Syngnathoides biaculeatus (alligator pipefish): 133511217
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Entry
133511217 CDS
T09681
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04144
Endocytosis
sbia04517
IgSF CAM signaling
sbia04520
Adherens junction
sbia04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133511217
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133511217
09144 Cellular community - eukaryotes
04520 Adherens junction
133511217
04530 Tight junction
133511217
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbia01009
]
133511217
Protein phosphatases and associated proteins [BR:
sbia01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133511217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
133511217
NCBI-ProteinID:
XP_061695917
LinkDB
All DBs
Position
13:complement(16838072..17035894)
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AA seq
1414 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIHVHALVQQAVMRYKKAIAKDTSYWLQVHRLEHGDGGILD
LDDVLCDVADDKDRLIAIYDEQEPHHGGDGTSASSTGTQSPDLFTTVDLSTGGGASAFQP
YQAASEIEVTPSALRTNMPLHVRRSSDPALLCLNGPFSGGGVDSRAQGEEPPSRKNPTRW
STTAGFLKARHASATNSLERKGKGLDTYRSLPRDAGTWANQREFQRETARSSLSANHPMV
DRWLERQEQEDEAREQENGRIEPVGRAESCLDHTASTPRSLEDIIKVVEVTNDGGPLGIH
VVPFSGRDRRTLGLLVKRLERGGKAQQQSLFQENDCIVRINNGDLRNIRFEQAQNMFRQA
MRSSVILFHVVPSSLKAHYEHLSQAERNPAYSSGRFSADSASDGTDPAPHRMSRHGSQKH
PNTHPHQDQPDGYPPSVHAPVVSAAKPPTGQIQSPQKGQTSTLTPGYNKKVGRRLNILLK
KGPEGLGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVNSIDLNGRRQE
EVVSILRATPMGGTVGLLILRQEDTVLPQEAQSSEVQMQMQSLRDLKPEEDELVLTPDGT
REFLTFEIPLSDSGSAGLGVSVKGNRSKENHADLGIFVKSIINGGAACKDGRLHVNDQLI
AVNSESLLGKTNQDAMETLRKSMSTEGNKRGMIQLIVARRVNKRSQEAPGGPLGPQQSTN
TLSLDEHERRISHSLYGALEDLDDNLMPRQGMMPRTVGTYQLSPTVNMPQDDTVIIEDDG
PPLLPPHLSDQSSSSSHDDVGGSGGGGGSAGNGGVFSTDVTPSWAREIPAPKDSSQTPNE
SHAADAAFQREGFGRQSMSEKRTKQFGDASQLDIIKTRKSKSMDLVADEINLSRRPDINT
GSSTRDVGPSLGLKKSSSLESLQTAVAEATLNGDLPFHRPRPRIIRGRGCNESFRAAIDK
SYDRPAATEDYDEGMETLEEDTEESSRSGRESVSTVAELAPLSPGGEKTMSTTLINGSSR
GKDDKKKDKGGKDKKKGDAQKDKEKDKEKGKAKKGMLKGLGDMFRFGKHRKDDRMERKGS
SKWRPEETHVSDEETMKMKMEQERIQAKTRELRERQARERDYAEILDVSRSPERSSEEEH
AYVGVTLLNNSGHNSPRSDHHHHGPHSPRNDHDQFPRLHHHHAHQHSDSLYTQVSKVLPE
RPPSADSNRVAPSNHDRIQRLRQEFQQAQNLPDDGDDRRCAFGFEQPWSNGPGAAAAGQQ
PGRHSVSVEVQMQRQRQEDSFSQAQRQYSSLPRQPRKNPSSISQDSWEKSYPANEVFQTA
KDNPRYSSYHQGSRNGFPSTANVNARVLLEAQELLRQEQRRRELEAKDRASPRDALTSPM
ASPKGPYRHDVPPSPSQLARLNRIGSEKGRLFYS
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggtgtgcttcggaaggacgcgcgtggtcgtgccgtgcggggacggtaac
atccacgtgcacgcgctcgtccaacaagccgtcatgaggtacaaaaaggccatcgccaag
gacaccagctactggctgcaggtgcaccgcctggaacacggagatggtggcatcttggac
ctggatgacgttctgtgcgatgtggcagatgacaaagaccggctgatcgccatctatgac
gagcaggaaccacaccatggcggtgacggcaccagtgccagttccactggcacccagagc
ccagacctcttcaccaccgtggacctcagcacgggcggtggtgcctctgcctttcagccc
taccaggcggctagcgaaatcgaagtcacaccgtcagccctgcgcaccaacatgcccctg
cacgtccgccgcagtagcgaccctgctttgctgtgtctcaatgggccattcagtggtggt
ggcgttgattcgcgggcccaaggggaagaacctccgtcgcgaaagaacccaacccgatgg
tccaccacggccggcttcttaaaagcgcgccatgcctcggccaccaatagcctggagaga
aagggtaaaggcttggacacgtaccgcagcctgcccagggacgctggaacatgggccaat
cagagagagtttcagagggagactgcacgctcatccctcagtgccaatcacccaatggta
gaccgatggttggagaggcaggaacaggaggacgaggcaagagagcaagaaaatggtcgc
attgagccagtgggcagagctgaatcgtgcttggaccacaccgcctccacccctaggtct
ctcgaagacataatcaaagtagtggaggtgacaaatgacggcgggcccctgggaatccac
gtggtgcctttcagtggcagagaccgcaggactcttggcttgttggtcaagcgtctggag
cgaggtggcaaagcccagcagcagtccctcttccaggagaatgactgtatcgtcagaatc
aataacggagacctccggaacattcgctttgaacaagcccagaacatgttccgccaggcc
atgcgttcttccgtcattctgttccacgtggtgccgtcttcgttgaaagcccactacgag
cacctatcccaggccgagaggaatccagcatactcgtcaggccgcttcagcgccgactct
gcatccgacggcacggatcccgcgcctcataggatgtcccggcacggctcgcagaagcac
ccgaatactcacccgcatcaggatcaaccagacggctacccgcccagcgttcacgcacct
gttgtctccgccgccaaacctcccactggtcaaatccaatcgccacaaaaggggcagact
tccactctgactcctggatacaacaagaaggttgggaggaggctcaatattctgctcaag
aaagggccggaaggattgggcttcagcatcacgtcgcgagacgtccccatcgggggctcg
gcgcccatctatgtcaagaacattctaccgcggggagccgccattcaggatggacgcctc
aaggctggcgacagattactggaagtcaacagcatcgacttgaatggtcgcaggcaggag
gaggtggtgtccatcctcagggccacgcccatggggggcacagtggggctgctgatcctc
cgccaggaagacaccgtactccctcaagaagcacagagcagcgaggtccagatgcagatg
caaagcctcagagatttgaagcctgaggaagacgaactcgtgctgacgccggatggcact
cgtgagttcctgacctttgagattccgctcagcgactcgggctctgcgggattaggtgtc
agtgtcaaggggaaccgctccaaggagaaccatgctgaccttggcatcttcgtcaagtcc
atcatcaacggaggcgctgcgtgcaaggatgggcgcctgcacgtgaacgaccagctgata
gctgtcaacagcgagtcgttgctgggcaagaccaaccaggacgcaatggagacgctgcgc
aagtccatgtctactgaggggaacaaacgcggcatgatccagctcatcgtggccagacgg
gtcaacaagaggagccaggaggcaccaggggggcctctgggacctcagcaaagcacgaac
actttgtctctagacgagcacgaacgtcgtatctcccactccctgtatggcgctctggag
gatctggatgacaacttgatgcctcgacaaggcatgatgccacgcacagttggcacctac
cagctttcgccgactgttaacatgccgcaggacgacacggtcatcattgaggatgatggg
ccgccgctcctccctcctcacttgtcggatcagtcgtcgtccagctcccatgatgacgtc
ggtgggagtggaggtggaggtggcagtgctggcaacggcggcgtcttcagcactgacgtg
acgccgtcctgggcacgagagatccctgctcccaaggacagctcgcagactccgaacgag
agccacgccgccgacgctgccttccagcgggaaggtttcggccgccagagcatgtcggag
aagcgcaccaagcagtttggagatgcctcccagttggacatcatcaagacgcgcaaatcc
aagagcatggatctagtagccgacgagattaacctcagccgtcgtcctgacatcaacaca
ggttcctccacgagggacgtgggcccgtcattgggcctgaaaaagtccagctccctggag
agtctccagacagccgtggccgaggcgacgctaaacggcgaccttccttttcatcgtcct
cgtcctcgcatcatccggggccgtggctgcaacgagagtttccgcgccgccatcgataag
tcgtatgatcgtccggctgccacggaagactacgacgagggcatggagacgctggaggag
gacaccgaggagagttctcgctctggtagagagtccgtgtccacggtggccgaattggcg
ccactgtcgccgggcggagaaaagacaatgtcgacgacgttgatcaacggcagctcgaga
ggcaaagatgacaaaaagaaagacaaaggcggcaaagacaagaagaagggtgatgcgcag
aaagacaaagaaaaagacaaggagaagggaaaagcgaagaaaggaatgctcaaaggactc
ggagacatgttcaggttcgggaagcaccgcaaagatgacaggatggaacgaaaaggttcc
agcaaatggcggccagaggagacgcacgtttcggacgaggagacgatgaaaatgaagatg
gagcaggaaaggatccaggccaagacgcgcgaacttcgtgagcgtcaggcgcgagaacga
gactacgccgagatcctggacgtgagccgctcaccagagaggtcctcggaggaggagcac
gcgtacgtcggggtcaccctcctcaacaacagcgggcacaacagcccccgcagtgaccac
caccaccacggtccacacagcccccgcaatgaccacgaccagttcccccgcttacatcat
caccatgcgcaccagcactcggactccctctacacacaagtcagcaaggtgctcccagag
agacctccttctgcagacagcaaccgcgtggctccaagcaaccacgaccggatacagagg
ctgaggcaagagttccagcaggcgcagaaccttccggacgacggcgacgatcgccgatgc
gctttcggcttcgagcagccctggtccaatggtcccggcgcggcggcagcgggacagcag
ccgggtcgtcactcggtgtcggtggaggttcagatgcagcgtcagaggcaggaagattcc
ttcagtcaagctcagcggcagtacagctcactgccacgccaaccgcgaaagaatcccagc
tccatctctcaggactcttgggaaaagtcgtacccagccaacgaggtcttccagacagcc
aaagacaatcctcgttactctagctaccaccagggatcccgcaacggcttccccagcacg
gccaacgtcaatgccagggtccttctggaagcccaggagcttctcaggcaggagcagaga
cggcgagagctggaagccaaggaccgagcctcccccagggatgccctgacctccccaatg
gcgtcccccaaaggcccgtaccgccacgatgtgccgccttcaccctctcagctcgccaga
ctcaaccgtattggctcagagaaaggacggctcttttattcctga
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