry
133510882 CDS
T09681
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbia01009
]
133510882 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133510882 (rpap2)
Enzymes [BR:
sbia01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
133510882 (rpap2)
Protein phosphatases and associated proteins [BR:
sbia01009
]
HAD phosphatases
Fcp/Scp phosphatases
133510882 (rpap2)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
133510882 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
133510882
NCBI-ProteinID:
XP_061695314
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Position
13:complement(13859962..13869381)
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AA seq
634 aa
AA seq
DB search
MDQRSKRTQGNNMEAGERQVSSKAPKNGGKHAKQLSAEAEARRREVIRETLRERLELEKR
AHQVVERLIEDRVSDDFLLDCAKLITTANYKDVVEERFITKLCGYPLCSNKLEKIPKQQY
KISTKTNKVYDITERKSFCSNFCYKASKEFELQISKTPLWLRHDERPPEIKLKKKGNIGS
SGEEVCLTPKCLQEDDIEQPLNTQPEDHQDRSFTAGHSDSSDDEREQDFISSVVSREQRP
RVHWGDRPKRKNEGEGVRRPQAERRKGESRQNQKLEKEVKMTRDESFANGTVHEEVPEEA
KVDEVMDKLKSCSLHAATQPQEDLTAPATTPPLIESTHQRESSSQNRQDLVVLNADSVPS
LNIIQVGMSKRGATGLRSLLKNHGPATKHNLIGQSLLESLRVTLNDWLTEESIKFLHGAD
CTLDPPSIYMKEEEEELDEDDLEDDVTEGSGGEEERRALLPAPDYETLKRETQQMVLKVR
EFYKGTWIVAEDEEKMNGNEETTQDQSTSDSPSLPLVDSKAQHLIQKRITVEKLASCLRN
IVGPLSLTLSDITSDLNNLVRTFRFTNTNIIHKPPEWTLIAVVLLHLLSNVSPVVAEALK
TPSSVLYINTLMEELGLQQQDLLNLLQPFKTIPH
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaggtcaaaacgcacgcaaggaaacaacatggaggccggggaaagacaagtt
tcctctaaagcgcctaaaaatggtggaaaacacgcaaagcagctaagtgccgaagcagaa
gcaaggaggagagaggtgatccgggagacgctgagggagagactggaactggagaaaaga
gcccaccaggtggtggagcgtctcatagaagaccgcgtgtctgatgacttcctgctcgac
tgtgccaagttaatcaccactgctaattacaaagatgttgtggaggaaagattcatcact
aaattgtgtggttatcctttgtgttcaaataaattggaaaagatcccaaagcaacaatac
aaaatctcaacgaagaccaataaggtatatgacataacagagcgtaagtctttttgcagt
aacttttgctataaagcatccaaagaatttgagctgcagatatcaaagacccctctttgg
cttcggcacgatgaaagacctccagaaatcaagctgaagaagaaaggcaacatcggaagt
tctggtgaggaggtatgtctgacaccgaaatgcctacaggaggatgacattgagcaacca
ctgaatactcaacctgaggaccatcaggaccgttccttcacagccggccacagcgacagc
agcgatgacgaacgggagcaggacttcatttccagcgtggtttccagggaacagagaccc
agggtgcactggggtgaccggccaaaacgtaaaaatgaaggtgaaggagttagacgcccg
caggcagaaaggagaaagggtgaaagcagacaaaaccagaagttagaaaaggaagtcaaa
atgactcgtgatgagtcttttgcaaatggaacagtccacgaagaagtgcctgaggaagcc
aaagtggacgaggtgatggataaactgaagtcatgcagcctccatgctgcaacacaacct
caggaagacctcacagctcccgcaaccactccacctctgattgaatcaactcaccaaaga
gaaagcagttcacaaaatcgccaggatcttgtcgtgttgaatgcagacagcgtgcccagc
ctcaatatcatccaggtggggatgagcaagcgaggggcgacaggtctccggagtcttctc
aagaaccacggtccagcgacaaaacacaacctgattggacagtctctacttgaatcctta
agagtgacactgaacgattggctcacagaagagagcattaaattcctgcatggtgctgat
tgtacgcttgaccctccctcaatctacatgaaagaagaggaagaggaattggatgaagat
gaccttgaggatgatgtgactgagggaagtggaggagaggaggagaggagagccttattg
ccagctccggactatgagaccctcaaaagggaaacccagcagatggtgctcaaggtcaga
gagttttacaaaggcacctggattgtggctgaggacgaagaaaagatgaatggaaatgag
gaaaccacccaggaccaaagcacaagtgactctccgtctctgccgctggttgactccaaa
gctcagcatctcatccagaagagaattacggtggagaaactggccagctgtctcaggaac
attgtgggtccgctgagtcttaccttgagtgatatcaccagtgacctcaacaacctcgtc
aggacattcaggtttaccaacaccaacatcatccacaaacctcctgaatggacgctcatc
gccgtagtgcttctccatctgttgtccaatgtgtctccagtggttgccgaagccttgaag
acgccttcatcagttttatatataaacaccctcatggaggagctgggcctacagcagcaa
gacctcttgaaccttctccagccatttaaaacgataccgcactga
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