Syngnathoides biaculeatus (alligator pipefish): 133511122
Help
Entry
133511122 CDS
T09681
Symbol
carmil3
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3 isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133511122 (carmil3)
Membrane trafficking [BR:
sbia04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
133511122 (carmil3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Myosin_TH1
Motif
Other DBs
NCBI-GeneID:
133511122
NCBI-ProteinID:
XP_061695740
LinkDB
All DBs
Position
13:19684196..19825159
Genome browser
AA seq
1426 aa
AA seq
DB search
MASKDIAASGFASVSREITESIRKVLDKQAIKFVRPVKLDTRSGKSDDRILVLTTWRLYL
FAVKVPTKVEVTFNFLEIRAMNTYQEHQVIIDTDKITYSLRLETQDQLDHMVNHINYALS
RVFNNSIYAPPICRAEEHMSDGIHKYSPISESSLEPQKTCGGFSETYAALCDYNGIGCKE
EVQWDVDTIYHSQDNRELNLLDFSHLDSRDLAVIVASIAYNTWFTKLFCKDMRILYTLQG
SEVVDQVLHAVSKSNSLEEITLENAGLKSDFPQKMASALSENPASVIHSLSLAHNTLDNQ
GVSNLIQQVCRLNKGLRLLNLSKTSLSSKGVVSLSQALCSSDDYSNSLLHLDLSKNPGVL
SGEDATNLYLLLAQPNCLVHLDLSGTDCTVDLLFGALLRGCCADLSYLNLSKNFFSNRKA
RDSLPTFRQFFSSAFSLTHVSLASMKVPPDWLRALFLGLSNNPHITDLQLDISACELRSA
GAGVIQELFPRVSCVGTLDISDNGLDSDLLAVIPAFSRHPSLKHLMLGKNFNIKGRVLDE
ILQKLVHLVQEEECVLQSLSLAESRLRQRGTMLVNALGSNTCLRKVDLSGNGLEDSGAKM
LSKALQINTTLRSVTWDRNNTTVTGFQDVARAMEHNFTLQYMPLPLSDATQAYRSAPEKT
DQALTKIQRALLRNNQTQRFSQKQALRLHQGLVTSTAEQVMERLCVRVQQQIGILKGSEE
TEEVQAARQILNEARNSRALYPSLCELAHVLSVDGPVRQRLDTLAGELARAADKELQVVV
DSMVSLCRELCPMSCLAAERLSPHLSSISEQVSIPRSAIRNALMERASEDINKALEDVKL
SVVSYLTNSIVDQILQELYTNHKTLVLLREVSQTKRWDDMEKERYTVRQSRVVASLEFPD
EDVGVSLGIDTMAIKKRSSRTRRIRPVSTRPSLGDEPSSSPTPSAPAPSAHLSHSASWEC
LSTLPTNGSPLRHVTHVRPRPPRRHRAVHLPPESQYFGNGSVNTLDDGLLDFYNKRVLPD
SQLSSIHQAQSLRRKKRRSMLSIFSGFRKNRNSTLSNQELDSTSENLYSMIQHPKDGGRA
DNSVHGANGTMPSPRVREGVPVQGLRPTSPSYLIQRQSTDLVSMVYSCIGADIEESDASS
TCDTKAMDEVSDKSAGISGGPPDSGTNGHEASSKQQADRLAETGRQERIVPLTGLQTESD
GDTQYLDKGVTAAPCGLRPEPPPQITKPSLAAMRQRHLQESLAEAGRLVMEEQNERKVEE
KVRTQGPEGQRPLIPTKPSLDLSRDKTSPETPKISPKVSPISQEGHETHRSAPLAQSVSH
EEVTSREWRSPPPPVKPEIDSTADSAVCEGKNEDRNGFPVTSRGTRKSNSFDTGMERGGH
YDLERFSDPRLSVKKNNLPHYRNRSLDYPTGTSCYESPQLGNKDVL
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaagatatcgcggcgtcgggcttcgccagtgtcagccgggaaattacagag
agcatcaggaaggtgctggacaaacaggccattaaatttgtgagacctgtcaaactggac
accaggagtggtaaatcggatgacagaattctggtcctgacaacatggagactgtatctc
tttgctgtcaaagtcccgacaaaggtggaagtcacattcaacttcttggaaatacgtgca
atgaacacttatcaagagcatcaggttataatcgatacagacaagatcacgtattcactg
agactggagacccaggaccagttggatcatatggtcaatcacatcaactatgccctctcc
cgagtcttcaacaactccatttatgctccacctatttgtcgagcagaagagcatatgtct
gatggaattcacaaatattcaccaatttcagagtcatcgttagaaccccagaaaacttgc
ggaggtttttcagaaacatatgcagctctatgtgactacaatggaattgggtgcaaagag
gaagtgcaatgggatgttgataccatctaccactctcaagataaccgggaattaaatttg
ctggatttcagtcatcttgacagcagggaccttgctgtgattgttgcatccattgcgtac
aacacttggtttaccaagctgttctgcaaagacatgcggattttgtatactctccagggg
tcagaagtggtggaccaggtccttcatgcagtcagtaagtccaacagcctagaagaaatc
actttggaaaatgctggactaaaatcggatttccctcaaaaaatggcatcagccctgtca
gagaacccagcctccgtgattcattctctcagcctggctcacaacacacttgataaccaa
ggtgtttccaatctgattcaacaagtatgtcgtctaaacaagggcctacgtctcctgaat
ctctcaaagacctcactttcctccaaaggtgttgtgtctctatcccaggcattgtgttca
agtgatgattactccaattctttgctgcaccttgaccttagtaaaaacccaggggttctg
tctggagaagatgccacgaatctgtacctgttgcttgcccagcccaactgtctagtgcat
ttggatctttctggaactgactgcacagtggacttgttgtttggggcattgctgagaggc
tgctgtgcggacctttcctacctgaacttgtccaagaatttcttctcgaacaggaaagca
agagattctctgccaacattccggcagttcttcagctcagcattcagcctgactcatgtc
agcctggcctccatgaaggttcctcctgattggcttcgagccctgttccttggcctttct
aataacccccatatcacagatttgcagctggatatcagcgcatgtgagttaaggtctgca
ggtgctggggttattcaggaactttttccaagagtttcgtgtgtcgggactttagatatc
tccgataatggcttggactctgacttgctagctgtcattccagcattttccagacacccc
tccctcaaacacctgatgctggggaagaacttcaacatcaagggaagggtgctggatgaa
atactccagaaactggttcatttggttcaagaggaagagtgtgtcctgcaatctctctct
ttggctgaatcgagactccgccagcggggcaccatgttagtcaatgctctaggctctaac
acatgcctacggaaggtggacctgagtggcaacggcctggaggactccggagcaaagatg
ctaagcaaagccttgcaaattaatacaacactcagaagtgttacatgggatcgcaacaac
accacggtgacaggcttccaagatgtggcaagagcaatggaacacaactttaccctgcag
tacatgcctctccccctcagtgatgccacacaagcataccgcagtgccccagagaagacc
gaccaagctttgaccaagatccaacgtgccctgctcagaaacaaccagacgcagcgtttc
tctcaaaagcaagctcttagactgcaccagggtctcgtcaccagtacagctgaacaggtg
atggagcgtttgtgtgtgcgggtgcaacagcaaattggtatcctgaaaggctctgaggaa
acagaggaggtccaagcagcaaggcagatcctcaatgaagccagaaactccagagctctg
tatccttccctatgtgagctggctcatgtgttgtcagtggatggcccagtcagacaacga
ttagatactctggccggggagctagcaagggctgctgataaagagcttcaggtggtcgtg
gactcaatggtgtctctgtgccgggagctgtgtcctatgtcctgcttagctgccgagaga
ctcagcccgcatctctcttccatatctgagcaggtttctatccctcgatctgctatacgt
aacgcactcatggaacgagcatctgaggatatcaataaagccctcgaggacgtgaaattg
tccgtagtgtcctatttaacaaattccatcgtggatcagattctacaagaactctacaca
aaccataaaacactggtactgctgcgggaggtgtctcagacgaagcgttgggatgatatg
gagaaggaaagatatacagtcagacagtccagagttgtggcgtctctagaatttccggat
gaagacgtgggtgtcagcctgggaatagacaccatggctataaagaagcggagctctaga
accagaagaattcgtcccgtttccaccagaccaagtctgggagacgagcccagttcctcc
cccacaccctctgctcctgcaccctctgcacatctttcccactcggcatcatgggagtgc
ctgtccacccttcccactaacggctcgcccttgcgccatgtgacgcacgtaaggccccgt
cctccacggagacacagagcagttcaccttcccccagaatctcaatactttgggaatggc
agcgtcaatacgctggatgatggattgctggatttctacaacaagagagtactccctgac
agtcagttgtcatccatccaccaagctcaatcactaaggcggaaaaagagacgcagcatg
ttgtcgattttctcgggtttccgcaaaaaccgcaactctaccttatccaaccaggagtta
gacagcacttcagagaatctctactcgatgattcagcacccaaaggatggtggaagagca
gataactctgtgcatggagcgaacgggaccatgccctcacctcgggtcagagagggtgtt
cctgtgcaaggcttgaggcccaccagcccctcctacctcattcagcgacagtccacagat
ctggtcagtatggtgtacagctgcattggtgcagacattgaggaatcagatgccagcagc
acctgtgacaccaaagcgatggatgaagttagtgacaagtcagccgggatatcggggggt
ccgccagacagtggcacaaacggccatgaggcgtcctccaagcagcaggcagacaggctg
gcagagacgggcaggcaggagaggattgtacctctgaccgggctgcagactgagtctgac
ggggatactcagtatctggacaaaggcgtaactgcggctccctgtggtctgaggcctgag
ccgccacctcagatcaccaagcccagtcttgctgccatgaggcagagacatcttcaggag
agtttagcagaggcaggaaggttggtaatggaagagcagaatgaaagaaaagttgaggaa
aaagtgaggacgcaaggacccgagggacaacgtcccctcattcctaccaagcctagtctt
gacctctcaagagacaaaacgtccccagaaacccccaagatttctcccaaagtctcaccc
attagtcaagaaggacatgagacccacaggagtgcacctcttgcccagtctgtcagtcat
gaggaagtcaccagtcgagagtggaggagcccaccaccacctgtcaagcctgaaattgat
tcaactgcagacagtgctgtttgtgaaggtaaaaatgaggaccgcaatggatttcctgta
acatcacgtggcacaagaaagtccaactcttttgacacaggcatggagcggggcggtcac
tatgatctggagaggttttcagatcccagactctctgtgaaaaaaaataatttaccccat
tacagaaacagatctttggactaccccactggcaccagctgttatgaaagtccccaactt
ggtaacaaagatgtgttatga
DBGET
integrated database retrieval system
