Syngnathoides biaculeatus (alligator pipefish): 133511019
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Entry
133511019 CDS
T09681
Symbol
ccdc39
Name
(RefSeq) coiled-coil domain-containing protein 39
KO
K23729
coiled-coil domain-containing protein 39
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sbia03037
]
133511019 (ccdc39)
04990 Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
133511019 (ccdc39)
Cilium and associated proteins [BR:
sbia03037
]
Motile cilia and associated proteins
96 nano-molecular ruler
133511019 (ccdc39)
Domain-containing proteins not elsewhere classified [BR:
sbia04990
]
Other domain-containing proteins
Others
133511019 (ccdc39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC39
SlyX
Motif
Other DBs
NCBI-GeneID:
133511019
NCBI-ProteinID:
XP_061695575
LinkDB
All DBs
Position
13:complement(14540347..14565953)
Genome browser
AA seq
1844 aa
AA seq
DB search
MAAFAAKVLSEMGWEQHYALPVLNNENKVLIDEICNIKRELLKLKNKRETNQEKKQLGDD
CLRNAKKELELTEALCRAKDREENLEKHLTAIAEREKGRLGQENTKMEKDLQYLAEKIKT
LENHILKAKHKLEQFRLQMNWDQQAMNSFLEESTRKDDDMMAIMKYSHQDEHTIKSLTLA
IERTTVEGNKKHRALDKEMTETLAAQIALDKTTENLQQAHMETEQIIHQWENTIQQMKQR
DADMHQCALKLADTNQVIRERNGTLTEMKHLQEAQFNDNRDKEKKLATANQRAAKLRLNF
KEQERNYVEMQDELKTCRALLDRTTSSVHSMRSHISRLKEDIRNNNDKLIQTGAQNVALE
EKLKSECENALSEKERAAQMEIFLKEEEQAIKELEVQLRERGKDLVRCKQHGEEFREKEK
NYMAHILRSRCTINALENQLRKQEDYLVKQMMIMNEKDSQLIILDKKLARLQGIVGDSDE
KIGMELKITEMLASLEERKKTSSKVLIKIKESEEDIRYLRKEREDSADQKEELSNKVAEV
KLINNNIERELKKLRLKKQEHIVEQNISKLEVKRKRDLLFNKANSVLSLEKRQLNVKKAI
QERQEEIRVYSQMLNQQLRTTEQERQKISMELNGKLSKIEAAKKHYEIVTFTMAAQEDDE
DAVKSQAHYIAKAALEKAELKQQGECLNNKIRKAEQENKALENTTLLFHISNTGFHTTVV
KAKEATPDYQEKFHLEEQLQVAKETLESKRQLAQKLREELQEINSALKNRLQAKQDLEKE
VRQLMEFNDSIDEMLVTATKFKPRLKSALQQHFQQANLLFPTFTTPGTSRRSNLVSRSPS
VRCAAFSASSCKPSEDPDPTVKTVILGQDLPIVRDQPGHFLMYVPMWHSRDFGRIMLSAA
MAVFPDFGWEDCYSVPGPNAENKALIEEIIKKRKELSHLKSKREGRKDQKQLATQFLKHV
KAELENMEALCQAKDREAELEKHLTAIAQREIGHLTQENAQMEKELRSLAERKNFLESDI
FKVKQKLEHFRIQMDWDQQAMDSFLDESARKDDDVMAIIKYSQQDEQRIKSLTLAIERTT
LEAKKKRKALDMEMTENLSAQIALDKMAENLQQAHKETERIIHQWENTIQQMKQRDADIQ
QWALKLAETNQIIRERNDSLTEMKHLHDSQMNDNKQKGRKLTSVHREAAKLRQELKAHEK
NYMEMQDELKSCKTSMDRTTSTVESMKSHISGLKEEIQKSNVKLKQTSAQNVALEEKRKA
VTQNALSEKEKAAQMEQFLTDEEQTIKELDLQLRECREELFRCRQHVDNLKRMEKDSLAQ
ELRSKSIITSLERELRKQEKHLMRQQIIKSEKDLQIIFLEKKLARLKGLDDSDEKQALEI
KISDLSKALDERMKTSSTIINRIKESESDIRYLRKENERSVAEKEALYNKVDELKLINNN
NEKELKKLGLHKQEQLVEQNIFKLEVKRKRDLLFDKANGVVSLEKRQLNVKKAIQERQEE
IRVYSQMLSQELKTTEQERQRISAELNAKFSKIDVMKKHFEVVTFSMGAPGGDDEDAVKC
QAQYITKAALERAELIQQGECLTAKISKAEEENKALENTTLLFNISNSRFHTSVNKAKES
SAEYQEKIKMEEQLRLVEDTLKYKRRQVRELQQEQQELNNVLDSVLQAKQAENQKIDHTQ
SLISRLNREVASQQEKINRALKHCSKLTQKIRFSRNTKAETFEEKDIRLKQLKDFNKNIN
KMLNDVTKGRPDLRSVLESYFLQTSLSFPSPPSTPSSHRSCKTNSARISTSSRSSASSAS
RRETSAPQSPLLKTVALSLDITVPSPPLSASRGSSSAMSRIKSP
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggccgcatttgcagcaaaggttttgtcagagatgggctgggagcagcattatgccctc
ccagtcctcaacaatgaaaacaaggttttaatagacgagatatgtaatataaagagggag
ctcctgaaactgaaaaacaaacgcgagaccaatcaagaaaaaaaacaattaggggacgat
tgcctgagaaatgcaaaaaaggagctggaactcacagaggctctgtgtagagccaaagac
agagaggaaaatctggaaaaacacctcaccgccatcgccgaaagagaaaagggccgtctg
gggcaggaaaatacgaagatggaaaaagatcttcaatatttggctgagaagataaaaact
cttgagaaccacattttgaaggcgaaacacaagctggagcaatttcggctgcaaatgaac
tgggaccagcaggccatgaattcttttttggaggagtcgaccagaaaagatgatgacatg
atggccattatgaagtactcacatcaggacgagcacaccatcaagtcgcttactttggcc
attgagaggacaacagtggagggcaacaaaaagcacagagcactcgacaaggaaatgaca
gagactttagccgcacagatcgctttagacaagacgactgagaatttgcagcaggctcac
atggaaactgagcagatcatccaccaatgggaaaacaccatccagcagatgaagcaaaga
gatgcagatatgcatcagtgtgctctgaaacttgcagacaccaaccaggtcatcagggaa
aggaacggcactttgacagaaatgaagcacctgcaggaggcccagttcaacgacaacagg
gacaaagagaagaagctggctacagccaatcagcgagccgcaaaactgcgactcaacttc
aaggagcaggagaggaattacgttgagatgcaggatgagctgaaaacttgcagagcttta
ctggatagaacaaccagcagtgtgcactcgatgaggtctcacataagcaggctcaaggaa
gacatccggaacaacaacgacaaactgattcagactggggcccaaaatgttgccctggag
gagaagctgaaatcggaatgtgaaaacgccctgagtgagaaagagagagctgcccagatg
gaaattttcctcaaggaagaggagcaggccatcaaggagctggaagttcagctacgtgaa
cgtggcaaggacctcgtccgctgcaaacagcacggggaggaatttagggaaaaggaaaag
aattatatggcgcatatattacggagcaggtgcaccatcaacgcgttggaaaaccagctc
aggaaacaggaggactatttagtcaaacagatgatgatcatgaatgaaaaggactcccag
ttgatcattttagacaaaaaactagcacgactgcaaggtattgtcggtgattccgacgaa
aagatagggatggagttgaagatcacggagatgctggcatccctcgaggagaggaagaag
acgtccagtaaggtcctcatcaaaatcaaggagtcggaggaggacattcgctatttgagg
aaagagagggaggattccgcagatcagaaggaagagctgtccaacaaagtagcagaggtc
aagctgatcaataataatatcgaaagagagctgaagaaacttcggttgaagaaacaggaa
cacatcgtggagcagaacatctccaagctggaggtcaagcgtaagagggatctgctgttc
aataaagccaacagcgtgctgtccttggagaaaagacaactgaacgtgaagaaagccatc
caggagaggcaagaggagatcagagtctacagtcaaatgctcaatcagcagttgaggacc
acggagcaggagagacagaaaatcagtatggaactgaatggaaagctgtccaagattgaa
gccgcgaagaaacactacgagatcgtgacctttaccatggcggcccaagaggatgatgag
gatgcggtgaagtctcaagcgcattacatcgctaaggctgcgctggagaaggcagaactc
aagcagcaaggagagtgtctaaataacaaaatccgcaaagccgaacaggaaaataaagct
ctggagaacacgactctattgttccacatcagtaatactggatttcacacaacagtcgtc
aaagccaaagaagccactccagattaccaggaaaagttccatcttgaagaacagcttcag
gtagccaaggagacattggagtccaagaggcaactcgctcaaaagcttcgagaggagctg
caggaaattaacagtgccttgaagaaccgcctccaagccaaacaggatctggagaaagaa
gtcaggcagctgatggagttcaacgattccatcgacgagatgctggtcaccgccaccaag
ttcaaacctcgcctcaaatcggcgctgcagcaacactttcagcaggccaatctgcttttt
cccacttttactacccctggtacgagtcgaaggtctaacctggtcagcaggtccccctca
gtcaggtgtgctgcattctcagccagtagctgcaagccctctgaagatccggaccccact
gtgaagactgtgattctgggccaggatctgccaattgtgcgggaccagccaggacacttt
ttaatgtatgttcctatgtggcactcaagagactttggacgtataatgttaagtgctgcc
atggcagttttcccagattttggctgggaggactgttactcagttcccgggcctaatgct
gaaaacaaggcgttaatagaagagattatcaagaaaaggaaagaactctcgcatttgaaa
agcaagcgagagggtcgcaaagatcaaaagcaactggcaacacaattcttgaaacatgtc
aaagcagagctggaaaatatggaggctctgtgccaggccaaagacagagaagccgaattg
gagaagcacctcactgccatcgcacagagagaaatcggccatctgacgcaggagaacgct
cagatggagaaggagcttcgatctttggctgagaggaaaaatttcctggagagcgacatt
ttcaaggtgaaacagaagctggagcactttcgcatccagatggactgggaccagcaggcc
atggattctttcttggatgagtcagcacgaaaagacgacgacgtgatggctatcatcaag
tattcgcagcaggatgagcagaggattaagtcactcactttggccattgagaggacgacg
ctggaggccaagaaaaagcgcaaagcccttgacatggaaatgacagagaatttatctgcg
cagattgctttagacaagatggcagagaatttgcagcaggctcacaaggaaacagagcgg
atcatccaccagtgggaaaacaccatccaacagatgaagcaaagagatgctgatatacaa
cagtgggctctgaaacttgcagaaaccaaccaaatcatcagggaaaggaatgactccttg
acagaaatgaagcacttgcacgactctcagatgaatgacaacaagcaaaaagggaggaaa
ttgacgtcagtccatcgtgaggcggcaaaactacggcaagaattgaaggcgcatgagaag
aattacatggaaatgcaggatgagctcaaaagttgtaaaacctcaatggatagaacaacc
tccactgtggagtcgatgaagtcccacatctccgggctcaaggaggaaatccagaaaagc
aatgtcaaactgaagcaaacctcggcccaaaatgttgccctcgaagagaagcggaaagct
gtgacgcagaatgccctcagtgagaaggagaaagctgcccaaatggaacagttcctcaca
gatgaggaacagaccattaaggagttggatctccaactgcgtgaatgcagagaggagctc
ttccgatgtagacagcatgttgacaacctcaagagaatggagaaggactctttggcccaa
gagttgcggagcaagtctatcatcaccagtctggaacgtgagctcaggaagcaggagaag
catttgatgaggcagcagattattaagagtgaaaaagacctccagatcatctttttggag
aagaagcttgcacgactgaaaggtcttgatgactcagatgaaaagcaagcgttagaaatt
aagatcagcgatctgagcaaagcccttgatgagaggatgaagacatctagcacaattatc
aacagaatcaaagagtccgagagtgatattcgctatttgaggaaagagaatgagaggtca
gtagcagagaaagaagcgctatacaacaaagttgatgagttgaagctcatcaataataat
aatgaaaaagagcttaagaaacttggcctccacaaacaggaacagctcgtggagcagaat
atcttcaagctggaggtcaagcgtaagagggatcttctgtttgacaaagccaacggcgta
gtgtccttggagaaaaggcaactgaatgtgaagaaagccattcaggagaggcaagaggaa
atcagagtctacagtcaaatgctcagccaggaactgaagactacagagcaggagagacag
agaatcagtgctgaactcaatgcaaagttttccaagatcgacgtcatgaagaaacatttc
gaagtggtaacattctcaatgggagcccctggaggggatgacgaggatgcagtaaagtgt
caagcacagtacattaccaaggcagcgctagagagagcagaactcatacagcagggagag
tgtctaactgccaaaatcagcaaggctgaggaggaaaataaagctctggagaacacaact
ctgttattcaatatcagcaattcacgattccacacatcagtaaacaaagcaaaagaatcc
agtgcagaataccaggaaaaaatcaagatggaagagcagttgcgtttggttgaagacaca
cttaaatacaagagaagacaagtcagagagcttcagcaagagcaacaggaactgaacaat
gtcttagatagtgtcctgcaggccaagcaggcggaaaaccaaaagatcgatcacacgcag
tccctcatcagcagactgaatcgtgaggttgcttctcagcaggaaaaaattaacagagcc
ttaaaacattgctctaaattaacccaaaagatccggttctcaagaaacaccaaggcagag
acttttgaggagaaggacatcaggctcaaacagttaaaggacttcaacaagaatatcaac
aagatgctcaatgatgtcaccaagggcaggcctgacctcagatcagtcttggagagctac
ttcctccagaccagcttgtcttttccgtctcctccctccactcccagcagccaccgaagc
tgtaagaccaactcagcccgcatctctacctcctccaggtcttcagcttcctcagccagt
agacgggaaacctctgcacctcagtcccctctactgaagactgtggccctgagtctagat
ataactgttccttcacctcctctttcagccagcagaggctccagctcagccatgagtcgc
ataaagagtccatag
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integrated database retrieval system
