Syngnathoides biaculeatus (alligator pipefish): 133510907
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Entry
133510907 CDS
T09681
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2 isoform X1
KO
K06246
laminin, gamma 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04382
Cornified envelope formation
sbia04510
Focal adhesion
sbia04512
ECM-receptor interaction
sbia04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133510907 (lamc2)
04518 Integrin signaling
133510907 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133510907 (lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133510907 (lamc2)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
ATG17_like
ACBP4_C
Motif
Other DBs
NCBI-GeneID:
133510907
NCBI-ProteinID:
XP_061695361
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All DBs
Position
13:complement(28287409..28299177)
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AA seq
1117 aa
AA seq
DB search
MKILLAAALFLTLGVVTATDTELRCECNGRSGGCVRDALGLRCVDCSGNSQGRRCERCKD
GFYQEGAALGCTPCGCHPAGSVSHSCDSRGRCACREGVIGTKCDLCPQGTIGPHGCSPRR
RLREDSGSTLCFCYGHGTRCSPQSAYGARDIWSTFKHGPDGWKVATSHGLTPTNVHSRWS
PKYEDVEVISRNSLPVYLYAPAPYLGNQLLSYGQNLSFSLRLDRGIRHPSVNDVILEGSG
LRVSASLGNLHSIVPCGKKINYTFRLDEQPGSRWRPQLTRFQFQTLLQNLSAIKIRATFG
DRGRGYLDNVKMVSAMRGGGSPAHWVRTCVCPPGYEGDFCQECSAGFRRRKAAEGAFGPC
EPCSCKGGDCDPQTGDCYPADETQTCSDGLYLDLWTRTCVTCPCPEGVPCSLVPGSARPE
CHICPPGTAGLRCDECQEGFYGSPGGAAGERRPCRPCPCNGHIDVRVAGSCDRTSGECLK
CVNNTAGRSCDVCLPNFYRGSSDQACRPCDCNLRGSESLGCDAAGRCRCRPGFDGAKCQM
SGECPACFNTAKVKVEELAFKLQQLQTQSSQTGAGLDTGNNTHAEAAMSGAEALVGDLEA
DAARLAVLEKQLQDSLTSLGRTRLSEERDVQNVADATGDIKRRQQTYVTEADQLQNFVAD
MKRKLDEAESGLRSAEFPAGDAPLSPNLLSSLAQTAIGLADKHQTKATAAERTANEALGD
SEKSLALVRNLLNKGNNVKDLIGGVKTAYDGMAARVKGLDDRAIRLGGEATDESNKATGM
LEDISRMARDIPLALTGETGAMAAKFDLLKKAADGSAAGFTALREDVRRDTAAAQDMLER
ARSAMQDTDALTGRVDAAHADTRAALQRIKNNTDKLDAALGTLRGFDRQIGASQAQADAA
IGRLPVLRPIIQRAAKNNANTRGLLDAVSADSDRAMASIDQLEKLIPGLEGAIRSVPPLG
NGAGDINEGVEALRTLAGDVGAEVAGELGHARNLKGDAGQAGDAAAAALRNAKRARDAVG
KMLQDIAAGMANIDQPGTFDPNRLRELEDTLAAARRDTETRLEPQLRDAAAREAAQRRLL
AVLDGDIDGILGDIANLEDILKTVPSGCFNSPPIEKA
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttactcgccgccgcactttttcttacgctcggcgtcgtcacggcgactgac
accgagttgcgttgcgagtgcaacggtcgctcgggcgggtgcgtccgcgacgcgctgggt
cttcgctgcgtggactgctcgggaaacagccaaggtcggcgctgcgaacgctgcaaagac
ggattctaccaagaaggggcggcgctcggctgcacgccgtgcggctgccaccccgcaggt
tccgtgagccacagctgtgacagcagggggcgctgtgcctgcagagagggagtcattgga
acaaagtgtgacctgtgcccccaaggaacaatcggcccccacgggtgttctcctaggcgc
agactcagagaggattccggcagcacgttatgtttctgttacggtcacggcacccggtgt
tctcctcagtcagcgtacggcgcccgcgacatctggagcaccttcaagcacggtcccgac
ggttggaaggtggccacctctcacggcctcaccccaacgaacgtccacagccgctggtcc
cccaagtacgaagacgtggaggtgatctccagaaacagtctgccggtttacctgtatgcg
ccagctccttacctgggcaaccagttgctgagttacggtcaaaacttgtccttctcactg
cgtctggaccgcggcattcggcacccgtcagtcaacgacgtcattctggaaggttccggt
ctccgggtctcagcttcgctgggcaacctgcactccattgttccctgcgggaagaaaatc
aactacaccttcagactggacgaacagccgggcagcaggtggcgccctcagctcacccgg
ttccagttccagactctcctccaaaacctgagcgccatcaagatacgagctacctttgga
gacagaggacgcggttacctggacaacgtgaaaatggtgtcggcaatgcggggaggtggc
tccccggcccactgggtgcgcacctgtgtctgtccgccgggatacgagggcgacttctgt
caagaatgctcggcgggtttccggcggcggaaggcggcggaaggagcgttcggcccctgc
gagccgtgcagctgcaaggggggcgactgcgacccgcaaacgggcgactgctatcccgca
gacgagacgcaaacctgctcggatgggctttacttggatttgtggacccgaacctgcgtg
acgtgtccctgtcccgaaggagtgccgtgctcgctggttcctgggtcggcgcgacccgag
tgtcacatctgtccgcctggaaccgcaggcctacgctgtgatgagtgtcaggagggattt
tatggctcgcccggaggggccgccggcgagcggcggccgtgccgaccctgcccgtgcaac
ggccacattgacgtccgagtggcgggaagctgcgatcgaaccagcggcgaatgtctgaag
tgtgtcaacaacacggcgggtcgcagctgtgacgtatgcttgccaaacttttaccgcggc
agctcggaccaggcctgcagaccgtgcgactgcaatcttcgaggctccgagtcactgggg
tgtgacgccgccggtcgctgtcgctgcagaccgggctttgacggcgcaaagtgtcagatg
tccggagagtgtcccgcctgtttcaatacagccaaagtcaaggtggaggagttggctttc
aaacttcagcagttgcagacgcagagctctcagacgggtgccggcctcgataccggcaac
aacacccacgcagaggctgcgatgagtggggccgaggcgctcgtgggtgacctggaggcc
gatgcggcgcggctggcagtactggaaaagcagctgcaggacagtctgacatctctcggt
cgcactcgactgtccgaggaacgggacgtccagaacgtggccgacgcgaccggcgacatc
aaacgacggcagcagacctacgtgaccgaagcagatcagcttcagaatttcgtggccgac
atgaaacgcaaactggacgaggccgagtcgggtctccgctcagctgagtttccagcgggt
gatgctcctctgagtccaaacctcctgtcctcgttggcacaaacggcgataggcttggct
gataaacatcagacgaaggcgacggcagccgagcggactgccaacgaggctctgggagac
tctgagaaaagtttggcacttgtccggaatcttctcaacaaggggaacaatgtcaaagat
ctgatcggaggagtgaaaactgcgtatgacgggatggcggcgcgggtcaagggtttggac
gaccgggcgatccgcctgggcggcgaggccacagacgagagcaacaaggccacgggcatg
ctggaagacatcagcaggatggccagagacatcccgctcgccctgacgggcgagacgggc
gccatggccgccaagtttgacctcctgaagaaggcggcggacgggagcgcggcgggcttc
acggcgctgcgggaagacgtacggcgggacacggccgccgcccaggacatgctggagcga
gccaggagtgcaatgcaggacacggatgcgctcacaggccgagtggacgccgcccacgcc
gacaccagggcggcgcttcagcgcattaagaacaacaccgacaagctggacgccgccctc
ggcactctgagaggctttgaccggcagatcggcgccagccaagcgcaggcggatgccgcc
atcgggcggcttcccgttttgcgcccgatcattcagcgagccgccaagaacaacgctaat
acgcggggcttgctggacgccgtgtccgcggattccgacagagccatggcgtccatcgac
cagctggagaaactgattcctggtctggagggagcgatcaggtccgtaccgcctctcgga
aacggggccggcgacatcaacgagggcgtcgaggcgctgcggacgctggcgggcgacgtc
ggcgccgaggtcgccggcgagctcggccacgccaggaacttgaagggcgacgccgggcag
gccggagatgccgccgccgccgccctgaggaacgccaaacgggccagagacgccgtggga
aaaatgctgcaggacattgccgcggggatggccaacatcgaccaaccgggcacgtttgac
ccaaaccgcctccgggagctggaggacacgttggcggcggcccgccgggacacggagacc
cgtctcgagcctcagctgagagacgcggcggcgagggaagcggcgcagcgccgcctgctg
gccgtcctagacggagacatcgacggcatcttgggagacatcgccaacctggaggacatc
ttgaagaccgtacccagcgggtgcttcaacagcccccccatcgagaaggcctga
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