Syngnathoides biaculeatus (alligator pipefish): 133511083
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Entry
133511083 CDS
T09681
Name
(RefSeq) vimentin A2-like
KO
K07606
vimentin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133511083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133511083
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbia04812
]
133511083
04147 Exosome [BR:
sbia04147
]
133511083
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
133511083
Cytoskeleton proteins [BR:
sbia04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
133511083
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133511083
Exosomal proteins of other cancer cells
133511083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Myosin_tail_1
DUF7491
TolA_bind_tri
TPR_MLP1_2
CENP-Q
Motif
Other DBs
NCBI-GeneID:
133511083
NCBI-ProteinID:
XP_061695667
LinkDB
All DBs
Position
13:complement(5141039..5150716)
Genome browser
AA seq
461 aa
AA seq
DB search
MSTFRAAAPHSSYRKMFAGDRTAVRSSYSSRQYSAPVRTTRLLSFGAPVGSGGGIYATKT
QRLRSSSAAMPRLASEQLDFTLSDAINSEFIANRTNEKAQMQSLNDRFASYIEKVRFLEQ
QNKILLAELEQLRGKGTSRVGDLYEDQMRELRRQVDQLSNEKARVEVHRDNLADDIGRLR
DKLQDEMSLREEAEANLQSFRQDVDNAALTRLDLERKVESLQEEIDFIKKLHDEEMLELQ
NQIHMQQHVQVDMDVAKPDLTAALRDVRLQYENLASKNIQESEDWYKSKFADLTEAAARN
NEALRLAKQEANDYRRQVQALTCEVDALKGTNESMERQMREMEDNFSAETSGYQETVARL
EEDIHNMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISTPMPNFSSLNLRE
TMIDYKPHMETATTKKVLIKTIETRDGQVINESTQNHDDME
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactttcagagcagccgctcctcactcctcctacaggaagatgttcgccggagac
agaaccgcggtgagaagcagctacagcagccgccagtattccgctcccgtgcgcacgacc
cggctgctgtccttcggggcgcccgtgggctccggcggcgggatctacgccaccaagacg
cagcgtctccgcagtagcagcgcggcgatgccccggctcgcctccgagcagctggacttc
acgctgtccgacgccatcaacagcgagttcatcgccaaccgcaccaacgagaaggcgcag
atgcagtcgctcaacgaccgcttcgccagctacatcgagaaggtgcgcttcctggagcag
cagaacaagatcctgctggccgagctggagcagctgcgcggcaagggcacgtcccgagtc
ggcgacctgtacgaggaccagatgcgggagctgaggcgccaggtggaccagctgagcaac
gagaaggctcgggtggaggtgcaccgggacaacctggccgacgacatcgggaggctcaga
gacaagttgcaggatgagatgtccctcagggaagaggccgaggccaacttgcaaagcttc
cgacaggatgtggacaacgctgccctcaccagactggacctggagaggaaggtggagtcc
cttcaggaggaaattgacttcatcaagaagctgcatgatgaggaaatgctggagctgcag
aatcagatccacatgcagcagcacgtgcaggtggacatggacgtggccaagccggacttg
acggccgctctgagggacgtacgcctgcagtacgaaaacctggcctccaaaaacatccag
gagtctgaggattggtacaagtccaagttcgccgacctcaccgaagcggccgcgcgcaac
aacgaagctctcaggctggccaagcaagaggctaacgactacaggcgacaggttcaggcc
ctcacctgcgaggtggatgctctcaaaggaactaacgagtcgatggagcggcagatgcgg
gagatggaggacaatttctccgccgagacgtccggctatcaggaaacggtcgctcgcctg
gaggaggacatccacaacatgaaggatgagatggcccgccacctgcgggagtaccaggac
ctcctcaacgtcaagatggccttggacatcgagatcgccacctacaggaagctgctggaa
ggagaagagagcagaatctccaccccgatgccgaacttctcctctctcaacctaagagaa
accatgatcgattacaaacctcacatggaaaccgcgaccaccaagaaggttctgatcaag
accatcgagaccagagacggccaggtgatcaacgagtcgacccaaaaccacgatgacatg
gagtaa
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