Syngnathoides biaculeatus (alligator pipefish): 133511346
Help
Entry
133511346 CDS
T09681
Symbol
rnf31
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31 isoform X1
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04217
Necroptosis
sbia04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
133511346 (rnf31)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133511346 (rnf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133511346 (rnf31)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
133511346 (rnf31)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
133511346 (rnf31)
Multi subunit type E3
LUBAC complex
133511346 (rnf31)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_HOIP
UBA_RNF31
E3_UbLigase_RBR
IBR_1
PUB
IBR
Zn_ribbon_RanBP
UBA
RNF220
Motif
Other DBs
NCBI-GeneID:
133511346
NCBI-ProteinID:
XP_061696148
LinkDB
All DBs
Position
13:complement(24529855..24687255)
Genome browser
AA seq
1143 aa
AA seq
DB search
MLLPALNFFALLKFKKKKKIKLLVAGPGSLSVLFVVDSRMPSLSEQLQEARSQAEVCLYS
GGRVMEVRAAVLDMANLPLPPCSKYHYVSAETMVIENSFGSNRKETLASLQHLSTALNIL
EKYGCNLTNPNRPKYWRTVKHNNPVFRATVDAIQGGRTVLCLYGYSNQQADGLSFPDDVT
DPDVGRVAAVTLEVMSLRMELEMLIKETHPHPEFYERIIPTLRHKDVGLNTDAVVSRSSS
SSSKHHSDSQSQLLTFPLDDHSMRESGHCCSLSSDHQSLKPLQVMLPPFKKHPENCTICG
IFRITVHCLSCLQGMCLECDRLYHSYPERAKHHRTAVTSSASFTATSKSGNNKSSSTWHC
LHCTKVNSSQDMLCEGCECPHYESLSSAGDDSPPATITEWQCRSCTVVNAPSSILCEVCE
RPRLATRPPVTPSRPPITPARPPAPVLGMPGDPDSQWVCQFCTFLNYSPATVCEMCDLAR
PEPAPLPSKLRPPFPVRRVPALPVKPKELTQEDSNSCRQQRMKEDGLKLIQLIRDGERNG
VSPEEVYTCMKVARDTNILPCKWLKSELAQQLDKISLLSAMFSHQSIRSCEASAEDSGKV
IAAVQISREEAKQAWLTAGGDSERAARQALHDRLTKVTMLCSLGFTDEAHCHEVLRQSGG
EVRGALAFLQRPLLQPFHERIWSDKPEPTVDIHHPDKQRVCRRLLAVYDLPSWGRCELAL
SLLHEHNAPYSLEDVVQAVRESHDREFIKRVLAKECPICLSVFPHSKMQSLTSCQCSVCC
DCFQQHFTIAIRDKHIRDMVCPVCWEPDINDPEDLNSYFSTLDIQNCFNPATLCQTTRWC
LPVWLRSLRECLEPEVYELFHKKLTEQALIKDPKFLWCCHCSYGFIYDGDQLKVTCFQCH
NSFCAQCKKPWESQHAGLSCEQYQSWKRENDPEYQKQGLAGYLRDNGITCPNCRFQYALS
KGGCMHFCCSQCRYQFCSGCNNPFHTTCAVDQCTVSGLHAHHPRDCLFYLRDWEPSRLQA
LLENNGVTYNTDPTPGTQTGLCGVLEQKDDGAQQSDSACGALTQIGHAGLCEKHYREYLV
SLINSYSIDPARLYSSNELLLACRRYKVDDTHRDGEDGFSYYRRLVEKLMEEVPLGDKVP
RKK
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttccagctctgaatttcttcgcccttctgaaatttaaaaaaaaaaaaaaaatc
aagctcctcgttgccggaccggggagtctctccgttctcttcgtcgtggattcgaggatg
ccctccctatcagaacagttgcaggaggcacgcagtcaggcagaagtgtgtttatactct
ggtggcagggtgatggaagtgcgggctgctgtgttggatatggctaatcttcctttgccg
ccatgctccaaataccactacgtttcagcagaaactatggtgatagaaaacagctttggc
agtaacagaaaagagacacttgcatcattgcagcacttatctacagctctgaacatcctg
gaaaagtatgggtgtaacctaacaaatcccaaccgaccgaagtattggagaactgtcaag
cacaacaatccagtgttcagggccacggttgatgctatccagggaggaaggacagtgctt
tgtctctatggttattccaatcagcaggcagatgggcttagcttccctgatgatgtgacc
gatcctgatgttggtagagttgccgcagtaactttggaggtgatgagtctaaggatggag
ctagaaatgctcattaaggagactcatcctcatccagaattctatgagaggatcattcct
acactaagacacaaggatgtgggcctgaacacagatgctgtagttagccgttcatcttcc
agctctagtaaacatcattcagacagtcagtcccagttgctcaccttccctctcgacgac
cattccatgagggagagcggccattgttgctcactctcctccgaccaccaaagtctcaag
cctcttcaagtcatgttaccacccttcaagaaacacccagaaaactgcactatctgtgga
atatttcgcatcactgtccactgcctgagttgcctccaagggatgtgtttggaatgtgat
agactgtaccattcttaccctgaaagggccaagcaccatcgaacagctgtcacatcctcc
gcctctttcactgcaacttctaaaagcgggaataataaaagttcttccacatggcattgc
cttcattgcacaaaagtcaactcatcccaagatatgttgtgtgagggttgtgagtgccct
cactatgaatcactcagctctgctggagatgattctccaccagctaccatcacagagtgg
cagtgtaggagctgtacagtggtcaatgcacccagcagcattctgtgtgaggtgtgtgaa
agacctcgtttggctacacgacctccagttacgccttcacgccctcctatcaccccagcc
agaccaccagcacctgtactggggatgccgggggatcctgacagccagtgggtgtgtcag
ttctgtacatttctcaactactcacctgccacagtgtgtgagatgtgtgacctagcccgt
ccagagcccgcacctttgccatcaaaactccgccctcctttcccagttcgacgagtccct
gctctaccagttaaaccaaaagaactgacccaagaagactcaaattcctgtcggcagcag
cgaatgaaggaggatgggctgaagctaatacagctgattcgagatggggagaggaatggc
gtcagcccagaagaggtgtacacatgcatgaaggtcgcaagagataccaacattctgcct
tgcaaatggttgaagtcagagctggctcagcaattggacaagatcagcctgttgtcagca
atgttctcccatcagtctatcaggtcttgtgaggcctccgctgaggattctggaaaagta
attgctgcggtccagatttccagagaagaagccaaacaggcctggctgacagctggaggt
gactctgagagggctgccagacaagccctgcatgacagactcaccaaagtaactatgctg
tgctccttgggctttactgacgaagctcattgtcatgaggttttgaggcaaagtgggggg
gaggttagaggtgcacttgcttttctgcagcgcccccttctgcaacccttccatgaacgt
atttggagtgataaacccgagccaacagttgacatccatcatcctgacaaacagcgtgta
tgtcggaggttactagctgtatatgatctacccagctggggccgctgtgagctagcactc
tctctccttcacgagcacaatgccccctactctctagaggatgtagtacaggctgtacga
gagtctcatgacagggagttcatcaaaagagtactggctaaagaatgtccaatctgcctt
tctgtctttccccatagtaagatgcagtccctgacatcgtgccagtgttccgtgtgttgt
gattgttttcagcagcatttcaccatcgctatcagggacaaacacatcagagacatggtg
tgtccagtctgctgggaacctgacatcaatgaccctgaggacctcaacagctatttctcc
accttggacatccagaattgcttcaaccctgccacattgtgccaaacaacaaggtggtgt
ttgccagtgtggctacgttcgctgagagaatgtctggaacccgaagtatatgagctcttt
cataagaagctgacagagcaggccctgatcaaggacccaaagttcctttggtgctgccat
tgttcgtatggattcatctatgatggagaccagcttaaagtcacctgttttcaatgtcac
aacagtttttgtgctcagtgcaaaaagccatgggaatcccagcacgctggtttatcctgt
gaacaataccagtcctggaaaagggaaaatgatccagagtatcagaaacaaggcctggct
ggctatttgcgagacaatggcattacctgtcctaattgtcggttccagtatgcactgtct
aaagggggctgtatgcacttctgctgctctcaatgtcgttaccagttctgcagtggttgc
aacaacccattccatacgacctgcgctgtggatcagtgtactgtatctggactccatgcc
catcaccccagggactgtctattctatttgagagactgggaaccttctagacttcaggca
ttattggagaacaatggtgttacatacaatactgaccccactcctggaacacagacagga
ctgtgtggagtgctcgagcagaaggatgatggagcccagcagtctgattcagcttgtgga
gcactgacccaaattggacatgctggactctgcgaaaaacattacagagagtacctggtc
agtttgatcaacagctactccattgacccagcccgactctacagctccaatgaactgctg
ctggcctgcaggaggtacaaggttgatgacacccacagggatggagaggatggattcagc
tattacaggagactggttgagaaactaatggaggaagtcccactgggtgacaaggtccca
cgcaagaaataa
DBGET
integrated database retrieval system
