Syngnathoides biaculeatus (alligator pipefish): 133511220
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Entry
133511220 CDS
T09681
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133511220
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
133511220
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-Di19
Homeodomain
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_15
Homez
ICAP-1_inte_bdg
Motif
Other DBs
NCBI-GeneID:
133511220
NCBI-ProteinID:
XP_061695927
LinkDB
All DBs
Position
13:16298017..16331330
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AA seq
1111 aa
AA seq
DB search
MADGPRCKRRKQANPKRSSVTNVNGGLEASSSDSDDDDKLHIVEDESPPDAEESAVARGD
RRDAKNATDANNTVLTHNGAWNGVKEECASKEEEEEEEDEDEEDGKGGERRGDVEPQRGM
KKELAVEELLQKGDTAVIYPEAPDDQQSPAETAGVDENGTPDGLQLHTCPYCSRGYKRNA
SLKEHIKYRHETSEDNYRCSHCSYTFTYRSQLERHMSHHRGSKEQGRHVQPSGGGGGSGG
GARKFKCTECFKAFKYKHHLKEHLRIHSGEKPYECANCKKRFSHSGSYSSHISSKKCVSV
ASAPNGLSRKSVKPLPSSADIPGVAVASGRMVLKEKPESKPLQEQLPVTQIKSEATELPC
KPAVAAAPSANGAAPQPQSLSQGVAMVLPTVGLVPPININLSDLQNVLKLALDGNVLRQV
LGTANGATVQGKPGIVVQQPQQQIISLPAFVDHDGTTKIIINYSIGPAPATTAATTATTT
QPMPLFVKNNLVPAAPIPTKTDKPPTPKVDLSLVKEEPEESVLITETKTDQVKSIKTEDA
EVLPPDTGSSTCSLCDECPENLEALHLLQHHKAANGEAVDSAALDPSFAALLSDAGVTLA
QEPAVDDLLTLLKTYFASNANPDQEELEKLSDSVRIPVNVVRKWFAKMNSGKKICQDEEL
SKKTEPLNCESEATKQVSCQSPSDSPSLNTSDLVIIKSEPEDPETLDSQAEPLDLSLPKQ
VPTPTSAAPPEDTPTSKKPQQPVSLACLRKEQVGGRTIYVATPQTHRTAVNIVPTSQLPT
LVAITGQGPVGCLGTIGGSAKRTILIPQLTYTYAHSAGTAAKTVVLNGHKTPETSSDGAA
EEQREXVVMKKPRLENGVYSCDLCNKAFQKGSSLLRHKYEHTGKRPHECPVCHKAFKHKH
HLIEHSRLHSGEKPYQCNKCGKRFSHSGSYSQHMNHRYSYCKRDGSDYGSSPDADATPAT
VDAGSPSAALDSDVGESEDDDEAMCVDDIRVVQVDDGECEIYEGNFDDDDDDDEDDGDDE
EEDNVEKGVEKEEAHEEEKEKNLDVDEFACQVVEVELKDEQTPESAVEDKADKAEAAGVN
LEQMADCTYKRIRDWSDSEESSDDQAVTDSK
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggccaacccgaagcggagcagcgtg
acgaacgtaaacggcggcttggaggccagcagctccgactcagacgatgacgacaagcta
cacatcgtggaggacgaaagcccgccggacgctgaagagtccgcagtggcgaggggggac
cgccgtgacgccaaaaacgcaacagatgccaacaacacagtattaacacacaatggagct
tggaatggagtgaaagaggagtgtgcgtccaaagaagaagaagaagaagaggaagacgaa
gacgaagaagatgggaaaggaggagaaagacgaggagacgtggagccacagcgtggaatg
aagaaagaattggcggtggaggagctcctccagaaaggagacacggccgtgatctaccca
gaagccccagatgatcagcagagtcctgcggaaacggcgggcgttgacgaaaacggcacc
ccagacggccttcagctgcacacgtgtccgtactgctcgcgaggctacaagcgcaacgct
tcgctcaaggaacacatcaagtaccggcacgagaccagcgaagacaactacagatgctct
cactgcagctacaccttcacgtaccgctcgcagctcgagaggcacatgagccaccaccgg
ggcagcaaggagcagggacgtcacgtgcagccttccggtggcggcggcggaagtggagga
ggagcccgcaagtttaagtgcactgagtgcttcaaagccttcaagtataaacaccacctg
aaggagcacctgcgcatacacagtggtgagaaaccatacgagtgtgcaaattgcaagaag
cgattctcacactcgggctcgtacagttcacacatcagcagcaagaagtgcgtgagcgtg
gccagcgcccccaacggcctctcgcgtaagtccgtcaagccactgccgtcgtctgctgac
atcccaggggttgccgtcgcctctggccgcatggtcctgaaggagaagccggaaagcaaa
ccccttcaagagcagctccccgtcacgcaaattaaatcggaagcaaccgagcttccctgc
aagccggccgtggcggcggcaccatcggccaatggggcggcgccgcagccgcaatcgctg
tcacagggtgtagctatggtgctccccacagtggggctggtgccgcctatcaacatcaat
ctgagtgatctgcagaacgtcctcaaattggctttggatgggaacgttttgagacaggtg
ctgggtactgctaatggggctacagtccagggcaagccgggcattgtggtccagcagcct
cagcagcagatcattagcctgcccgcctttgttgaccacgatgggaccaccaagataatc
atcaactacagcatcggacccgcgcctgccaccactgctgctactactgctaccaccacc
caaccaatgcctctttttgtcaaaaacaacctggtcccagctgcacccatcccgaccaaa
actgacaagccacccactcccaaggttgacctcagcctggtgaaggaggagcccgaagag
tcggtgctcatcacggaaacaaaaacagaccaagtgaagagcatcaagacagaagatgct
gaagtgctcccacccgacaccggatccagtacttgttcactgtgcgacgagtgccctgag
aacctggaggcgctgcacttgctccagcaccacaaggcagccaacggggaggctgtggac
tcggccgccttggacccgtctttcgctgccttgctcagcgatgccggtgtgacgttggca
caggagccagctgtggatgatctcctgaccctccttaagacctacttcgcctccaatgct
aaccctgaccaggaagagctagaaaagctatcagactctgttaggattcctgtgaacgtg
gtgcggaagtggtttgccaaaatgaattctggaaaaaaaatctgtcaagacgaggagctg
tccaaaaagactgaacccctaaactgtgagtcagaggccaccaaacaagtctcgtgtcaa
tccccatctgattccccatcgttgaacaccagcgacttggtcatcatcaaaagcgaacca
gaggacccagagactctggactcccaggctgaacccttggacctatccctcccgaaacaa
gttcccactcccacatccgctgcacccccagaggacacgccaacttccaaaaaaccacag
caacctgtgtccctagcctgcctaaggaaggagcaggtgggtggtcgcactatctacgtg
gccacgcctcagacgcaccgaaccgccgtcaacatcgtgcccacctcacagctgcccact
ttggtggccatcacaggtcaggggccagttggctgccttggcaccattgggggctcggcc
aagcgcaccattcttatcccacagctcacctacacctatgcccactcggctggtactgcg
gccaagacggttgtgctcaatggacacaagacaccggaaacgagctccgatggcgcggcg
gaagaacaaagagagnatgtggtgatgaagaagccacgtctggaaaacggcgtctactct
tgcgacctgtgtaacaaggccttccagaaggggagctccttgctcaggcacaaatacgaa
cacacaggaaagcgtcctcacgagtgcccggtgtgccataaggccttcaagcacaagcat
catctgattgagcactcacgcctgcattccggcgagaaaccctaccagtgcaacaagtgc
ggaaagcgcttctcgcactcgggctcctactcgcagcacatgaaccaccgctactcctac
tgcaagcgggacggctccgattatggctccagtccggacgccgacgccactcccgccaca
gtcgacgcgggaagcccgagcgccgcgctggactcggacgtcggcgagagcgaggacgat
gacgaagccatgtgtgtcgacgacatccgggtcgtgcaggtggacgacggcgagtgcgag
atctacgagggcaacttcgatgatgatgacgatgacgacgaggacgacggtgatgatgaa
gaagaagacaacgtagagaagggtgttgaaaaagaagaagcgcatgaagaagaaaaggag
aaaaacctggatgtggatgagttcgcttgccaggtggtcgaggtggaactgaaggacgag
caaacgccggagtccgctgtcgaggacaaggcggataaggcagaagcggccggcgtcaac
cttgagcagatggcggactgcacttacaaacgcatcagggactggtcggacagcgaggaa
tcctccgacgatcaagctgtgacggacagcaaataa
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integrated database retrieval system
