Syngnathoides biaculeatus (alligator pipefish): 133511031
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Entry
133511031 CDS
T09681
Symbol
aire
Name
(RefSeq) autoimmune regulator
KO
K10603
autoimmune regulator
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133511031 (aire)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133511031 (aire)
04121 Ubiquitin system [BR:
sbia04121
]
133511031 (aire)
Transcription factors [BR:
sbia03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
133511031 (aire)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133511031 (aire)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSR
PHD
PHD-1st_NSD
PHDvar_NSD
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
133511031
NCBI-ProteinID:
XP_061695595
LinkDB
All DBs
Position
13:15452144..15471235
Genome browser
AA seq
471 aa
AA seq
DB search
MSRVEALPDPKLDSLLKGLRTEIAMAVDDTFPLVHGLADKNIITEQMLKDTVEQEGREGV
HKALYSLLSWVLDQSTSTMRTFWRTLNKSYNLDSYPKLRPLLAPHNHVSDNTSPQGKRTH
GKKRSHKDREDQYRTKTTHGSPEGKVKLYKVKNEVPPQQATNASVQKVGIPSSSAAVSTG
ELSDTCGSSKEKLLILDGSARKYLKVPGDFNKCKELKSKAAMATFQHKTETMAGSAQVPP
FSTQPCHTCVQSVIFFFFNTLNLFMQSHHNDDECAACKDGGELICCDGCPRAFHLTCLEP
PLASIPSGSWRCEGCSGRVGQEHKNQQALQRPRTKSIPSTVDMSLFPLLSSSTASSKEYP
DSCGICHLGGGDLARCLQCSKRYHRHCHFPIGRSSCLSCSVALVSTAEKEAESKCLQLPV
SVRNPHGHEQRSSVHKDELDSILGDASLDSILQWAFHNIPQPLLNSHGCYQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgggtggaagccctcccggaccccaaacttgactcgctcctaaagggtctccgt
acggaaattgccatggctgtggatgacaccttcccgctagttcatggcctggccgacaag
aacatcatcactgagcagatgctgaaggacactgtggagcaggagggccgggaaggtgtc
cacaaggccttgtactcactgctgtcctgggtactggatcagagtacttccaccatgcgg
accttctggaggaccctgaacaagtcctataacctggacagctaccccaagctgcgacca
ctcctcgccccccacaaccatgtcagcgacaatacatctcctcaaggcaagaggactcac
ggaaaaaagaggagccacaaggacagagaagatcaatatcgcaccaagacgacccacgga
tctccagagggtaaagtgaagctgtacaaagtgaagaatgaagttcctcctcagcaagca
acaaatgcgtcagtccagaaagtaggaattccctcgtcttcggcggcggtctccaccggt
gagctgtcagacacgtgtggatcatcgaaggagaaacttttgatcttggatggttctgca
agaaagtacctcaaagttccaggagactttaacaaatgtaaagagctcaagtccaaagct
gccatggcaacctttcaacacaagacggagacaatggcaggctctgcacaggtcccgcca
ttctccacacagccttgtcatacttgcgtgcaaagcgtcattttttttttttttaatact
ctaaatctgttcatgcagagtcaccacaacgacgacgagtgcgccgcgtgcaaagacgga
ggtgagttgatctgctgtgatggatgcccgcgagcttttcatttaacctgcctggaacct
ccgcttgcgtccatccccagtggttcttggcgatgtgagggctgcagtggcagagtgggg
caagaacacaaaaaccagcaagctttgcaacggccacggacaaaatccatcccctccacc
gtagacatgtcgttgttccccttactgtcctcctccacagcctccagcaaggagtaccca
gactcgtgtggtatttgtcacctgggaggaggagacctcgctcgctgcctccagtgttcc
aagcgataccaccgccactgccacttccccatcgggagatccagctgcctgtcgtgctcc
gtggcgctggtcagcactgcagaaaaagaggccgagtcaaaatgtttgcagcttcccgtg
tccgtccgcaacccgcacggccatgagcagcgctcatcggtccacaaagacgaactggac
tccatcctgggagatgcctccttggatagcatcctgcaatgggctttccataacatccct
caacctcttctaaactctcacggatgctaccagtga
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